CU103051 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU103051
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Nascent polypeptide-associated complex subunit beta
Location	Chr1 : 3395341 .. 3397665 (-)
Sequence length	681

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTCTTCGCTCTTCATCTCTTTCTATTCCTCGTCTTAAATCTGTTCTCCCCTTTGGTTCTTCGATTCTTCTTTTCTTGGACTCTTTTATTCTTTCCTCATGGTTGGCCTTATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTCCAGATAACTTGGACAACTTGCGTAAATTGGACTAGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTTCGAAGCTCCCGCAGAAGAAAATCGTTTCTTCTTAGATAGATCCTTTTGAAAGAGAGGAGTGTTGTTTTTATGCCGTTTTATACTTTACCTAAGAAGTTAGACTTACAAGACAAGTTTTTATGA

Library


Library category	ESTs
fruit (8DPP) library	1
gynoecious flower library	3
Cucumber leaf library	1

Homology

[Close]

BLAST of CU103051 vs. Swiss-Prot
Match: BTF3L_ARATH (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana GN=At1g73230 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.7e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M++E+L K+A+                 HKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGP
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

HSP 2 Score: 43.9 bits (102), Expect = 2.7e-03
Identity = 22/34 (64.71%), Postives = 23/34 (67.65%), Query Frame = 1


Query: 460 EQFKQQVPGAGGDPKNAQEE--DDDVPELVEGET 519
           EQF++Q PGAG  P   QEE  DDDVP+LV GET
Sbjct: 117 EQFQKQAPGAGDVPATIQEEDDDDDVPDLVVGET 150

Query: 520  556
           
Sbjct: 177  150

[Close]

BLAST of CU103051 vs. Swiss-Prot
Match: BTF3_ARATH (Basic transcription factor 3 OS=Arabidopsis thaliana GN=BTF3 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-35
Identity = 78/106 (73.58%), Postives = 83/106 (78.30%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M++E+L K+A+                 HKT TTDDKRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLGP
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

HSP 2 Score: 31.6 bits (70), Expect = 1.4e+01
Identity = 18/34 (52.94%), Postives = 20/34 (58.82%), Query Frame = 1


Query: 460 EQFKQQVPGAGGDPKNA--QEEDDDVPELVEGET 519
           EQF++Q  G G        +E+DDDVPELV GET
Sbjct: 117 EQFQKQASGEGNAASATIQEEDDDDVPELV-GET 149

Query: 520  556
           
Sbjct: 177  149

[Close]

BLAST of CU103051 vs. Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.9e-21
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M+QE+L K+ +                 H+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMI 60

Query: 170 KDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 229
           KDD  VI FNNPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLG 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  425
           
Sbjct: 301  106

[Close]

BLAST of CU103051 vs. Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 2


Query: 107 LMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNI 166
           +M+QE+L K+ +                 H+T T DDK+LQ +LK++GVN I  IEEVN+
Sbjct: 49  IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 108

Query: 167 FKDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 226
           F +   VI FNNPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG
Sbjct: 109 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLG 155

Query: 227  286
           
Sbjct: 169  155

Query: 287  346
           
Sbjct: 229  155

Query: 347  406
           
Sbjct: 289  155

Query: 407  425
           
Sbjct: 349  155

[Close]

BLAST of CU103051 vs. Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=1 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 2


Query: 107 LMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNI 166
           +M+QE+L K+ +                 H+T T DDK+LQ +LK++GVN I  IEEVN+
Sbjct: 47  IMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNM 106

Query: 167 FKDD-VVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLG 226
           F +   VI FNNPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG
Sbjct: 107 FTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLG 153

Query: 227  286
           
Sbjct: 167  153

Query: 287  346
           
Sbjct: 227  153

Query: 347  406
           
Sbjct: 287  153

Query: 407  425
           
Sbjct: 347  153

[Close]

BLAST of CU103051 vs. TrEMBL
Match: A0A0A0LPY4_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G031860 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 93/110 (84.55%), Postives = 93/110 (84.55%), Query Frame = 2


Query: 98  MVGLMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEE 157
           MVGLMDQERLRKIAS                 HKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 158 VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 217
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 110

Query: 218  277
           
Sbjct: 121  110

Query: 278  337
           
Sbjct: 181  110

Query: 338  397
           
Sbjct: 241  110

Query: 398  428
           
Sbjct: 301  110

[Close]

BLAST of CU103051 vs. TrEMBL
Match: A0A0A0LPY4_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G031860 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1


Query: 460 EQFKQQVPGAGGDPKNAQEEDDDVPELVEGET 519
           EQFKQQVPGAGGDPKNAQEEDDDVPELVEGET
Sbjct: 121 EQFKQQVPGAGGDPKNAQEEDDDVPELVEGET 152

Query: 520  556
           
Sbjct: 181  152

HSP 2 Score: 160.6 bits (405), Expect = 2.2e-36
Identity = 88/124 (70.97%), Postives = 94/124 (75.81%), Query Frame = 2


Query: 56  FFDSSFLGLFYSFLMVGLMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQST 115
           FF SS +G   S L V  M+ E+L K+A                  HKTTTTDDKRLQST
Sbjct: 22  FFSSSGVG---SRLTVAKMNVEKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQST 81

Query: 116 LKRIGVNAIPAIEEVNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIIN 175
           LKRIGVNAIPAIEEVNIFKDD+VIQF NPKVQASIAANTWVVSGSPQTKKLQD+LPGIIN
Sbjct: 82  LKRIGVNAIPAIEEVNIFKDDLVIQFVNPKVQASIAANTWVVSGSPQTKKLQDLLPGIIN 141

Query: 176 QLGP 235
           QLGP
Sbjct: 142 QLGP 142

Query: 236  295
           
Sbjct: 202  142

Query: 296  355
           
Sbjct: 262  142

Query: 356  415
           
Sbjct: 322  142

Query: 416  428
           
Sbjct: 382  142

[Close]

BLAST of CU103051 vs. TrEMBL
Match: M0U8X4_MUSAM (Nascent polypeptide-associated complex subunit beta OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 39.7 bits (91), Expect = 5.7e+00
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 1


Query: 460 EQFKQQVPGAGGDPKNAQEEDDDVPELVEGET 519
           E  ++Q PGAG   K  Q++DDDVPELV GET
Sbjct: 153 EHLQKQAPGAGAPAK--QDDDDDVPELVPGET 182

Query: 520  556
           
Sbjct: 213  182

HSP 2 Score: 158.7 bits (400), Expect = 8.4e-36
Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M++ERL K+A                  HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 14  MNKERLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 73

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 74  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 119

Query: 230  289
           
Sbjct: 134  119

Query: 290  349
           
Sbjct: 194  119

Query: 350  409
           
Sbjct: 254  119

Query: 410  428
           
Sbjct: 314  119

[Close]

BLAST of CU103051 vs. TrEMBL
Match: A0A0B0MWR1_GOSAR (Nascent polypeptide-associated complex subunit beta OS=Gossypium arboreum GN=F383_27392 PE=3 SV=1)

HSP 1 Score: 35.8 bits (81), Expect = 8.3e+01
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 460 EQFKQQVPGAG-GDPKNA----QEEDDDVPELVEGET 519
           EQF++Q P AG GD   A    +E+D++VP+LV GET
Sbjct: 130 EQFQKQAPAAGAGDGTGAATTQEEDDEEVPDLVPGET 166

Query: 520  556
           
Sbjct: 190  166

HSP 2 Score: 158.7 bits (400), Expect = 8.4e-36
Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M++ERL K+A                  HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNKERLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

[Close]

BLAST of CU103051 vs. TrEMBL
Match: A0A0D2R4N2_GOSRA (Nascent polypeptide-associated complex subunit beta OS=Gossypium raimondii GN=B456_004G264900 PE=3 SV=1)

HSP 1 Score: 35.8 bits (81), Expect = 8.3e+01
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1


Query: 460 EQFKQQVPGAG-GDPKNA----QEEDDDVPELVEGET 519
           EQF++Q P AG GD   A    +E+D++VP+LV GET
Sbjct: 117 EQFQKQAPAAGSGDGTGAATTQEEDDEEVPDLVPGET 153

Query: 520  556
           
Sbjct: 177  153

HSP 2 Score: 158.7 bits (400), Expect = 8.4e-36
Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           M++ERL K+A                  HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNKERLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

[Close]

BLAST of CU103051 vs. NCBI nr
Match: gi|449439237|ref|XP_004137393.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 93/110 (84.55%), Postives = 93/110 (84.55%), Query Frame = 2


Query: 98  MVGLMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEE 157
           MVGLMDQERLRKIAS                 HKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 158 VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 217
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 110

Query: 218  277
           
Sbjct: 121  110

Query: 278  337
           
Sbjct: 181  110

Query: 338  397
           
Sbjct: 241  110

Query: 398  428
           
Sbjct: 301  110

[Close]

BLAST of CU103051 vs. NCBI nr
Match: gi|659066313|ref|XP_008438287.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 93/110 (84.55%), Postives = 93/110 (84.55%), Query Frame = 2


Query: 98  MVGLMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEE 157
           MVGLMDQERLRKIAS                 HKTTTTDDKRLQSTLKRIGVNAIPAIEE
Sbjct: 1   MVGLMDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEE 60

Query: 158 VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 217
           VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  VNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 110

Query: 218  277
           
Sbjct: 121  110

Query: 278  337
           
Sbjct: 181  110

Query: 338  397
           
Sbjct: 241  110

Query: 398  428
           
Sbjct: 301  110

[Close]

BLAST of CU103051 vs. NCBI nr
Match: gi|449439239|ref|XP_004137394.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 89/106 (83.96%), Postives = 89/106 (83.96%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           MDQERLRKIAS                 HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

[Close]

BLAST of CU103051 vs. NCBI nr
Match: gi|659066315|ref|XP_008438373.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 89/106 (83.96%), Postives = 89/106 (83.96%), Query Frame = 2


Query: 110 MDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 169
           MDQERLRKIAS                 HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDQERLRKIASAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 170 KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 229
           KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP
Sbjct: 61  KDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 106

Query: 230  289
           
Sbjct: 121  106

Query: 290  349
           
Sbjct: 181  106

Query: 350  409
           
Sbjct: 241  106

Query: 410  428
           
Sbjct: 301  106

[Close]

BLAST of CU103051 vs. NCBI nr
Match: gi|695078944|ref|XP_009386875.1| (PREDICTED: transcription factor BTF3 homolog 4-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 160.2 bits (404), Expect = 4.2e-36
Identity = 88/124 (70.97%), Postives = 94/124 (75.81%), Query Frame = 2


Query: 56  FFDSSFLGLFYSFLMVGLMDQERLRKIASXXXXXXXXXXXXXXXXXHKTTTTDDKRLQST 115
           FF SS +G   S L V  M+ E+L K+A                  HKTTTTDDKRLQST
Sbjct: 22  FFSSSGVG---SRLTVAKMNVEKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQST 81

Query: 116 LKRIGVNAIPAIEEVNIFKDDVVIQFNNPKVQASIAANTWVVSGSPQTKKLQDILPGIIN 175
           LKRIGVNAIPAIEEVNIFKDD+VIQF NPKVQASIAANTWVVSGSPQTKKLQD+LPGIIN
Sbjct: 82  LKRIGVNAIPAIEEVNIFKDDLVIQFVNPKVQASIAANTWVVSGSPQTKKLQDLLPGIIN 141

Query: 176 QLGP 235
           QLGP
Sbjct: 142 QLGP 142

Query: 236  295
           
Sbjct: 202  142

Query: 296  355
           
Sbjct: 262  142

Query: 356  415
           
Sbjct: 322  142

Query: 416  428
           
Sbjct: 382  142

The following BLAST results are available for this feature:

BLAST of CU103051 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BTF3L_ARATH	2.7e-35	72.64	Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana GN=A...	[more]
BTF3_ARATH	3.5e-35	73.58	Basic transcription factor 3 OS=Arabidopsis thaliana GN=BTF3 PE=1 SV=1	[more]
BT3L4_DANRE	4.9e-21	49.06	Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1	[more]
BTF3_HUMAN	1.4e-20	47.66	Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1	[more]
BTF3_MOUSE	1.4e-20	47.66	Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=1 SV=3	[more]

BLAST of CU103051 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPY4_CUCSA	1.3e-41	84.55	Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G...	[more]
A0A0A0LPY4_CUCSA	4.0e-09	100.00	Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G...	[more]
M0U8X4_MUSAM	5.7e+00	59.38	Nascent polypeptide-associated complex subunit beta OS=Musa acuminata subsp. mal...	[more]
A0A0B0MWR1_GOSAR	8.3e+01	51.35	Nascent polypeptide-associated complex subunit beta OS=Gossypium arboreum GN=F38...	[more]
A0A0D2R4N2_GOSRA	8.3e+01	51.35	Nascent polypeptide-associated complex subunit beta OS=Gossypium raimondii GN=B4...	[more]

BLAST of CU103051 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439237\|ref\|XP_004137393.1\|	1.5e-41	84.55	PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis sativus]	[more]
gi\|659066313\|ref\|XP_008438287.1\|	1.5e-41	84.55	PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis melo]	[more]
gi\|449439239\|ref\|XP_004137394.1\|	2.4e-39	83.96	PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis sativus]	[more]
gi\|659066315\|ref\|XP_008438373.1\|	2.4e-39	83.96	PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis melo]	[more]
gi\|695078944\|ref\|XP_009386875.1\|	4.2e-36	70.97	PREDICTED: transcription factor BTF3 homolog 4-like [Musa acuminata subsp. malac...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002715	Nas_poly-pep-assoc_cplx_dom

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G031860	Csa1G031860	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02KRTNA	FKNP3UI02KRTNA	EST
G0056409	G0056409	EST
G0099036	G0099036	EST
G0192485	G0192485	EST
RG9_D03	RG9_D03	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002715	Nascent polypeptide-associated complex NAC domain	PFAM	PF01849	NAC	coord: 36..91 score: 1.3
IPR002715	Nascent polypeptide-associated complex NAC domain	SMART	SM01407	NAC_2	coord: 36..91 score: 1.3
IPR002715	Nascent polypeptide-associated complex NAC domain	PROFILE	PS51151	NAC_AB	coord: 33..97 score: 16
None	No IPR available	PANTHER	PTHR10351	TRANSCRIPTION FACTOR BTF3	coord: 1..151 score: 3.8