CU102895 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU102895
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 19941540 .. 19941896 (-)
Sequence length252
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAGGGAGAATTGCTGGGCATCTGATGGTAACTATTATGCAAAAGTCTTGGATATGATGAAGATGAGGATGAAAGATTTTCCAATCCAACTGGAAGCCAGAACTCAACTGCAACTGTCTTTGGACAACATTTTGTATGGTTGTAGTTCAATTTCCAACTTTTATGTTTGTTGTGCTAGATAAAATTGGGTAGCCCCCCACAATGAGATTCCCTTACACTTTCTATTAGTATCTGCAGACTAAAA
Library categoryESTs
fruit (8DPP) library10
BLAST of CU102895 vs. TrEMBL
Match: A0A0A0L365_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622220 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-25
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 2

Query: 11  RENCWASDGNYYAKVLDMMKMRMKDFPIQLEARTQLQLSLDNILYGCSSISNFYVCCAR 70
           RENCWASDGNYYAKVLDMMKMRMKDFPIQL AR QLQLSLDNILYGCSSISNFYVCCAR
Sbjct: 28  RENCWASDGNYYAKVLDMMKMRMKDFPIQLAARPQLQLSLDNILYGCSSISNFYVCCAR 86

Query: 71  130
           
Sbjct: 88  86

Query: 131 188
           
Sbjct: 148 86

BLAST of CU102895 vs. NCBI nr
Match: gi|700199854|gb|KGN55012.1| (hypothetical protein Csa_4G622220 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-25
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 2

Query: 11  RENCWASDGNYYAKVLDMMKMRMKDFPIQLEARTQLQLSLDNILYGCSSISNFYVCCAR 70
           RENCWASDGNYYAKVLDMMKMRMKDFPIQL AR QLQLSLDNILYGCSSISNFYVCCAR
Sbjct: 28  RENCWASDGNYYAKVLDMMKMRMKDFPIQLAARPQLQLSLDNILYGCSSISNFYVCCAR 86

Query: 71  130
           
Sbjct: 88  86

Query: 131 188
           
Sbjct: 148 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L365_CUCSA1.9e-2596.61Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622220 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700199854|gb|KGN55012.1|1.2e-2596.61hypothetical protein Csa_4G622220 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G622220Csa4G622220gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KJ527FKNP3UI02KJ527EST
FKNP3UI02LCFXQFKNP3UI02LCFXQEST
FKNP3UI02LLOM7FKNP3UI02LLOM7EST
FKNP3UI02LMTS1FKNP3UI02LMTS1EST
FKNP3UI02LUFJZFKNP3UI02LUFJZEST
FKNP3UI02LV959FKNP3UI02LV959EST
FKNP3UI02M6Q9WFKNP3UI02M6Q9WEST
FKNP3UI02MM0X3FKNP3UI02MM0X3EST
FKNP3UI02NUUZ7FKNP3UI02NUUZ7EST
FKNP3UI02NWEP3FKNP3UI02NWEP3EST