CU102653 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU102653
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 6207960 .. 6208185 (-)
Sequence length228
The following sequences are available for this feature:

transcribed_cluster sequence

TACTTCCATTTTCCTATAATGGCCATGGGTGGGGTTGAGGCTAGCTCTCCGGGAGGGATGTCCTTCAATCATGTTCTATATATGTTGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACGATCCACTTGGTGGTGTTTTTACAAGCTATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACGAGTAATCATTGCTGGAATATTTCCTACT
BLAST of CU102653 vs. TrEMBL
Match: A0A0A0KF83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091890 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-22
Identity = 56/69 (81.16%), Postives = 56/69 (81.16%), Query Frame = 1

Query: 19  MAMGGVEASSPGGMSFNHVXXXXXXXXXXXXXSPNIYDPLGGVFTSYHRNITQLTHTIDS 78
           MAMGGVEASSPGGMSFNHV             SPNIYDPLGGVFTSYHRNITQLTHTIDS
Sbjct: 1   MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60

Query: 79  RVIIAGIFP 138
           RVIIAGIFP
Sbjct: 61  RVIIAGIFP 69

Query: 139 198
           
Sbjct: 121 69

Query: 199 226
           
Sbjct: 181 69

BLAST of CU102653 vs. NCBI nr
Match: gi|700191212|gb|KGN46416.1| (hypothetical protein Csa_6G091890 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 8.8e-23
Identity = 56/69 (81.16%), Postives = 56/69 (81.16%), Query Frame = 1

Query: 19  MAMGGVEASSPGGMSFNHVXXXXXXXXXXXXXSPNIYDPLGGVFTSYHRNITQLTHTIDS 78
           MAMGGVEASSPGGMSFNHV             SPNIYDPLGGVFTSYHRNITQLTHTIDS
Sbjct: 1   MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60

Query: 79  RVIIAGIFP 138
           RVIIAGIFP
Sbjct: 61  RVIIAGIFP 69

Query: 139 198
           
Sbjct: 121 69

Query: 199 226
           
Sbjct: 181 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KF83_CUCSA1.4e-2281.16Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191212|gb|KGN46416.1|8.8e-2381.16hypothetical protein Csa_6G091890 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G091890Csa6G091890gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OT0TFFKNP3UI02OT0TFEST
G0013574G0013574EST
G0017447G0017447EST
G0063046G0063046EST
G0104620G0104620EST
G0155481G0155481EST
H0013587H0013587EST
H0030110H0030110EST
H0077442H0077442EST
H0146479H0146479EST