Csa6G091890 (gene) Cucumber (Chinese Long) v2

NameCsa6G091890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 6207933 .. 6208166 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGGTGGGGTTGAGGCTAGCTCTCCGGGAGGGATGTCCTTCAATCATGTTCTATATATGTTGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACGATCCACTTGGTGGTGTTTTTACAAGCTATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACGAGTAATCATTGCTGGAATATTTCCTCCATTTGAAGTGGTAAAATCTGTTTGA

mRNA sequence

ATGGCCATGGGTGGGGTTGAGGCTAGCTCTCCGGGAGGGATGTCCTTCAATCATGTTCTATATATGTTGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACGATCCACTTGGTGGTGTTTTTACAAGCTATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACGAGTAATCATTGCTGGAATATTTCCTCCATTTGAAGTGGTAAAATCTGTTTGA

Coding sequence (CDS)

ATGGCCATGGGTGGGGTTGAGGCTAGCTCTCCGGGAGGGATGTCCTTCAATCATGTTCTATATATGTTGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACGATCCACTTGGTGGTGTTTTTACAAGCTATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACGAGTAATCATTGCTGGAATATTTCCTCCATTTGAAGTGGTAAAATCTGTTTGA

Protein sequence

MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDSRVIIAGIFPPFEVVKSV*
BLAST of Csa6G091890 vs. TrEMBL
Match: A0A0A0KF83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091890 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60
          MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS
Sbjct: 1  MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60

Query: 61 RVIIAGIFPPFEVVKSV 78
          RVIIAGIFPPFEVVKSV
Sbjct: 61 RVIIAGIFPPFEVVKSV 77

BLAST of Csa6G091890 vs. NCBI nr
Match: gi|700191212|gb|KGN46416.1| (hypothetical protein Csa_6G091890 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 7.1e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60
          MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS
Sbjct: 1  MAMGGVEASSPGGMSFNHVLYMLILYMLMYLLSPNIYDPLGGVFTSYHRNITQLTHTIDS 60

Query: 61 RVIIAGIFPPFEVVKSV 78
          RVIIAGIFPPFEVVKSV
Sbjct: 61 RVIIAGIFPPFEVVKSV 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KF83_CUCSA5.0e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191212|gb|KGN46416.1|7.1e-36100.00hypothetical protein Csa_6G091890 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102653cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G091890.1Csa6G091890.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU102653CU102653transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None