CU102622 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU102622
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 19901079 .. 19901453 (-)
Sequence length379
The following sequences are available for this feature:

transcribed_cluster sequence

CGTATGCAATAATTAATGGTATTTAATTTCACAAAACCCTAATGTTTAAACAAAAATAGAAGAAAATTGATAATCCTACAATGAACCAAAAACATTAAGAAAAGATAGTGAACTATGAAATGCAAAGATGAATTAATATAAACATAATGAAACAGGGTGGGGTGGGAACTATGGTTATGAATTTGTGTACCAAAAATATCCATTAACAATATCATAGAAAGAGAAGGGAACTAATTATTATTACTAATTAAGAAAGAGCTCAAGTTGAGAAGTGTTTTCCTGATCAAGGACATCAAGGAAGACGGGATCAACGGTGAGATGGCTGTCCACGTGGACCTTGAATTTGTGACTCCACCACAGCACTCTCGCCAAAACCCCC
BLAST of CU102622 vs. TrEMBL
Match: A0A0A0KGW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = -2

Query: 247 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 306
           G  ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 179 GGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 222

Query: 307 366
           
Sbjct: 239 222

Query: 367 379
           
Sbjct: 299 222

BLAST of CU102622 vs. TrEMBL
Match: A0A0D2MRV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G010300 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.7e-12
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = -2

Query: 250 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFL 309
           G  A+VLWW H+FKVHVDSH+TVDPVFLDV+DQEN SQLE+FL
Sbjct: 140 GGKAKVLWWGHRFKVHVDSHITVDPVFLDVIDQENRSQLEIFL 182

Query: 310 369
           
Sbjct: 200 182

Query: 370 379
           
Sbjct: 260 182

BLAST of CU102622 vs. TrEMBL
Match: A0A0S3SBZ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = -2

Query: 253 LARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELF 312
           +ARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+LE+F
Sbjct: 142 IARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVF 181

Query: 313 372
           
Sbjct: 202 181

BLAST of CU102622 vs. TrEMBL
Match: A0A0L9V6C7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = -2

Query: 253 LARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELF 312
           +ARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+LE+F
Sbjct: 142 IARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVF 181

Query: 313 372
           
Sbjct: 202 181

BLAST of CU102622 vs. TrEMBL
Match: A0A061GU68_THECC (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Theobroma cacao GN=TCM_041382 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = -2

Query: 250 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFL 309
           G  A+VLWW HKF VHVDSH+TVDPVFLDV+DQEN SQLELF+
Sbjct: 140 GGKAKVLWWDHKFNVHVDSHVTVDPVFLDVIDQENKSQLELFV 182

Query: 310 369
           
Sbjct: 200 182

Query: 370 379
           
Sbjct: 260 182

BLAST of CU102622 vs. NCBI nr
Match: gi|449444795|ref|XP_004140159.1| (PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = -2

Query: 247 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 306
           G  ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 140 GGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 183

Query: 307 366
           
Sbjct: 200 183

Query: 367 379
           
Sbjct: 260 183

BLAST of CU102622 vs. NCBI nr
Match: gi|700192825|gb|KGN48029.1| (hypothetical protein Csa_6G425170 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = -2

Query: 247 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 306
           G  ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 179 GGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 222

Query: 307 366
           
Sbjct: 239 222

Query: 367 379
           
Sbjct: 299 222

BLAST of CU102622 vs. NCBI nr
Match: gi|659097347|ref|XP_008449575.1| (PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-16
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = -2

Query: 247 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 306
           G  A+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 239 GGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282

Query: 307 366
           
Sbjct: 299 282

Query: 367 379
           
Sbjct: 359 282

BLAST of CU102622 vs. NCBI nr
Match: gi|1012030096|ref|XP_015951817.1| (PREDICTED: uncharacterized protein LOC107476511 [Arachis duranensis])

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = -2

Query: 253 ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELF 312
           ARVLWW H FKVHVDSH+TVDPVFLDV+DQENTS+LELF
Sbjct: 144 ARVLWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELELF 182

Query: 313 370
           
Sbjct: 204 182

BLAST of CU102622 vs. NCBI nr
Match: gi|823145952|ref|XP_012472857.1| (PREDICTED: uncharacterized protein LOC105790021 [Gossypium raimondii])

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = -2

Query: 250 GVLARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFL 309
           G  A+VLWW H+FKVHVDSH+TVDPVFLDV+DQEN SQLE+FL
Sbjct: 140 GGKAKVLWWGHRFKVHVDSHITVDPVFLDVIDQENRSQLEIFL 182

Query: 310 369
           
Sbjct: 200 182

Query: 370 379
           
Sbjct: 260 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KGW5_CUCSA1.6e-1595.45Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1[more]
A0A0D2MRV6_GOSRA4.7e-1279.07Uncharacterized protein OS=Gossypium raimondii GN=B456_004G010300 PE=4 SV=1[more]
A0A0S3SBZ9_PHAAN1.1e-1180.00Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=... [more]
A0A0L9V6C7_PHAAN1.1e-1180.00Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1[more]
A0A061GU68_THECC1.4e-1179.07Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=The... [more]
Match NameE-valueIdentityDescription
gi|449444795|ref|XP_004140159.1|2.7e-1695.45PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus][more]
gi|700192825|gb|KGN48029.1|2.7e-1695.45hypothetical protein Csa_6G425170 [Cucumis sativus][more]
gi|659097347|ref|XP_008449575.1|5.9e-1693.18PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo][more]
gi|1012030096|ref|XP_015951817.1|1.0e-1287.18PREDICTED: uncharacterized protein LOC107476511 [Arachis duranensis][more]
gi|823145952|ref|XP_012472857.1|1.0e-1279.07PREDICTED: uncharacterized protein LOC105790021 [Gossypium raimondii][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G425170Csa6G425170gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0031219G0031219EST
G0096845G0096845EST
G0160968G0160968EST
H0071456H0071456EST
H0149378H0149378EST