CU102416 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU102416
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 2931850 .. 2932120 (+)
Sequence length272
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ACTAAGAAATATCAGCAGCATGGTTTTCTTTCCTGTACTAGGGTTTTCACGTAAATTTGTGTTTGTTCTACATCTCTACTTTCAATACCAACAAAACATGCATTTGGTTGTGGAAGATTACACATAAACCCTTGAAAACATAATAAGAATCAATGTGAGATAAAGAAGGAATTTAGAAACTCAGAACGGGATAAAGCAAAGAAAAATCAAGTGTTTCAGAAGCATAAAAATGTGAAGATCTGAACATGGAGGACTCACGATGGGCAGGCCAC
Homology
[Close]
BLAST of CU102416 vs. TrEMBL
Match: A0A0A0LPT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025910 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-08
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 184 GLPIVSPPCSDLHIFMLLKHLIFLCFIPF 243
           GLPIVSPPCSDLHIFMLLKHLIFLCFIPF
Sbjct: 44  GLPIVSPPCSDLHIFMLLKHLIFLCFIPF 72

Query: 244  271
           
Sbjct: 104  72

[Close]
BLAST of CU102416 vs. NCBI nr
Match: gi|700208814|gb|KGN63910.1| (hypothetical protein Csa_1G025910 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 184 GLPIVSPPCSDLHIFMLLKHLIFLCFIPF 243
           GLPIVSPPCSDLHIFMLLKHLIFLCFIPF
Sbjct: 44  GLPIVSPPCSDLHIFMLLKHLIFLCFIPF 72

Query: 244  271
           
Sbjct: 104  72

The following BLAST results are available for this feature:
BLAST of CU102416 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPT3_CUCSA2.3e-08100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025910 PE=4 SV=1[more]
BLAST of CU102416 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208814|gb|KGN63910.1|2.8e-07100.00hypothetical protein Csa_1G025910 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025910Csa1G025910gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OV3KRFKNP3UI02OV3KREST
G0027237G0027237EST
G0038667G0038667EST
G0174546G0174546EST
H0130026H0130026EST