CU097058 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU097058
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Adenylate cyclase
Location	Chr2 : 1463635 .. 1464335 (+)
Sequence length	710

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAATTTGAAGTATGAAAGAGCATCTTCTTCCCTAATTTTCCTTGGAATCACTTTTGTGTTCCTCTGCTCAGAACAGAGTGAGCAACCAGCCTTAGCGAAATGCTGAGAAGACAACCCAGCAAGATCGAGGTAAAAATCGAAGACAAGGAAGAACTCGAACAAGCTCGCAAACGCGCCGCCGCCGCCGCCTCAACCACCACCACTACCACCACCGACGCTACCTCTGCCGCTGGCTCCCTCCTTCATAACATCAACCGCAACAAAGATCAAGCCTCCAAAGCCCAGCGGCTTGGTATCTCCTCTTGAAACAATCGAAATGGAGGTGGAGGTGAAGCTTCGCCTTCCGGATGCTGTTTCTCATGGTCAGGTATCAACTCTTCTTTCGTCATTTCATATTAAAACCCACCGTCAAGAGAATTTCTTCTTTGATGGCTTGTCCGGTGAGCTTTCGTCTCGGTTAGCGGTTCTCCGTATCCGATTTTACGACGGGGATGCTCGTTGTGTGATTTGTCTGAAAGCAAGAGCGGTTCTGGTTGACGGTGTTAGTCGAGTTGAGGAAGATGAAGAGGAATTGGAGCCATCTGTTGGCCGGGCCTGCGTGGAGGATCCGCAGAAGTTGAAAGAAGTGGAGTCTAGGATTAGTGGGGGGGGTTAAAATGAATATGGGGAATATGGATTTGTGGGTTTAGGAGGGTTTAGGA

Library


Library category	ESTs
fruit (8DPP) library	8
gynoecious flower library	5
hermaphrodite flower library	6

Homology

[Close]

BLAST of CU097058 vs. Swiss-Prot
Match: TTM3_ARATH (Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.8e-19
Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRL  A +H +++TLL+ +H+KT  Q N FFD    +LS R AVLR+RF    A
Sbjct: 1   MEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAA 60

Query: 386 ---------RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXX 445
                    RC++ LKA+  L +G+SRV          +G+ CVE P KL ++ SR+   
Sbjct: 61  VSAASPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDIGSRVLKR 120

Query: 446 XXXXXXXXXFVG---LGGF 505
                    F+G   LGGF
Sbjct: 121 VKEEYGFNDFLGFVCLGGF 139

Query: 506  565
           
Sbjct: 181  139

Query: 566  625
           
Sbjct: 241  139

Query: 626  685
           
Sbjct: 301  139

Query: 686  707
           
Sbjct: 361  139

[Close]

BLAST of CU097058 vs. TrEMBL
Match: A0A0A0LL39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008660 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 108/128 (84.38%), Postives = 108/128 (84.38%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA
Sbjct: 1   MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXXXXXXXXXXX 445
           RCVICLKARAVLVDGVSRV        PSVGRACVEDPQKLKEVESRI            
Sbjct: 61  RCVICLKARAVLVDGVSRVEEDEEELEPSVGRACVEDPQKLKEVESRIMGRVKDEYGEYG 120

Query: 446 FVGLGGFR 505
           FVGLGGFR
Sbjct: 121 FVGLGGFR 128

Query: 506  565
           
Sbjct: 181  128

Query: 566  625
           
Sbjct: 241  128

Query: 626  685
           
Sbjct: 301  128

Query: 686  710
           
Sbjct: 361  128

[Close]

BLAST of CU097058 vs. TrEMBL
Match: F6HCH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00440 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31
Identity = 77/130 (59.23%), Postives = 91/130 (70.00%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVK+RLPD+ +H  VS LLSSFH +T RQ+N FFDG +GELSSR AVLR+RFY  DA
Sbjct: 1   MEVEVKIRLPDSSTHRAVSALLSSFHRETQRQQNLFFDGAAGELSSRRAVLRLRFYGDDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRI--SXXXXXXXXX 445
           RCV+ LKA+A+LV+GVSRV        PS+GR CV DP KL EV+SRI            
Sbjct: 61  RCVVSLKAKAILVNGVSRVEEDEEEMEPSIGRDCVADPSKLSEVDSRILRRVRDEFGVGT 120

Query: 446 XXFVGLGGFR 505
             FV LGGF+
Sbjct: 121 GGFVCLGGFK 130

Query: 506  565
           
Sbjct: 181  130

Query: 566  625
           
Sbjct: 241  130

Query: 626  685
           
Sbjct: 301  130

Query: 686  710
           
Sbjct: 361  130

[Close]

BLAST of CU097058 vs. TrEMBL
Match: I3T9A3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.5e-31
Identity = 77/131 (58.78%), Postives = 89/131 (67.94%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLP+A S+ +V+TLLS FH+ THRQ N FFDG   ELSSR A+LR+RFY  D 
Sbjct: 1   MEVEVKLRLPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELSSRRAILRLRFYGDDE 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRIS---XXXXXXXX 445
           RCV+ LKA+AVLVDGVSRV        P +GR CV++P KL  VESRI            
Sbjct: 61  RCVVSLKAKAVLVDGVSRVEEDEEDLDPKIGRDCVDEPGKLGLVESRIMGRVKEEFGVVG 120

Query: 446 XXXFVGLGGFR 505
              FVGLGGFR
Sbjct: 121 ENGFVGLGGFR 131

Query: 506  565
           
Sbjct: 181  131

Query: 566  625
           
Sbjct: 241  131

Query: 626  685
           
Sbjct: 301  131

Query: 686  710
           
Sbjct: 361  131

[Close]

BLAST of CU097058 vs. TrEMBL
Match: A0A059CLM2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00486 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30
Identity = 75/127 (59.06%), Postives = 88/127 (69.29%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLP A +H +V++LLS   ++T RQEN FFDG +GELSSR AVLR+RFY+GDA
Sbjct: 1   MEVEVKLRLPGADAHRRVASLLSPHRLRTDRQENLFFDGAAGELSSRRAVLRLRFYNGDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXXXXXXXXXXX 445
           RCV  LKARAVLVDGVSRV        P+ GR CV DP K+  + SR+            
Sbjct: 61  RCVASLKARAVLVDGVSRVEEDEEELDPARGRECVADPGKMGSMGSRVLRRCREEFGVGE 120

Query: 446 FVGLGGF 505
           FVGLGGF
Sbjct: 121 FVGLGGF 127

Query: 506  565
           
Sbjct: 181  127

Query: 566  625
           
Sbjct: 241  127

Query: 626  685
           
Sbjct: 301  127

Query: 686  707
           
Sbjct: 361  127

[Close]

BLAST of CU097058 vs. TrEMBL
Match: G7JGL5_MEDTR (Adenylate cyclase OS=Medicago truncatula GN=MTR_4g116130 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 76/131 (58.02%), Postives = 89/131 (67.94%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLP+A S+ +V+TLLS FH+ THRQ N FFDG   ELSSR A+LR+RFY  D 
Sbjct: 1   MEVEVKLRLPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELSSRRAILRLRFYGDDE 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRIS---XXXXXXXX 445
           RCV+ LKA+AVLVDGVSRV        P +GR CV++P KL  VESRI            
Sbjct: 61  RCVVSLKAKAVLVDGVSRVEEDEEDLDPKIGRDCVDEPGKLGLVESRIMGRVKEEFGVVG 120

Query: 446 XXXFVGLGGFR 505
              FVGLGGF+
Sbjct: 121 ENGFVGLGGFK 131

Query: 506  565
           
Sbjct: 181  131

Query: 566  625
           
Sbjct: 241  131

Query: 626  685
           
Sbjct: 301  131

Query: 686  710
           
Sbjct: 361  131

[Close]

BLAST of CU097058 vs. NCBI nr
Match: gi|449443035|ref|XP_004139286.1| (PREDICTED: triphosphate tunel metalloenzyme 3 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-50
Identity = 108/128 (84.38%), Postives = 108/128 (84.38%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA
Sbjct: 1   MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXXXXXXXXXXX 445
           RCVICLKARAVLVDGVSRV        PSVGRACVEDPQKLKEVESRI            
Sbjct: 61  RCVICLKARAVLVDGVSRVEEDEEELEPSVGRACVEDPQKLKEVESRIMGRVKDEYGEYG 120

Query: 446 FVGLGGFR 505
           FVGLGGFR
Sbjct: 121 FVGLGGFR 128

Query: 506  565
           
Sbjct: 181  128

Query: 566  625
           
Sbjct: 241  128

Query: 626  685
           
Sbjct: 301  128

Query: 686  710
           
Sbjct: 361  128

[Close]

BLAST of CU097058 vs. NCBI nr
Match: gi|659070925|ref|XP_008457274.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 3.4e-49
Identity = 105/128 (82.03%), Postives = 107/128 (83.59%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLPDAVSHGQVSTLLS FHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA
Sbjct: 1   MEVEVKLRLPDAVSHGQVSTLLSPFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXXXXXXXXXXX 445
           RCVICLKARAVLVDGVSRV        PSVGRACVEDPQ+LKEVESRI            
Sbjct: 61  RCVICLKARAVLVDGVSRVEEDEEELEPSVGRACVEDPQRLKEVESRIMGRVKDEFGGYG 120

Query: 446 FVGLGGFR 505
           FVGLGGF+
Sbjct: 121 FVGLGGFK 128

Query: 506  565
           
Sbjct: 181  128

Query: 566  625
           
Sbjct: 241  128

Query: 626  685
           
Sbjct: 301  128

Query: 686  710
           
Sbjct: 361  128

[Close]

BLAST of CU097058 vs. NCBI nr
Match: gi|1009125249|ref|XP_015879511.1| (PREDICTED: triphosphate tunel metalloenzyme 3 [Ziziphus jujuba])

HSP 1 Score: 149.1 bits (375), Expect = 1.0e-32
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVKLRLPDA +H +V+ LLS F + T RQEN FFDG + ELSSR AVLR+RFYD D 
Sbjct: 1   MEVEVKLRLPDAAAHRRVNDLLSPFRVATFRQENLFFDGAAAELSSRRAVLRLRFYDDDT 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRISXXXXXXXXXXX 445
           RCV+ LKARAVLVDG+SRV        P+VGRACV +P+KL   E RI            
Sbjct: 61  RCVVSLKARAVLVDGISRVEEDEEELEPAVGRACVAEPEKLLAAECRILKRVKDEFGVSG 120

Query: 446 FVGLGGF 505
           FVGLGGF
Sbjct: 121 FVGLGGF 127

Query: 506  565
           
Sbjct: 181  127

Query: 566  625
           
Sbjct: 241  127

Query: 626  685
           
Sbjct: 301  127

Query: 686  707
           
Sbjct: 361  127

[Close]

BLAST of CU097058 vs. NCBI nr
Match: gi|225446199|ref|XP_002263004.1| (PREDICTED: triphosphate tunel metalloenzyme 3 isoform X3 [Vitis vinifera])

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31
Identity = 77/130 (59.23%), Postives = 91/130 (70.00%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVK+RLPD+ +H  VS LLSSFH +T RQ+N FFDG +GELSSR AVLR+RFY  DA
Sbjct: 1   MEVEVKIRLPDSSTHRAVSALLSSFHRETQRQQNLFFDGAAGELSSRRAVLRLRFYGDDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRI--SXXXXXXXXX 445
           RCV+ LKA+A+LV+GVSRV        PS+GR CV DP KL EV+SRI            
Sbjct: 61  RCVVSLKAKAILVNGVSRVEEDEEEMEPSIGRDCVADPSKLSEVDSRILRRVRDEFGVGT 120

Query: 446 XXFVGLGGFR 505
             FV LGGF+
Sbjct: 121 GGFVCLGGFK 130

Query: 506  565
           
Sbjct: 181  130

Query: 566  625
           
Sbjct: 241  130

Query: 626  685
           
Sbjct: 301  130

Query: 686  710
           
Sbjct: 361  130

[Close]

BLAST of CU097058 vs. NCBI nr
Match: gi|731407510|ref|XP_010656522.1| (PREDICTED: triphosphate tunel metalloenzyme 3 isoform X1 [Vitis vinifera])

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31
Identity = 77/130 (59.23%), Postives = 91/130 (70.00%), Query Frame = 2


Query: 326 MEVEVKLRLPDAVSHGQVSTLLSSFHIKTHRQENFFFDGLSGELSSRLAVLRIRFYDGDA 385
           MEVEVK+RLPD+ +H  VS LLSSFH +T RQ+N FFDG +GELSSR AVLR+RFY  DA
Sbjct: 1   MEVEVKIRLPDSSTHRAVSALLSSFHRETQRQQNLFFDGAAGELSSRRAVLRLRFYGDDA 60

Query: 386 RCVICLKARAVLVDGVSRVXXXXXXXXPSVGRACVEDPQKLKEVESRI--SXXXXXXXXX 445
           RCV+ LKA+A+LV+GVSRV        PS+GR CV DP KL EV+SRI            
Sbjct: 61  RCVVSLKAKAILVNGVSRVEEDEEEMEPSIGRDCVADPSKLSEVDSRILRRVRDEFGVGT 120

Query: 446 XXFVGLGGFR 505
             FV LGGF+
Sbjct: 121 GGFVCLGGFK 130

Query: 506  565
           
Sbjct: 181  130

Query: 566  625
           
Sbjct: 241  130

Query: 626  685
           
Sbjct: 301  130

Query: 686  710
           
Sbjct: 361  130

The following BLAST results are available for this feature:

BLAST of CU097058 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTM3_ARATH	4.8e-19	41.01	Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1	[more]

BLAST of CU097058 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL39_CUCSA	2.2e-50	84.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008660 PE=4 SV=1	[more]
F6HCH5_VITVI	1.3e-31	59.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00440 PE=4 SV=...	[more]
I3T9A3_MEDTR	8.5e-31	58.78	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A059CLM2_EUCGR	1.5e-30	59.06	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00486 PE=4 SV=1	[more]
G7JGL5_MEDTR	1.9e-30	58.02	Adenylate cyclase OS=Medicago truncatula GN=MTR_4g116130 PE=4 SV=1	[more]

BLAST of CU097058 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443035\|ref\|XP_004139286.1\|	1.8e-50	84.38	PREDICTED: triphosphate tunel metalloenzyme 3 [Cucumis sativus]	[more]
gi\|659070925\|ref\|XP_008457274.1\|	3.4e-49	82.03	PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo]	[more]
gi\|1009125249\|ref\|XP_015879511.1\|	1.0e-32	60.63	PREDICTED: triphosphate tunel metalloenzyme 3 [Ziziphus jujuba]	[more]
gi\|225446199\|ref\|XP_002263004.1\|	1.1e-31	59.23	PREDICTED: triphosphate tunel metalloenzyme 3 isoform X3 [Vitis vinifera]	[more]
gi\|731407510\|ref\|XP_010656522.1\|	1.1e-31	59.23	PREDICTED: triphosphate tunel metalloenzyme 3 isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR023577	CYTH_domain

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa2G008660	Csa2G008660	gene
Csa2G008650	Csa2G008650	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02K6TV3	FKNP3UI02K6TV3	EST
FKNP3UI02KG5D7	FKNP3UI02KG5D7	EST
FKNP3UI02LEPFS	FKNP3UI02LEPFS	EST
FKNP3UI02LHAFX	FKNP3UI02LHAFX	EST
FKNP3UI02LRLI5	FKNP3UI02LRLI5	EST
FKNP3UI02MCL9T	FKNP3UI02MCL9T	EST
FKNP3UI02MUNQW	FKNP3UI02MUNQW	EST
FKNP3UI02NQJH2	FKNP3UI02NQJH2	EST
G0044178	G0044178	EST
G0063077	G0063077	EST
G0080861	G0080861	EST
G0150990	G0150990	EST
G0191921	G0191921	EST
H0017841	H0017841	EST
H0024994	H0024994	EST
H0063627	H0063627	EST
H0085127	H0085127	EST
H0112484	H0112484	EST
H0155973	H0155973	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023577	CYTH domain	PFAM	PF01928	CYTH	coord: 73..146 score: 6.
IPR023577	CYTH domain	PROFILE	PS51707	CYTH	coord: 72..184 score: 9
None	No IPR available	unknown	Coil	Coil	coord: 9..29 scor
None	No IPR available	PANTHER	PTHR34948	FAMILY NOT NAMED	coord: 73..180 score: 2.5
None	No IPR available	PANTHER	PTHR34948:SF1	SUBFAMILY NOT NAMED	coord: 73..180 score: 2.5