CU095248 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU095248
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTryptophan aminotransferase related 2, putative
LocationChr1 : 5439801 .. 5440579 (+)
Sequence length581
The following sequences are available for this feature:

transcribed_cluster sequence

GGCCGGAAAATGATTTGTGGGATTATTATGTCCTTAATTAAACACAATTAGGCCATAATTATATCCCCGGTCAGGCCATTGGGTGGATTCTTCCATTCTCTCCTAAACCCCGCCCTTTGTCTGAGTTCTCTCTATTTAATCTCTCTCTCTTGACTCTTAATTTATCTACTCTATTGTAGACAAATTTTTTATTTTCTTTTTGAAACGTTCGATACAATGTTTAATTTTTGTACTTGTATGAATTTCAAGCAAGAGCCCTGCAGCGATGAAGAACGACAGAAGAATTCGCCTGGGAGGAAAAGAGATATGAAGAAGGGGTATACATGAGATCATGTGTAATAATGCTCCTTTGAGGGTTTCGACATCTGAACATCGAGACTACGGGGATGATCGAGTCATCAATCTTGACGCTGGAGACCCAACAATGTACGAAACGTATTAGGAAAAAAATGGGGAAGAAAGCGACGGTGGTGATCCCGAGGTTGGCGATCCATGAGTTTACTTTTCCAACGGCCGGAGTCTTTGCTGGTTTCTCGAGCCGGATTTGTGCCAACAAATTCTCCGTTTACACCGTGTCGTTG
BLAST of CU095248 vs. Swiss-Prot
Match: TAR2_ARATH (Tryptophan aminotransferase-related protein 2 OS=Arabidopsis thaliana GN=TAR2 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 2

Query: 386 DDRVINLDAGDPTMYETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFLEPDLCQQILR 445
           DDR+INL  GDPT+YE Y ++NGE +    P       YFS+  +LCWFLEP+L ++I+R
Sbjct: 75  DDRIINLKFGDPTVYERYWQENGEVTTMVIPG-WQSLSYFSDENNLCWFLEPELAKEIVR 134

Query: 446 LHRVV 505
           +H+VV
Sbjct: 135 VHKVV 138

Query: 506 565
           
Sbjct: 195 138

Query: 566 581
           
Sbjct: 255 138

BLAST of CU095248 vs. TrEMBL
Match: A0A0A0LU54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046290 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2

Query: 251 KSPAAMKNDRRIRLGGKEI*RRGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA 310
           + P + +  ++   G K   ++GIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA
Sbjct: 5   QEPCSDEERQKNSPGRKRDMKKGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA 58

Query: 311 370
           
Sbjct: 65  58

Query: 371 413
           
Sbjct: 125 58

BLAST of CU095248 vs. TrEMBL
Match: A0A0A0LU54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046290 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 1

Query: 238 MNFKQEPCSDEERQKNSPGRKRDMKKG 297
           MNFKQEPCSDEERQKNSPGRKRDMKKG
Sbjct: 1   MNFKQEPCSDEERQKNSPGRKRDMKKG 27

Query: 298 319
           
Sbjct: 61  27


HSP 2 Score: 70.9 bits (172), Expect = 2.0e-09
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 2

Query: 389 DRVINLDAGDPTMYETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFLEPDLCQQILRL 448
           DRVINLD GDPTMYE Y +K G+E+    P       YFS+  SLCWFLEP+  +Q++RL
Sbjct: 90  DRVINLDHGDPTMYENYWQKKGDETTIVIPGWQFM-SYFSDPTSLCWFLEPEFAKQVVRL 149

Query: 449 HRVV 508
           H+VV
Sbjct: 150 HKVV 152

Query: 509 568
           
Sbjct: 210 152

Query: 569 581
           
Sbjct: 270 152

BLAST of CU095248 vs. TrEMBL
Match: A0A0A0R383_MORAL (Tryptophan aminotransferas (Fragment) OS=Morus alba var. multicaulis PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.8e-09
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2

Query: 356 VSTSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFL 415
           V T    + G +++INLD GDPTMYE+Y +K GE++    P       YFS+ + +CWFL
Sbjct: 82  VGTLSEVEDGGEKIINLDHGDPTMYESYWQKMGEKTTIVIPGWQSM-SYFSDIKCVCWFL 141

Query: 416 EPDLCQQILRLHRVV 475
           EP+  +Q++RLH+VV
Sbjct: 142 EPEFAKQVVRLHKVV 155

Query: 476 535
           
Sbjct: 202 155

Query: 536 581
           
Sbjct: 262 155

BLAST of CU095248 vs. TrEMBL
Match: W9S7I7_9ROSA (Tryptophan aminotransferase-related protein 2 OS=Morus notabilis GN=L484_014557 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.8e-09
Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 2

Query: 359 STSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFLE 418
           S SE  D G +++INLD GDPTMYE+Y +K GE++    P       YFS+ + +CWFLE
Sbjct: 84  SLSEVED-GGEKIINLDHGDPTMYESYWQKMGEKTTIVIPGWQSM-SYFSDIKCVCWFLE 143

Query: 419 PDLCQQILRLHRVV 478
           P+  +Q++RLH+VV
Sbjct: 144 PEFAKQVVRLHKVV 155

Query: 479 538
           
Sbjct: 204 155

Query: 539 581
           
Sbjct: 264 155

BLAST of CU095248 vs. TrEMBL
Match: M1ACP8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400007681 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 2

Query: 329 IMCNNAPLRVSTSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESD---GGDPEVGDP*V 388
           + C++ P     ++ +D      INLD GDPTMYE+Y  K   + D    GD  +     
Sbjct: 9   VECSSVPCATPENDTKD--TSTTINLDHGDPTMYESYWRKMENKCDITFNGDDSLS---- 68

Query: 389 YFSNGRSLCWFLEPDLCQQILRLHRVV 448
           YF+NG+SLCWFLE  L +QI RLH VV
Sbjct: 69  YFANGKSLCWFLESKLEEQIKRLHNVV 89

Query: 449 508
           
Sbjct: 129 89

Query: 509 568
           
Sbjct: 189 89

Query: 569 581
           
Sbjct: 249 89

BLAST of CU095248 vs. NCBI nr
Match: gi|778657870|ref|XP_011651709.1| (PREDICTED: tryptophan aminotransferase-related protein 2-like [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-33
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 2

Query: 251 KSPAAMKNDRRIRLGGKEI*RRGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDAGDPTMY 310
           + P + +  ++   G K   ++GIHEIMCNNAPLRVSTSEHRDYGDDRVINLDAGDPTMY
Sbjct: 12  QEPCSDEERQKNSPGRKRDMKKGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDAGDPTMY 71

Query: 311 ETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFLEPDLCQQILRLHRVV 370
           ETY +K G+++    P       YFSNGRSLCWFLEPDLCQQILRLHRVV
Sbjct: 72  ETYWKKMGKKATVVIPGWRSM-SYFSNGRSLCWFLEPDLCQQILRLHRVV 120

Query: 371 430
           
Sbjct: 132 120

Query: 431 490
           
Sbjct: 192 120

Query: 491 550
           
Sbjct: 252 120

Query: 551 581
           
Sbjct: 312 120

BLAST of CU095248 vs. NCBI nr
Match: gi|659067302|ref|XP_008438732.1| (PREDICTED: tryptophan aminotransferase-related protein 2 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = 2

Query: 311 RRGIHEIMC-NNAPLRVSTSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESDGGDPEVG 370
           ++GIHEIMC NN PLRVSTSE  DYGDDRVINLDAGDPTMYETY +K G+++    P   
Sbjct: 32  KKGIHEIMCINNPPLRVSTSERGDYGDDRVINLDAGDPTMYETYWKKMGKKATMVIPGWR 91

Query: 371 DP*VYFSNGRSLCWFLEPDLCQQILRLHRVV 430
               Y+SNGRSLCWFLEPDLCQQILRLHRVV
Sbjct: 92  SM-SYYSNGRSLCWFLEPDLCQQILRLHRVV 121

Query: 431 490
           
Sbjct: 152 121

Query: 491 550
           
Sbjct: 212 121

Query: 551 581
           
Sbjct: 272 121

BLAST of CU095248 vs. NCBI nr
Match: gi|700209236|gb|KGN64332.1| (hypothetical protein Csa_1G046290 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 4.0e-11
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 2

Query: 251 KSPAAMKNDRRIRLGGKEI*RRGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA 310
           + P + +  ++   G K   ++GIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA
Sbjct: 5   QEPCSDEERQKNSPGRKRDMKKGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDA 58

Query: 311 370
           
Sbjct: 65  58

Query: 371 413
           
Sbjct: 125 58

BLAST of CU095248 vs. NCBI nr
Match: gi|1009131033|ref|XP_015882621.1| (PREDICTED: LOW QUALITY PROTEIN: tryptophan aminotransferase-related protein 2-like [Ziziphus jujuba])

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-11
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2

Query: 302 EI*RRGIHEIMCNNAPLRVSTSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESDGGDPE 361
           ++ ++ I  +  +++   +S SE  D G +R+INLD GDPTMYE Y ++ GE +    P 
Sbjct: 60  DVNQKTIQSLSTSSSSATISLSEIED-GGERIINLDHGDPTMYEKYWKQMGERTTIVIPG 119

Query: 362 VGDP*VYFSNGRSLCWFLEPDLCQQILRLHRVV 421
                 YFS+ ++LCWFLEPD  +Q++RLH+VV
Sbjct: 120 WQSM-SYFSDVKNLCWFLEPDXKKQVVRLHKVV 150

Query: 422 481
           
Sbjct: 180 150

Query: 482 541
           
Sbjct: 240 150

Query: 542 581
           
Sbjct: 300 150

BLAST of CU095248 vs. NCBI nr
Match: gi|743905599|ref|XP_011046207.1| (PREDICTED: tryptophan aminotransferase-related protein 2-like [Populus euphratica])

HSP 1 Score: 73.9 bits (180), Expect = 3.3e-10
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 2

Query: 359 STSEHRDYGDDRVINLDAGDPTMYETY*EKNGEESDGGDPEVGDP*VYFSNGRSLCWFLE 418
           S+S     G DRVINLD GDPTMYE Y ++ G++S    P       YFS+  SLCWFLE
Sbjct: 74  SSSSVDSNGRDRVINLDHGDPTMYERYWQQTGDKSTILIPGWQSM-SYFSDAGSLCWFLE 133

Query: 419 PDLCQQILRLHRVV 478
           P+  ++I+RLH++V
Sbjct: 134 PEFAKEIIRLHKIV 146

Query: 479 538
           
Sbjct: 194 146

Query: 539 581
           
Sbjct: 254 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TAR2_ARATH1.5e-1050.77Tryptophan aminotransferase-related protein 2 OS=Arabidopsis thaliana GN=TAR2 PE... [more]
Match NameE-valueIdentityDescription
A0A0A0LU54_CUCSA3.0e-1064.81Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046290 PE=4 SV=1[more]
A0A0A0LU54_CUCSA1.2e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046290 PE=4 SV=1[more]
A0A0A0R383_MORAL9.8e-0945.33Tryptophan aminotransferas (Fragment) OS=Morus alba var. multicaulis PE=2 SV=1[more]
W9S7I7_9ROSA9.8e-0948.65Tryptophan aminotransferase-related protein 2 OS=Morus notabilis GN=L484_014557 ... [more]
M1ACP8_SOLTU1.3e-0843.68Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400007681 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778657870|ref|XP_011651709.1|2.2e-3367.27PREDICTED: tryptophan aminotransferase-related protein 2-like [Cucumis sativus][more]
gi|659067302|ref|XP_008438732.1|2.1e-2873.63PREDICTED: tryptophan aminotransferase-related protein 2 [Cucumis melo][more]
gi|700209236|gb|KGN64332.1|4.0e-1164.81hypothetical protein Csa_1G046290 [Cucumis sativus][more]
gi|1009131033|ref|XP_015882621.1|6.7e-1141.94PREDICTED: LOW QUALITY PROTEIN: tryptophan aminotransferase-related protein 2-li... [more]
gi|743905599|ref|XP_011046207.1|3.3e-1050.00PREDICTED: tryptophan aminotransferase-related protein 2-like [Populus euphratic... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G046290Csa1G046290gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0072395G0072395EST
H0082962H0082962EST
H0097030H0097030EST
H0147253H0147253EST
H0188970H0188970EST