CU093432 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU093432
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9898998 .. 9900640 (+)
Sequence length304
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CAGTTGTATTGTAGCTTCAGACGAGAGTCTAGAGTTCTCCACACAAGTTTTAATATAGAAGGACCCCGACACATTCTAGCCTGGATCGGCTTTGCTCTACTTCTTTCTACGAGCGATTGTAATGTGGCTTCGGCCAAGAGCCCAGAGCTCCACACGCATTTTCTTATACCGAAAGAACCCGATGCATTCTTGCCCGAAGCAGCATGTCTCTCCTTTCTACGGACGATTATGGCTTCGATTGCGAGTCGAGAGTTTCCTATATAGGTTTTGATACCGAAGGAAACCCGACGCATTATGGCCTAAA
Homology
[Close]
BLAST of CU093432 vs. TrEMBL
Match: A0A0A0K9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279830 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.9e-38
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           QLYCSFRRESRVLHTSFNIEG RHILAWIGFALLLSTSD  VASAKSPELHTHFLIPKEP
Sbjct: 146 QLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDFYVASAKSPELHTHFLIPKEP 205

Query: 61  DAFLPEAACLSFLRTIMASIASREFPI 120
           DAFLPEAACLSF++TIMASI SREFPI
Sbjct: 206 DAFLPEAACLSFIQTIMASIESREFPI 232

Query: 121  180
           
Sbjct: 266  232

Query: 181  240
           
Sbjct: 326  232

Query: 241  262
           
Sbjct: 386  232

[Close]
BLAST of CU093432 vs. TrEMBL
Match: A0A0A0K9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279830 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-12
Identity = 50/84 (59.52%), Postives = 57/84 (67.86%), Query Frame = 1 

Query: 10  CSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEPDAF 69
           C F +ESRV H  +NIEG + ILA  G ALLLSTSD  VASAKS E    FLIPK+   F
Sbjct: 54  CGFGQESRVPHAIYNIEGTQSILAQSGLALLLSTSDFYVASAKSREFPMQFLIPKK---F 113

Query: 70  LPEAACLS-FLRTIMASIASREFP 129
            P AA +S FLR IMAS  S++FP
Sbjct: 114 KPVAAWISYFLRAIMASGESQKFP 134

Query: 130  189
           
Sbjct: 174  134

Query: 190  249
           
Sbjct: 234  134

Query: 250  259
           
Sbjct: 294  134


HSP 2 Score: 58.9 bits (141), Expect = 4.0e-06
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 3 

Query: 66  PTHSSLDRLCSTSFYERL*CGFGQEPRAPHAFSYTERTRCILARSSMS-LLSTDDY 125
           P HSS  RL + +FYER  CGFGQE R PHA    E T+ ILA+S ++ LLST D+
Sbjct: 35  PIHSSPKRLGTPTFYERFLCGFGQESRVPHAIYNIEGTQSILAQSGLALLLSTSDF 90

Query: 126  185
           
Sbjct: 95   90

Query: 186  231
           
Sbjct: 155  90


HSP 3 Score: 38.9 bits (89), Expect = 4.3e+00
Identity = 21/34 (61.76%), Postives = 22/34 (64.71%), Query Frame = 3 

Query: 210 LLSTDDYGFDCESRVSYIGFDTEG------NPTH 269
           LL  DD GFD ESR S+IGFDTEG      NP H
Sbjct: 4   LLKMDDDGFDRESRDSHIGFDTEGTRRILANPIH 37

Query: 270  294
           
Sbjct: 64   37


HSP 4 Score: 137.1 bits (344), Expect = 1.2e-29
Identity = 78/109 (71.56%), Postives = 80/109 (73.39%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           QLYCSFRRESRVLHTSFNIEG RHILAWIGFALLLSTSDCNVAS KS E  T  LIPKEP
Sbjct: 424 QLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDCNVASTKSREFPTKVLIPKEP 483

Query: 61  DAFLPEAACLS-FLRTIM--------------ASIASREFPI*VLIPKE 120
           DA  P+AA LS FLR I+              ASI SREFP  VLIPKE
Sbjct: 484 DALWPKAAWLSYFLRAIVIGLAPLFSTGDCIGASIESREFPTKVLIPKE 532

Query: 121  180
           
Sbjct: 544  532

Query: 181  240
           
Sbjct: 604  532

Query: 241  283
           
Sbjct: 664  532

[Close]
BLAST of CU093432 vs. TrEMBL
Match: A0A0A0K4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-25
Identity = 60/80 (75.00%), Postives = 65/80 (81.25%), Query Frame = 2 

Query: 80  PGSALLYFFLRAIVMWLRPRAQSSTRIFLYRKNPMHSCPKQHVSPFYGRLWLRLRVESFL 139
           P +A   +FLRAI MWLRPRAQSSTRIFLYRKNPMHSCPKQHVSPFYGRLWLRLRVESFL
Sbjct: 120 PKAAWHSYFLRAIFMWLRPRAQSSTRIFLYRKNPMHSCPKQHVSPFYGRLWLRLRVESFL 179

Query: 140 Y------RF*YRRKPDALWP 199
           Y      +    ++PDALWP
Sbjct: 180 YSQEFPTKVLIPKEPDALWP 199

Query: 200  259
           
Sbjct: 240  199

Query: 260  302
           
Sbjct: 300  199


HSP 2 Score: 88.6 bits (218), Expect = 4.8e-15
Identity = 60/134 (44.78%), Postives = 64/134 (47.76%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALL-------------------------- 60
           QLYCSFRRESRVLHTSFNIEG RHILAWIGFALL                          
Sbjct: 424 QLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDCNVASTKSREFPTKVLIPKEP 483

Query: 61  ------------------------LSTSDCNVASAKSPELHTHFLIPKEPDAFLPEAACL 120
                                    ST DC  AS +S E  T  LIPKEPDA  P+AA L
Sbjct: 484 DALWPKAAWLSYFLRAIVIGLAPLFSTGDCIGASIESREFPTKVLIPKEPDALWPKAAWL 543

Query: 121 S-FLRTIMASIASR 180
           S FLR I+  +  R
Sbjct: 544 SYFLRAIVMWLRPR 557

Query: 181  240
           
Sbjct: 604  557

Query: 241  250
           
Sbjct: 664  557


HSP 3 Score: 78.6 bits (192), Expect = 5.0e-12
Identity = 47/79 (59.49%), Postives = 51/79 (64.56%), Query Frame = 1 

Query: 16  FRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEPDAFLP 75
           FRRES V     +I+  R ILA  GFALLLST DCNVAS KS E  T  LIPKEPDA  P
Sbjct: 251 FRRESEVPDAGSSIDATRCILAHSGFALLLSTGDCNVASTKSREFPTKVLIPKEPDALWP 310

Query: 76  EAACLS-FLRTIMASIASR 135
           +AA LS FLR I   +  R
Sbjct: 311 KAAWLSYFLRAIFMWLRPR 329

Query: 136  195
           
Sbjct: 371  329

Query: 196  250
           
Sbjct: 431  329


HSP 4 Score: 76.6 bits (187), Expect = 1.9e-11
Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 2 

Query: 5   CIVASDESLEFSTQVLI*KDPDTF*PGSALLYFFLRAIVMWLRPRAQSSTRIFLYRKNPM 64
           CI AS ES EF T+VLI K+PD   P +A L +FLRAIVMWLRPR +SS      +KNP+
Sbjct: 513 CIGASIESREFPTKVLIPKEPDALWPKAAWLSYFLRAIVMWLRPRVESSP-----QKNPI 572

Query: 65  HSCPKQHVSP-FYGRL-WLRLRVESFLYRF*YRRKPDALWPK 124
           HS PK+  S  FYG L W   R     +     ++ +  WPK
Sbjct: 573 HSSPKRLGSTIFYGGLYWGFYRKSRVPHAVFVPKELNEFWPK 609

Query: 125  184
           
Sbjct: 633  609

Query: 185  244
           
Sbjct: 693  609

Query: 245  304
           
Sbjct: 753  609


HSP 5 Score: 72.0 bits (175), Expect = 4.6e-10
Identity = 48/82 (58.54%), Postives = 54/82 (65.85%), Query Frame = 1 

Query: 16  FRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEPDAFLP 75
           FRRES V     +I+  R ILA  GFALLLSTSD  VASAKS E    FLIPK+   F P
Sbjct: 334 FRRESEVPDAGSSIDATRCILAHSGFALLLSTSDFYVASAKSREFPMQFLIPKK---FKP 393

Query: 76  EAACLS-FLRTIMASIASREFP 135
            AA +S FLR IMAS  S++FP
Sbjct: 394 VAAWISYFLRAIMASGESQKFP 412

Query: 136  195
           
Sbjct: 454  412

Query: 196  255
           
Sbjct: 514  412

Query: 256  259
           
Sbjct: 574  412


HSP 6 Score: 55.8 bits (133), Expect = 3.4e-05
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 2 

Query: 5   CIVASDESLEFSTQVLI*KDPDTF*PGSALLYFFLRAIVMWLRPRAQSSTR 64
           C VAS +S EF T+VLI K+PD   P +A L +FLRAI MWLRPR     R
Sbjct: 285 CNVASTKSREFPTKVLIPKEPDALWPKAAWLSYFLRAIFMWLRPRGDYGFR 335

Query: 65   124
           
Sbjct: 345  335

Query: 125  158
           
Sbjct: 405  335


HSP 7 Score: 52.8 bits (125), Expect = 2.9e-04
Identity = 28/44 (63.64%), Postives = 31/44 (70.45%), Query Frame = 2 

Query: 26  SLEFSTQVLI*KDPDTF*PGSALLYFFLRAIVMWLRPRAQSSTR 85
           S EF T+VLI K+PD   P     YFFLRAIVMWLRPR +SS R
Sbjct: 181 SQEFPTKVLIPKEPDALWPN----YFFLRAIVMWLRPRVESSPR 220

Query: 86   145
           
Sbjct: 241  220

Query: 146  158
           
Sbjct: 301  220


HSP 8 Score: 110.9 bits (276), Expect = 8.9e-22
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = -3 

Query: 84  SFGIKTYIGNSRLAIEAIIVRRKERHAASGKNASGSFGIRKCVWSSGLLAEATLQSLVER 143
           SFGIKTYIGNSRL+IEAIIV  KERHAASGKNASGSFGI++CVW+SGLLAEATLQS VE 
Sbjct: 26  SFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASGSFGIKECVWNSGLLAEATLQSPVES 85

Query: 144 SRAKPI 203
            RAKP+
Sbjct: 86  RRAKPL 91

Query: 204  263
           
Sbjct: 146  91

Query: 264  282
           
Sbjct: 206  91

[Close]
BLAST of CU093432 vs. TrEMBL
Match: A0A0A0K9A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279780 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-20
Identity = 63/83 (75.90%), Postives = 65/83 (78.31%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           +LY SF RESRVLHTSFN E  RHILA I FALL STS CNVASA+S E  THFLI KEP
Sbjct: 24  RLYRSFSRESRVLHTSFNTEETRHILARIIFALL-STSICNVASARSREFRTHFLILKEP 83

Query: 61  DAFLPEAACLS-FLRTIMASIAS 120
           DAF  EAACLS FLR IMASI S
Sbjct: 84  DAFSSEAACLSYFLRMIMASIES 105

Query: 121  180
           
Sbjct: 144  105

Query: 181  240
           
Sbjct: 204  105

Query: 241  247
           
Sbjct: 264  105

[Close]
BLAST of CU093432 vs. TrEMBL
Match: A0A0A0K9A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279780 PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 6.6e-01
Identity = 27/56 (48.21%), Postives = 29/56 (51.79%), Query Frame = 3 

Query: 54  YRRTPTHSSLDRLCSTSFYERL*CGFGQEPRAPHAFSYTERTRCILARSSMSLLST 113
           YR    HSS  RL S  F  RL   F +E R  H    TE TR ILAR   +LLST
Sbjct: 4   YRCNSMHSSPQRLGSPPFLGRLYRSFSRESRVLHTSFNTEETRHILARIIFALLST 59

Query: 114  173
           
Sbjct: 64   59

Query: 174  222
           
Sbjct: 124  59


HSP 2 Score: 89.7 bits (221), Expect = 2.1e-15
Identity = 58/108 (53.70%), Postives = 67/108 (62.04%), Query Frame = -3 

Query: 3   AIMRRVSFGIKTYIGNSRLAI---------EAIIVRRKERHAASGKNASGSFGIRKCVWS 62
           A MR+   G  + +G S + I          +II   + R      NAS SF IRK V +
Sbjct: 5   ARMRQKLRGELSSLGRSHITIAPTLQSPVESSIIKTLQARMRQVPSNASSSFDIRKYVEN 64

Query: 63  SGLLAEATLQSLVERSRAKPIQARMCRGPSILKLVWRTLDSRLKLQYN 122
           + LL EATLQS VER RAKPI+ARM R PSILKLVW TLDSRLKLQYN
Sbjct: 65  TRLLVEATLQSPVERRRAKPIRARMHRVPSILKLVWSTLDSRLKLQYN 112

Query: 123  182
           
Sbjct: 125  112

Query: 183  242
           
Sbjct: 185  112

Query: 243  300
           
Sbjct: 245  112

[Close]
BLAST of CU093432 vs. NCBI nr
Match: gi|700189168|gb|KGN44401.1| (hypothetical protein Csa_7G279830 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           QLYCSFRRESRVLHTSFNIEG RHILAWIGFALLLSTSD  VASAKSPELHTHFLIPKEP
Sbjct: 146 QLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDFYVASAKSPELHTHFLIPKEP 205

Query: 61  DAFLPEAACLSFLRTIMASIASREFPI 120
           DAFLPEAACLSF++TIMASI SREFPI
Sbjct: 206 DAFLPEAACLSFIQTIMASIESREFPI 232

Query: 121  180
           
Sbjct: 266  232

Query: 181  240
           
Sbjct: 326  232

Query: 241  262
           
Sbjct: 386  232

[Close]
BLAST of CU093432 vs. NCBI nr
Match: gi|700189170|gb|KGN44403.1| (hypothetical protein Csa_7G279850 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-30
Identity = 78/109 (71.56%), Postives = 80/109 (73.39%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           QLYCSFRRESRVLHTSFNIEG RHILAWIGFALLLSTSDCNVAS KS E  T  LIPKEP
Sbjct: 424 QLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDCNVASTKSREFPTKVLIPKEP 483

Query: 61  DAFLPEAACLS-FLRTIM--------------ASIASREFPI*VLIPKE 120
           DA  P+AA LS FLR I+              ASI SREFP  VLIPKE
Sbjct: 484 DALWPKAAWLSYFLRAIVIGLAPLFSTGDCIGASIESREFPTKVLIPKE 532

Query: 121  180
           
Sbjct: 544  532

Query: 181  240
           
Sbjct: 604  532

Query: 241  283
           
Sbjct: 664  532

[Close]
BLAST of CU093432 vs. NCBI nr
Match: gi|700189169|gb|KGN44402.1| (hypothetical protein Csa_7G279840 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-21
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = -3 

Query: 84  SFGIKTYIGNSRLAIEAIIVRRKERHAASGKNASGSFGIRKCVWSSGLLAEATLQSLVER 143
           SFGIKTYIGNSRL+IEAIIV  KERHAASGKNASGSFGI++CVW+SGLLAEATLQS VE 
Sbjct: 26  SFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASGSFGIKECVWNSGLLAEATLQSPVES 85

Query: 144 SRAKPI 203
            RAKP+
Sbjct: 86  RRAKPL 91

Query: 204  263
           
Sbjct: 146  91

Query: 264  282
           
Sbjct: 206  91

[Close]
BLAST of CU093432 vs. NCBI nr
Match: gi|700189163|gb|KGN44396.1| (hypothetical protein Csa_7G279780 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-21
Identity = 63/83 (75.90%), Postives = 65/83 (78.31%), Query Frame = 1 

Query: 1   QLYCSFRRESRVLHTSFNIEGPRHILAWIGFALLLSTSDCNVASAKSPELHTHFLIPKEP 60
           +LY SF RESRVLHTSFN E  RHILA I FALL STS CNVASA+S E  THFLI KEP
Sbjct: 24  RLYRSFSRESRVLHTSFNTEETRHILARIIFALL-STSICNVASARSREFRTHFLILKEP 83

Query: 61  DAFLPEAACLS-FLRTIMASIAS 120
           DAF  EAACLS FLR IMASI S
Sbjct: 84  DAFSSEAACLSYFLRMIMASIES 105

Query: 121  180
           
Sbjct: 144  105

Query: 181  240
           
Sbjct: 204  105

Query: 241  247
           
Sbjct: 264  105

[Close]
BLAST of CU093432 vs. NCBI nr
Match: gi|700189160|gb|KGN44393.1| (hypothetical protein Csa_7G279750 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-15
Identity = 58/108 (53.70%), Postives = 67/108 (62.04%), Query Frame = -3 

Query: 3   AIMRRVSFGIKTYIGNSRLAI---------EAIIVRRKERHAASGKNASGSFGIRKCVWS 62
           A MR+   G  + +G S + I          +II   + R      NAS SF IRK V +
Sbjct: 5   ARMRQKLRGELSSLGRSHITIAPTLQSPVESSIIKTLQARMRQVPSNASSSFDIRKYVEN 64

Query: 63  SGLLAEATLQSLVERSRAKPIQARMCRGPSILKLVWRTLDSRLKLQYN 122
           + LL EATLQS VER RAKPI+ARM R PSILKLVW TLDSRLKLQYN
Sbjct: 65  TRLLVEATLQSPVERRRAKPIRARMHRVPSILKLVWSTLDSRLKLQYN 112

Query: 123  182
           
Sbjct: 125  112

Query: 183  242
           
Sbjct: 185  112

Query: 243  300
           
Sbjct: 245  112

The following BLAST results are available for this feature:
BLAST of CU093432 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9A9_CUCSA6.9e-3893.10Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279830 PE=4 SV=1[more]
A0A0A0K9A9_CUCSA1.7e-1259.52Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279830 PE=4 SV=1[more]
A0A0A0K4J2_CUCSA1.8e-2575.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1[more]
A0A0A0K9A5_CUCSA2.9e-2075.90Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279780 PE=4 SV=1[more]
A0A0A0K9A5_CUCSA6.6e-0148.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279780 PE=4 SV=1[more]
BLAST of CU093432 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189168|gb|KGN44401.1|1.2e-3893.10hypothetical protein Csa_7G279830 [Cucumis sativus][more]
gi|700189170|gb|KGN44403.1|1.5e-3071.56hypothetical protein Csa_7G279850 [Cucumis sativus][more]
gi|700189169|gb|KGN44402.1|1.7e-2184.85hypothetical protein Csa_7G279840 [Cucumis sativus][more]
gi|700189163|gb|KGN44396.1|4.9e-2175.90hypothetical protein Csa_7G279780 [Cucumis sativus][more]
gi|700189160|gb|KGN44393.1|3.1e-1553.70hypothetical protein Csa_7G279750 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G279850Csa7G279850gene
Csa7G279840Csa7G279840gene
Csa7G279830Csa7G279830gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0007675H0007675EST
H0008737H0008737EST
H0115946H0115946EST