CU093223 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU093223
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMethyltransferase-like protein
LocationChr1 : 2780879 .. 2781272 (+)
Sequence length322
The following sequences are available for this feature:

transcribed_cluster sequence

CTGCTCCAAGGTGTCTTCGGGGTTCTGGACGTTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCATCGTCGAAGAGGCCTTCCGATTGACGATACGATGTCGGACTTGCGAGTGCTCCGACGGCCTGGGGCTCTCACCTTCTTCTGTTGTATGAATATAATTATCTCTTTTTCCCTTCCCACCTTCGAGTAGATTTTGTAAAATTCCTCTTCTGCTTCATATCCAGCATCGTCGTTAACATCTAAATCTGTATAATGTAATACAAAAATAACGTAAGGAATTAAGAAAACAAAACGTTTTAGTAGAAC
BLAST of CU093223 vs. TrEMBL
Match: A0A0A0LV42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-10
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 2

Query: 2   CSKVSSGFWTLVDMASGRYLWRHLFPSSKRPSD 61
           CSKVSSGFWTLVDMASGRYLWRHLFPSSK+PSD
Sbjct: 52  CSKVSSGFWTLVDMASGRYLWRHLFPSSKKPSD 84

Query: 62  101
           
Sbjct: 112 84

BLAST of CU093223 vs. NCBI nr
Match: gi|700208790|gb|KGN63886.1| (hypothetical protein Csa_1G025180 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 2

Query: 2   CSKVSSGFWTLVDMASGRYLWRHLFPSSKRPSD 61
           CSKVSSGFWTLVDMASGRYLWRHLFPSSK+PSD
Sbjct: 52  CSKVSSGFWTLVDMASGRYLWRHLFPSSKKPSD 84

Query: 62  101
           
Sbjct: 112 84

BLAST of CU093223 vs. NCBI nr
Match: gi|659107022|ref|XP_008453499.1| (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 31/33 (93.94%), Postives = 33/33 (100.00%), Query Frame = 2

Query: 2   CSKVSSGFWTLVDMASGRYLWRHLFPSSKRPSD 61
           CSKVSSGFWT+VDMASGRYLWRHLFPSSK+PSD
Sbjct: 52  CSKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD 84

Query: 62  101
           
Sbjct: 112 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LV42_CUCSA1.3e-1096.97Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208790|gb|KGN63886.1|4.9e-1196.97hypothetical protein Csa_1G025180 [Cucumis sativus][more]
gi|659107022|ref|XP_008453499.1|1.1e-1093.94PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025180Csa1G025180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0050499H0050499EST
H0094399H0094399EST
H0187437H0187437EST