CU092557 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU092557
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 2779102 .. 2780811 (-)
Sequence length358
The following sequences are available for this feature:

transcribed_cluster sequence

AGGCTGAGATTTGAGGTTGCGGAGAACGAAGAATCCGGCAAGCGTCGCTGAGAGAAATATGAGAATAAACCTCAGCGGACACATAATTTTTTTTGTTCTTCTTCTACTTCTTTCTCTAACCTCTGGATCCCCACCATATTCTGTGTTACTCAGTTTTGTTGAGTTGAGCCAAAATTGCAGCAGGGACTTCATTGTATTTCCAAGTTGACTCTCATCTAGACTTTAGCAAACCGAGCGATTGTAGCCAAAACTGATCTTAAACTACGGATGCCAGCTCCTGATTTTGAACTAACCATCATCAGAGGTTGCACAATTGACTTGTTTCGCGTGAGTCTCTCTTCAATTTGCATTGCTCTAC
BLAST of CU092557 vs. TrEMBL
Match: A0A0A0LPR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025170 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-14
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV
Sbjct: 490 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 535

Query: 279 338
           
Sbjct: 550 535

Query: 339 357
           
Sbjct: 610 535

BLAST of CU092557 vs. TrEMBL
Match: A0A151UA06_CAJCA (Putative GTP-binding protein engB OS=Cajanus cajan GN=KK1_020381 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-10
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = -3

Query: 222 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAK 281
           RAMQIEE L +NKS+VQPLMMVSSKSGAGIRSLR++LA I RFAK
Sbjct: 474 RAMQIEENLLQNKSLVQPLMMVSSKSGAGIRSLRTILANITRFAK 518

Query: 282 341
           
Sbjct: 534 518

Query: 342 357
           
Sbjct: 594 518

BLAST of CU092557 vs. TrEMBL
Match: A0A067LBI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17329 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-10
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEERL  NKSIVQP+MMVSSKSGAGI+SLR+VL  IARFAK+
Sbjct: 420 RAMQIEERLKANKSIVQPVMMVSSKSGAGIQSLRTVLTKIARFAKL 465

Query: 279 338
           
Sbjct: 480 465

Query: 339 357
           
Sbjct: 540 465

BLAST of CU092557 vs. TrEMBL
Match: A0A0D2MPA3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152200 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-10
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEE L  N+S+VQP+MMVSSKSGAGIRSLR+VL+ IARFAK+
Sbjct: 420 RAMQIEEGLKANRSVVQPVMMVSSKSGAGIRSLRTVLSKIARFAKI 465

Query: 279 338
           
Sbjct: 480 465

Query: 339 357
           
Sbjct: 540 465

BLAST of CU092557 vs. TrEMBL
Match: A0A0D2RN49_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152200 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-10
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEE L  N+S+VQP+MMVSSKSGAGIRSLR+VL+ IARFAK+
Sbjct: 448 RAMQIEEGLKANRSVVQPVMMVSSKSGAGIRSLRTVLSKIARFAKI 493

Query: 279 338
           
Sbjct: 508 493

Query: 339 357
           
Sbjct: 568 493

BLAST of CU092557 vs. NCBI nr
Match: gi|449439155|ref|XP_004137353.1| (PREDICTED: uncharacterized protein LOC101223165 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV
Sbjct: 490 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 535

Query: 279 338
           
Sbjct: 550 535

Query: 339 357
           
Sbjct: 610 535

BLAST of CU092557 vs. NCBI nr
Match: gi|659107010|ref|XP_008453496.1| (PREDICTED: uncharacterized protein LOC103494192 isoform X1 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-12
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEERLT NKSIVQPLMMVSSKSGAGIRSLR+VLA IARFAKV
Sbjct: 490 RAMQIEERLTGNKSIVQPLMMVSSKSGAGIRSLRTVLAKIARFAKV 535

Query: 279 338
           
Sbjct: 550 535

Query: 339 357
           
Sbjct: 610 535

BLAST of CU092557 vs. NCBI nr
Match: gi|659107018|ref|XP_008453498.1| (PREDICTED: uncharacterized protein LOC103494192 isoform X2 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-12
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEERLT NKSIVQPLMMVSSKSGAGIRSLR+VLA IARFAKV
Sbjct: 447 RAMQIEERLTGNKSIVQPLMMVSSKSGAGIRSLRTVLAKIARFAKV 492

Query: 279 338
           
Sbjct: 507 492

Query: 339 357
           
Sbjct: 567 492

BLAST of CU092557 vs. NCBI nr
Match: gi|729327003|ref|XP_010535339.1| (PREDICTED: uncharacterized protein LOC104810688 [Tarenaya hassleriana])

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = -3

Query: 219 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAKV 278
           RAMQIEE L  NKSIVQP+MMVSSKSG+GIRSLR+VLA IARFAKV
Sbjct: 426 RAMQIEENLKANKSIVQPVMMVSSKSGSGIRSLRTVLAKIARFAKV 471

Query: 279 338
           
Sbjct: 486 471

Query: 339 357
           
Sbjct: 546 471

BLAST of CU092557 vs. NCBI nr
Match: gi|1012364973|gb|KYP76155.1| (putative GTP-binding protein engB [Cajanus cajan])

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = -3

Query: 222 RAMQIEERLTRNKSIVQPLMMVSSKSGAGIRSLRSVLATIARFAK 281
           RAMQIEE L +NKS+VQPLMMVSSKSGAGIRSLR++LA I RFAK
Sbjct: 474 RAMQIEENLLQNKSLVQPLMMVSSKSGAGIRSLRTILANITRFAK 518

Query: 282 341
           
Sbjct: 534 518

Query: 342 357
           
Sbjct: 594 518

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LPR1_CUCSA2.1e-14100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025170 PE=3 SV=1[more]
A0A151UA06_CAJCA1.9e-1082.22Putative GTP-binding protein engB OS=Cajanus cajan GN=KK1_020381 PE=3 SV=1[more]
A0A067LBI2_JATCU2.4e-1082.61Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17329 PE=3 SV=1[more]
A0A0D2MPA3_GOSRA7.1e-1078.26Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152200 PE=3 SV=1[more]
A0A0D2RN49_GOSRA7.1e-1078.26Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152200 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|449439155|ref|XP_004137353.1|1.2e-13100.00PREDICTED: uncharacterized protein LOC101223165 [Cucumis sativus][more]
gi|659107010|ref|XP_008453496.1|8.3e-1293.48PREDICTED: uncharacterized protein LOC103494192 isoform X1 [Cucumis melo][more]
gi|659107018|ref|XP_008453498.1|8.3e-1293.48PREDICTED: uncharacterized protein LOC103494192 isoform X2 [Cucumis melo][more]
gi|729327003|ref|XP_010535339.1|5.9e-1084.78PREDICTED: uncharacterized protein LOC104810688 [Tarenaya hassleriana][more]
gi|1012364973|gb|KYP76155.1|1.0e-0982.22putative GTP-binding protein engB [Cajanus cajan][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025170Csa1G025170gene
Csa1G025180Csa1G025180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0031102H0031102EST
H0108396H0108396EST