CU092410 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU092410
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 1852652 .. 1852866 (-)
Sequence length223
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAAACCAACACTCAAACATCCAAATTCAATCCTCCATCTAATTACTTCATCTACACCATGGGTGGCAACAGGCAAAAGAAATCTCACTCATCTTTTTCAATCTTTAGCTTTTTCAAGTCCAGAAGGGGTCGAAAAGGAGACCACTACGACCATGGTGGCGCTTGGCCGGACGAGATGCCGAGATCCAACAAGGTGTGGCCAAGTGATGAGGACAA
BLAST of CU092410 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-09
Identity = 32/52 (61.54%), Postives = 32/52 (61.54%), Query Frame = 3

Query: 66  MGGNRQXXXXXXXXXXXXXXXXXXXXGDHYDHGGAWPDEMPRSNKVWPSDED 125
           MGGNRQ                    GDHYDHGGAWPDEMPRSNKVWPSDED
Sbjct: 1   MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDED 52

Query: 126 185
           
Sbjct: 61  52

Query: 186 222
           
Sbjct: 121 52

BLAST of CU092410 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-08
Identity = 31/52 (59.62%), Postives = 31/52 (59.62%), Query Frame = 3

Query: 66  MGGNRQXXXXXXXXXXXXXXXXXXXXGDHYDHGGAWPDEMPRSNKVWPSDED 125
           MGGNRQ                    GDHYDHGGAW DEMPRSNKVWPSDED
Sbjct: 1   MGGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDED 52

Query: 126 185
           
Sbjct: 61  52

Query: 186 222
           
Sbjct: 121 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|700190666|gb|KGN45870.1|1.4e-0961.54hypothetical protein Csa_6G014900 [Cucumis sativus][more]
gi|700190663|gb|KGN45867.1|2.0e-0859.62hypothetical protein Csa_6G014870 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G014900Csa6G014900gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OEE0IFKNP3UI02OEE0IEST
H0014644H0014644EST
H0065347H0065347EST