CU091729 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU091729
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11495130 .. 11503203 (+)
Sequence length393
The following sequences are available for this feature:

transcribed_cluster sequence

CAAGCAATCCAGAAAATCTAAGGTTAGCCCTTTCTCTTGCCATCTCTAATGTGATCAGCTTTTGAACTAGCTTCGCCGCCATCGTCGAGAGCATTCAAGTTCAGACTTAAATCCAAAGTGCTTTCGTTCAAATCTTGACGCACTGGACGATCGTTGTCCTGAGACTGACTTTTCTTCCATTGGCACGTCATTAATATCTGGTTTCTCATCTTGAAGCCTCCCCCTTGGTTGCTACTGTACTACTTGGTTCAACATCATCTGATTCTAAAGCTTCATCTTCGACATTATCAGTGGCTTCATTTTCTGCAGCCTTCGTTTTTTTGTTCCTCTAACACAGCAATCGGCATGTATTTTAAATTTTCGGCGAGGAGGCTCCTCTGTCACCGGTTGGGG
BLAST of CU091729 vs. TrEMBL
Match: A0A0A0LVV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.6e-10
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = -2

Query: 27  KKSQSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 86
           ++SQSQDNDRPVRQDLNEST            GGEASSKADHIRDGKRKG
Sbjct: 62  EESQSQDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 111

Query: 87  146
           
Sbjct: 122 111

Query: 147 177
           
Sbjct: 182 111

BLAST of CU091729 vs. TrEMBL
Match: A0A0A0LVV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.3e-08
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -3

Query: 218 NKKTKAAENEATDNVEDEALESDDVEPSSTVATKGE 277
            +K +AAENEATDNVEDEALESDDVEPSSTVATKGE
Sbjct: 13  EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGE 48

Query: 278 326
           
Sbjct: 73  48


HSP 2 Score: 38.5 bits (88), Expect = 7.4e+00
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = -1

Query: 172 RGRLQDEKPDINDVPMEE 226
           +G LQDEKPDINDVPMEE
Sbjct: 46  KGELQDEKPDINDVPMEE 63

BLAST of CU091729 vs. NCBI nr
Match: gi|449465421|ref|XP_004150426.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 51/109 (46.79%), Postives = 59/109 (54.13%), Query Frame = -2

Query: 27  KYMPIAVLEEQKNEGCRK*SH**CRR*SFRIR*C*TK*YSSNQGGGFKMRNQILMTCQWK 86
           KYMPIAVLEEQKNE     +       +            + +G   +     +     +
Sbjct: 112 KYMPIAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVATKGE-LQDEKPDINDVPME 171

Query: 87  KSQSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 146
           +SQSQDNDRPVRQDLNEST            GGEASSKADHIRDGKRKG
Sbjct: 172 ESQSQDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 219

Query: 147 206
           
Sbjct: 232 219

Query: 207 266
           
Sbjct: 292 219

Query: 267 326
           
Sbjct: 352 219

Query: 327 354
           
Sbjct: 412 219

BLAST of CU091729 vs. NCBI nr
Match: gi|659118143|ref|XP_008458968.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-12
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = -2

Query: 27  KYMPIAVLEEQKNEGCRK*SH**CRR*SFRIR*C*TK*YSSNQGGGFKMRNQILMTCQWK 86
           KY+PIAVLEEQKNE     +       + +          + +G   +     +     +
Sbjct: 112 KYIPIAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGE-LQDEKPDINDVPME 171

Query: 87  KSQSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 146
           +SQSQDND PVRQDLNEST            GGE SSKADHIRDGKRKG
Sbjct: 172 ESQSQDNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 219

Query: 147 206
           
Sbjct: 232 219

Query: 207 266
           
Sbjct: 292 219

Query: 267 326
           
Sbjct: 352 219

Query: 327 354
           
Sbjct: 412 219

BLAST of CU091729 vs. NCBI nr
Match: gi|659118145|ref|XP_008458970.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11
Identity = 46/109 (42.20%), Postives = 58/109 (53.21%), Query Frame = -2

Query: 27  KYMPIAVLEEQKNEGCRK*SH**CRR*SFRIR*C*TK*YSSNQGGGFKMRNQILMTCQWK 86
           KY+PIAVLEEQKNE     +       + +          + +G   +++++        
Sbjct: 112 KYIPIAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKG---ELQDEKPDINDVP 171

Query: 87  KSQSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 146
             +SQDND PVRQDLNEST            GGE SSKADHIRDGKRKG
Sbjct: 172 MEESQDNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

Query: 147 206
           
Sbjct: 232 217

Query: 207 266
           
Sbjct: 292 217

Query: 267 326
           
Sbjct: 352 217

Query: 327 354
           
Sbjct: 412 217

BLAST of CU091729 vs. NCBI nr
Match: gi|700209983|gb|KGN65079.1| (hypothetical protein Csa_1G195230 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = -2

Query: 27  KKSQSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 86
           ++SQSQDNDRPVRQDLNEST            GGEASSKADHIRDGKRKG
Sbjct: 62  EESQSQDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 111

Query: 87  146
           
Sbjct: 122 111

Query: 147 177
           
Sbjct: 182 111

BLAST of CU091729 vs. NCBI nr
Match: gi|778659850|ref|XP_011655175.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 9.5e-09
Identity = 34/47 (72.34%), Postives = 35/47 (74.47%), Query Frame = -2

Query: 27  QSQDNDRPVRQDLNESTXXXXXXXXXXXXGGEASSKADHIRDGKRKG 86
           +SQDNDRPVRQDLNEST            GGEASSKADHIRDGKRKG
Sbjct: 171 ESQDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 217

Query: 87  146
           
Sbjct: 231 217

Query: 147 168
           
Sbjct: 291 217

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVV2_CUCSA4.6e-1072.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1[more]
A0A0A0LVV2_CUCSA4.3e-0888.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449465421|ref|XP_004150426.1|2.8e-1346.79PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus][more]
gi|659118143|ref|XP_008458968.1|3.1e-1244.04PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo][more]
gi|659118145|ref|XP_008458970.1|5.9e-1142.20PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo][more]
gi|700209983|gb|KGN65079.1|1.1e-0972.00hypothetical protein Csa_1G195230 [Cucumis sativus][more]
gi|778659850|ref|XP_011655175.1|9.5e-0972.34PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G195230Csa1G195230gene
Csa1G195240Csa1G195240gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0190536G0190536EST
H0012546H0012546EST
H0077781H0077781EST