CU091457 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU091457
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9897249 .. 9903656 (-)
Sequence length227
The following sequences are available for this feature:

transcribed_cluster sequence

TCCCCGTAGAAATAGTAGAGCCAAGCCGCTTTTGGCCAAAATTCATTAAGTTCCTTCGGTACAAAAACTGCATGGGGAACTCTCGACTCTTGGCCGAAGCCACATTTCAATCGCACGTAGAAAGGAGAGCCATGCCATTTCGTGGTAGAATGCGTCAGGTTCCTTCGGTATCAAAACTTTTGGTGGGGAACTCTCGACTTTTCGATAGAAGCCCCAATACAATCCCT
BLAST of CU091457 vs. TrEMBL
Match: A0A0A0K4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-09
Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = -1

Query: 9   RRNLTHSTTKWHGSP-FYVRLKCGFGQESRVPHAVFVPKELNEFWPKAAWLYYF 68
           ++N  HS+ K  GS  FY  L  GF ++SRVPHAVFVPKELNEFWPKA WL YF
Sbjct: 563 QKNPIHSSPKRLGSTIFYGGLYWGFYRKSRVPHAVFVPKELNEFWPKADWLPYF 616

Query: 69  128
           
Sbjct: 623 616

Query: 129 168
           
Sbjct: 683 616

BLAST of CU091457 vs. TrEMBL
Match: A0A0A0K4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-09
Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = -3

Query: 49  GLYWGFYRKVESSPPKVLIPKEPDAFYHEMAWLS-FLRAIEMWLRPRVESSPCSFCTEGT 108
           GLYWGFYRK    P  V +PKE + F+ +  WL  FLR I + L  +VESSPCSFCTEGT
Sbjct: 582 GLYWGFYRK-SRVPHAVFVPKELNEFWPKADWLPYFLRGIVLGLLSKVESSPCSFCTEGT 640

Query: 109 168
           
Sbjct: 642 640

Query: 169 226
           
Sbjct: 702 640


HSP 2 Score: 62.4 bits (150), Expect = 2.7e-07
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -3

Query: 73  PPKVLIPKEPDAFYHEMAWLS-FLRAIEMWLRPRVESSP 132
           P KVLIPKEPDA + + AWLS FLRAI MWLRPRVESSP
Sbjct: 524 PTKVLIPKEPDALWPKAAWLSYFLRAIVMWLRPRVESSP 562

Query: 133 187
           
Sbjct: 584 562


HSP 3 Score: 56.2 bits (134), Expect = 2.0e-05
Identity = 37/72 (51.39%), Postives = 40/72 (55.56%), Query Frame = -3

Query: 13  KVESSPPKVLIPKEPDAFYHEMAWLS-FLRAIEMWLRPR--------VESSPCSFCTEGT 72
           K    P KVLIPKEPDA + + AWLS FLRAI MWLRPR         E        + T
Sbjct: 291 KSREFPTKVLIPKEPDALWPKAAWLSYFLRAIFMWLRPRGDYGFRRESEVPDAGSSIDAT 350

Query: 73  **ILAKSGLALL 132
             ILA SG ALL
Sbjct: 351 RCILAHSGFALL 362

Query: 133 192
           
Sbjct: 411 362

Query: 193 202
           
Sbjct: 471 362


HSP 4 Score: 56.2 bits (134), Expect = 2.0e-05
Identity = 36/66 (54.55%), Postives = 39/66 (59.09%), Query Frame = -3

Query: 1   PPKVLIPKEPDAFYHEMAWLSFLRAIEMWLRPRVESSP----CSFCTEGT**ILAKSGLA 60
           P KVLIPKEPDA +       FLRAI MWLRPRVESSP           T  I A+SGL 
Sbjct: 185 PTKVLIPKEPDALWPNYF---FLRAIVMWLRPRVESSPRKSRVPHAISNTKEIQARSGLD 244

Query: 61  LLFLRG 120
           LL  +G
Sbjct: 245 LLLSKG 247

Query: 121 180
           
Sbjct: 305 247

Query: 181 187
           
Sbjct: 365 247


HSP 5 Score: 45.1 bits (105), Expect = 4.5e-02
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = -3

Query: 70  KVESSPPKVLIPKEPDAFYHEMAWLS-FLRAIEMWLRPRVESSPC 129
           K    P KVLIPKEPDA + + AWLS FLRAI + L P   +  C
Sbjct: 469 KSREFPTKVLIPKEPDALWPKAAWLSYFLRAIVIGLAPLFSTGDC 513

Query: 130 189
           
Sbjct: 529 513

Query: 190 202
           
Sbjct: 589 513


HSP 6 Score: 42.0 bits (97), Expect = 3.8e-01
Identity = 26/48 (54.17%), Postives = 29/48 (60.42%), Query Frame = -2

Query: 62  KSREFPTKSFDTEGT*RILPRNGMALL-STCD*NVASAKSREFPMQFL 121
           +  E P      + T  IL  +G ALL ST D  VASAKSREFPMQFL
Sbjct: 336 RESEVPDAGSSIDATRCILAHSGFALLLSTSDFYVASAKSREFPMQFL 383

Query: 122 181
           
Sbjct: 396 383

Query: 182 203
           
Sbjct: 456 383


HSP 7 Score: 42.0 bits (97), Expect = 3.8e-01
Identity = 22/42 (52.38%), Postives = 24/42 (57.14%), Query Frame = -3

Query: 76  PDAFYHEMAWLS--------------FLRAIEMWLRPRVESS 135
           PDAF+HE  WLS              FLRAI MWLRPR +SS
Sbjct: 102 PDAFWHEAIWLSYFLRVIPKAAWHSYFLRAIFMWLRPRAQSS 143

Query: 136 160
           
Sbjct: 162 143


HSP 8 Score: 40.0 bits (92), Expect = 1.4e+00
Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = -2

Query: 62  SFDTEGT*RILPRNGMALL-STCD*NVASAKSREFPMQFL 121
           SF+ EGT  IL   G ALL ST D NVAS KSREFP + L
Sbjct: 439 SFNIEGTRHILAWIGFALLLSTSDCNVASTKSREFPTKVL 478

Query: 122 179
           
Sbjct: 499 478


HSP 9 Score: 36.2 bits (82), Expect = 2.1e+01
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = -2

Query: 62  KSREFPTKSFDTEGT*RILPRNGMALL-STCD*NVASAKSREFPMQFL 121
           +  E P      + T  IL  +G ALL ST D NVAS KSREFP + L
Sbjct: 253 RESEVPDAGSSIDATRCILAHSGFALLLSTGDCNVASTKSREFPTKVL 300

Query: 122 181
           
Sbjct: 313 300

Query: 182 203
           
Sbjct: 373 300


HSP 10 Score: 30.4 bits (67), Expect = 1.1e+03
Identity = 11/31 (35.48%), Postives = 18/31 (58.06%), Query Frame = -1

Query: 9   GFGQESRVPHAVFVPKELNEFWPKAAWLYYF 68
           G G+  +    + + K+L  FW +A+WL YF
Sbjct: 48  GIGKSRKCKKQIHIAKKLYAFWLEASWLSYF 78

Query: 69  102
           
Sbjct: 108 78

BLAST of CU091457 vs. NCBI nr
Match: gi|700189170|gb|KGN44403.1| (hypothetical protein Csa_7G279850 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.9e-10
Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = -3

Query: 49  GLYWGFYRKVESSPPKVLIPKEPDAFYHEMAWLS-FLRAIEMWLRPRVESSPCSFCTEGT 108
           GLYWGFYRK    P  V +PKE + F+ +  WL  FLR I + L  +VESSPCSFCTEGT
Sbjct: 582 GLYWGFYRK-SRVPHAVFVPKELNEFWPKADWLPYFLRGIVLGLLSKVESSPCSFCTEGT 640

Query: 109 168
           
Sbjct: 642 640

Query: 169 226
           
Sbjct: 702 640

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K4J2_CUCSA3.8e-0964.81Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1[more]
A0A0A0K4J2_CUCSA3.8e-0958.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700189170|gb|KGN44403.1|2.9e-1058.33hypothetical protein Csa_7G279850 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G279850Csa7G279850gene
Csa7G279830Csa7G279830gene
Csa7G279840Csa7G279840gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0175613G0175613EST
H0006354H0006354EST