CU089124 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU089124
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNo hit
LocationChr1 : 712285 .. 729751 (-)
Sequence length357
The following sequences are available for this feature:

transcribed_cluster sequence

CGTTTTAGTTAGTATTCAAACGAATTGGTATGTCACACATATTTGTTAATAATGGTTTCAATATTCATCCATGATTTTCGTTTTTACTAATTGATGGAATACATACAGGTTATTGTCCTGCAAGAGAAACTAACAGAGAAGGAACGCCAGATTGAAACTTTGAAGGAAACTTTACAACAGCCGAGGAGCCCATTAGTTGAGGATAAAGCTGTTTCCCCATCCACCGAGAAGCCCAAAGACGAGATGATTATATCCACCGATGCCGAAAAGCTGAGATGATGATGATGATGATGAAACCATATCCCTCATACTAGTTTTCATAATTTTGCATCTAATCAACTATTTTCCTCCTGTAAT
BLAST of CU089124 vs. NCBI nr
Match: gi|449440648|ref|XP_004138096.1| (PREDICTED: FKBP12-interacting protein of 37 kDa [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 1

Query: 109 VIVLQEKLTEKERQIETLKETLQQPRSPLVEDKAVSPSTEKPKDEMIISTDAE 168
           VIVLQEKL EKERQIETLKETLQQPRSPLVEDKAVSP TEKPKDEMIISTDAE
Sbjct: 290 VIVLQEKLAEKERQIETLKETLQQPRSPLVEDKAVSPPTEKPKDEMIISTDAE 342

Query: 169 228
           
Sbjct: 350 342

Query: 229 268
           
Sbjct: 410 342

BLAST of CU089124 vs. NCBI nr
Match: gi|659129109|ref|XP_008464533.1| (PREDICTED: FKBP12-interacting protein of 37 kDa [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-11
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 1

Query: 109 VIVLQEKLTEKERQIETLKETL-QQPRSPLVEDKAVSPSTEK---PKDEMIISTDAE 168
           VIVLQEKL EKER+I+TL+ETL QQP+SP+VEDKAVSP TE    PKDEMIIS DAE
Sbjct: 290 VIVLQEKLAEKEREIQTLRETLQQQPKSPIVEDKAVSPPTENPQLPKDEMIISADAE 346

Query: 169 228
           
Sbjct: 350 346

Query: 229 268
           
Sbjct: 410 346

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|449440648|ref|XP_004138096.1|3.9e-1796.23PREDICTED: FKBP12-interacting protein of 37 kDa [Cucumis sativus][more]
gi|659129109|ref|XP_008464533.1|2.4e-1177.19PREDICTED: FKBP12-interacting protein of 37 kDa [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G004220Csa1G004220gene
Csa1G004210Csa1G004210gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0050974G0050974EST
H0111667H0111667EST
H0153410H0153410EST