MELO3C034924.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C034924.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionflocculation protein FLO11-like
Locationchr11 : 9808793 .. 9809041 (+)
Sequence length249
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATGGTGTTGAGATTTGCCCCTGGTGATCATAATGTCGAAGTTCCTGTTGCTGATACTGTTGATCCAAGTGCTCAACAAGAAACTCCATTAGTTCCTACAGAACCAAAGCCGTCTAGGAAGAAAGGTCAACAACTTCGAAGAAACATTACTACCAAAGCTGGTCGAAAGAAAATTCCTCTCAATATTCCATCAATCCAAATTGATGGTATATCATTTCATCTTGAGGAAAACGTACAGCGTTAG

mRNA sequence

ATGTCGATGGTGTTGAGATTTGCCCCTGGTGATCATAATGTCGAAGTTCCTGTTGCTGATACTGTTGATCCAAGTGCTCAACAAGAAACTCCATTAGTTCCTACAGAACCAAAGCCGTCTAGGAAGAAAGGTCAACAACTTCGAAGAAACATTACTACCAAAGCTGGTCGAAAGAAAATTCCTCTCAATATTCCATCAATCCAAATTGATGGTATATCATTTCATCTTGAGGAAAACGTACAGCGTTAG

Coding sequence (CDS)

ATGTCGATGGTGTTGAGATTTGCCCCTGGTGATCATAATGTCGAAGTTCCTGTTGCTGATACTGTTGATCCAAGTGCTCAACAAGAAACTCCATTAGTTCCTACAGAACCAAAGCCGTCTAGGAAGAAAGGTCAACAACTTCGAAGAAACATTACTACCAAAGCTGGTCGAAAGAAAATTCCTCTCAATATTCCATCAATCCAAATTGATGGTATATCATTTCATCTTGAGGAAAACGTACAGCGTTAG

Protein sequence

MSMVLRFAPGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQIDGISFHLEENVQR
Homology
[Close]
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match: XP_008437685.1 (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 8   APGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSI 67
           APGDHN EVPVADTVDPSAQQET  VPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPS+
Sbjct: 135 APGDHNDEVPVADTVDPSAQQETLSVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSV 194

Query: 68  QI-DGISFHLEENVQR 83
            I DGISFHLEENVQR
Sbjct: 195 PIVDGISFHLEENVQR 210

[Close]
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match: XP_008454699.1 (PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-26
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 8   APGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSI 67
           APGD+N EVPVADTVDP AQQE   VPTE KP+RKKGQQ+RRNITTKAGRKKIPLNIPS+
Sbjct: 62  APGDYNDEVPVADTVDPGAQQEPSSVPTELKPARKKGQQIRRNITTKAGRKKIPLNIPSV 121

Query: 68  QIDGISFHLEENVQR 83
            IDGISFHLEEN+ R
Sbjct: 122 PIDGISFHLEENIHR 136

[Close]
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match: XP_008464590.1 (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 63/74 (85.14%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 9   PGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQ 68
           P DHN EVPVADT+DPSAQQ+TP VPTE K SRKKGQQLRRNITTKAGRKKIPLNIPS+ 
Sbjct: 70  PSDHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVP 129

Query: 69  IDGISFHLEENVQR 83
           I GISFH EENVQR
Sbjct: 130 IYGISFHHEENVQR 143

[Close]
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match: XP_008454855.1 (PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-24
Identity = 61/71 (85.92%), Postives = 64/71 (90.14%), Query Frame = 0 

Query: 11  DHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQID 70
           DHN EV VAD+VD SAQQETPLV TEPKPSRKKGQQL+RNITTK GRKKIPLNIPS+ ID
Sbjct: 146 DHNEEVHVADSVDSSAQQETPLVSTEPKPSRKKGQQLQRNITTKVGRKKIPLNIPSVPID 205

Query: 71  GISFHLEENVQ 82
           GI FHLEENVQ
Sbjct: 206 GIFFHLEENVQ 216

[Close]
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match: XP_008463460.1 (PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0 

Query: 28  QETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQIDGISFHLEENVQR 83
           QET  VPTEPKPSRKK QQ RRNITTK GRKK+PLNIPS+ IDGISFHLEE+VQR
Sbjct: 132 QETQSVPTEPKPSRKKVQQNRRNITTKTGRKKVPLNIPSVPIDGISFHLEESVQR 186

[Close]
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match: tr|A0A1S3AV82|A0A1S3AV82_CUCME (uncharacterized protein LOC103483026 OS=Cucumis melo OX=3656 GN=LOC103483026 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-28
Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 8   APGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSI 67
           APGDHN EVPVADTVDPSAQQET  VPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPS+
Sbjct: 135 APGDHNDEVPVADTVDPSAQQETLSVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSV 194

Query: 68  QI-DGISFHLEENVQR 83
            I DGISFHLEENVQR
Sbjct: 195 PIVDGISFHLEENVQR 210

[Close]
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match: tr|A0A1S3C0F4|A0A1S3C0F4_CUCME (uncharacterized protein LOC103495053 OS=Cucumis melo OX=3656 GN=LOC103495053 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-26
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 8   APGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSI 67
           APGD+N EVPVADTVDP AQQE   VPTE KP+RKKGQQ+RRNITTKAGRKKIPLNIPS+
Sbjct: 62  APGDYNDEVPVADTVDPGAQQEPSSVPTELKPARKKGQQIRRNITTKAGRKKIPLNIPSV 121

Query: 68  QIDGISFHLEENVQR 83
            IDGISFHLEEN+ R
Sbjct: 122 PIDGISFHLEENIHR 136

[Close]
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match: tr|A0A1S3CND8|A0A1S3CND8_CUCME (uncharacterized protein LOC103502436 OS=Cucumis melo OX=3656 GN=LOC103502436 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.0e-26
Identity = 63/74 (85.14%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 9   PGDHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQ 68
           P DHN EVPVADT+DPSAQQ+TP VPTE K SRKKGQQLRRNITTKAGRKKIPLNIPS+ 
Sbjct: 70  PSDHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVP 129

Query: 69  IDGISFHLEENVQR 83
           I GISFH EENVQR
Sbjct: 130 IYGISFHHEENVQR 143

[Close]
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match: tr|A0A1S3BZ31|A0A1S3BZ31_CUCME (uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-24
Identity = 61/71 (85.92%), Postives = 64/71 (90.14%), Query Frame = 0 

Query: 11  DHNVEVPVADTVDPSAQQETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQID 70
           DHN EV VAD+VD SAQQETPLV TEPKPSRKKGQQL+RNITTK GRKKIPLNIPS+ ID
Sbjct: 146 DHNEEVHVADSVDSSAQQETPLVSTEPKPSRKKGQQLQRNITTKVGRKKIPLNIPSVPID 205

Query: 71  GISFHLEENVQ 82
           GI FHLEENVQ
Sbjct: 206 GIFFHLEENVQ 216

[Close]
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match: tr|A0A1S3CJR8|A0A1S3CJR8_CUCME (uncharacterized protein LOC103501627 OS=Cucumis melo OX=3656 GN=LOC103501627 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-16
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0 

Query: 28  QETPLVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSIQIDGISFHLEENVQR 83
           QET  VPTEPKPSRKK QQ RRNITTK GRKK+PLNIPS+ IDGISFHLEE+VQR
Sbjct: 132 QETQSVPTEPKPSRKKVQQNRRNITTKTGRKKVPLNIPSVPIDGISFHLEESVQR 186

The following BLAST results are available for this feature:
BLAST of MELO3C034924.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008437685.11.7e-2892.11PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo][more]
XP_008454699.18.0e-2682.67PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo][more]
XP_008464590.11.4e-2585.14PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo][more]
XP_008454855.13.4e-2485.92PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo][more]
XP_008463460.15.7e-1683.64PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo][more]
BLAST of MELO3C034924.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034924.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034924.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AV82|A0A1S3AV82_CUCME1.1e-2892.11uncharacterized protein LOC103483026 OS=Cucumis melo OX=3656 GN=LOC103483026 PE=... [more]
tr|A0A1S3C0F4|A0A1S3C0F4_CUCME5.3e-2682.67uncharacterized protein LOC103495053 OS=Cucumis melo OX=3656 GN=LOC103495053 PE=... [more]
tr|A0A1S3CND8|A0A1S3CND8_CUCME9.0e-2685.14uncharacterized protein LOC103502436 OS=Cucumis melo OX=3656 GN=LOC103502436 PE=... [more]
tr|A0A1S3BZ31|A0A1S3BZ31_CUCME2.2e-2485.92uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=... [more]
tr|A0A1S3CJR8|A0A1S3CJR8_CUCME3.8e-1683.64uncharacterized protein LOC103501627 OS=Cucumis melo OX=3656 GN=LOC103501627 PE=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034924.2MELO3C034924.2gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034924.2.1.CDS.1MELO3C034924.2.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034924.2.1.exon.1MELO3C034924.2.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034924.2.1MELO3C034924.2.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..56