MELO3C034604.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C034604.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionATP-binding/protein serine/threonine kinase
Locationchr11 : 1512785 .. 1513261 (-)
Sequence length379
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATCATATAATACTAACCCAACTTAGACATTTGAATATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGGTATATATATAAATCCATTTCAATTGTTTATAGATAATTTTTTTCTTCATCGCGATTGTTATCCTATCATGTGATAATTAACAATTAAAATATTTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGAATGGGAAATATTAACATATATTATCCACTCCCAAATTAGATCTACCTACATAGCTCATATATAAATTGATAGAAATGTATTTTTAC

mRNA sequence

CTAATCATATAATACTAACCCAACTTAGACATTTGAATATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGAATGGGAAATATTAACATATATTATCCACTCCCAAATTAGATCTACCTACATAGCTCATATATAAATTGATAGAAATGTATTTTTAC

Coding sequence (CDS)

ATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGA

Protein sequence

MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLHKDFPEYLGEEKTTWLLKN
Homology
[Close]
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match: KGN61993.1 (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-37
Identity = 76/83 (91.57%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKDFPEYLGEEKTTWLLK 84
          EKKFLH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKDFPEYLGEEK 78
          LEKKFLHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match: EOY32073.1 (Uncharacterized protein TCM_039538 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

[Close]
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match: tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-37
Identity = 76/83 (91.57%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKDFPEYLGEEKTTWLLK 84
          EKKFLH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match: tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-29
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKDFPEYLGEEK 78
          LEKKFLHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match: tr|A0A1R3GI95|A0A1R3GI95_9ROSI (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-04
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match: tr|A0A061GY75|A0A061GY75_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match: tr|A0A061GRN9|A0A061GRN9_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

The following BLAST results are available for this feature:
BLAST of MELO3C034604.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61993.17.9e-3791.57hypothetical protein Csa_2G285280 [Cucumis sativus][more]
KGN61957.12.1e-2983.33hypothetical protein Csa_2G276990 [Cucumis sativus][more]
OMO57769.11.8e-0442.37ATP-binding/protein serine/threonine kinase [Corchorus olitorius][more]
EOY32073.13.0e-0447.17Uncharacterized protein TCM_039538 [Theobroma cacao][more]
EOY32074.13.0e-0447.17Uncharacterized protein TCM_039540 [Theobroma cacao][more]
BLAST of MELO3C034604.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034604.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034604.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA5.2e-3791.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA1.4e-2983.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
tr|A0A1R3GI95|A0A1R3GI95_9ROSI1.2e-0442.37ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C... [more]
tr|A0A061GY75|A0A061GY75_THECC2.0e-0447.17Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1[more]
tr|A0A061GRN9|A0A061GRN9_THECC2.0e-0447.17Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016301 kinase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034604.2MELO3C034604.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034604.2.1MELO3C034604.2.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034604.2.1.five_prime_UTR.1MELO3C034604.2.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034604.2.1.exon.2MELO3C034604.2.1.exon.2exon
MELO3C034604.2.1.exon.1MELO3C034604.2.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034604.2.1.CDS.2MELO3C034604.2.1.CDS.2CDS
MELO3C034604.2.1.CDS.1MELO3C034604.2.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034604.2.1.three_prime_UTR.1MELO3C034604.2.1.three_prime_UTR.1three_prime_UTR