MELO3C034604.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034604.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP-binding/protein serine/threonine kinase
Location	chr11 : 1512785 .. 1513261 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATCATATAATACTAACCCAACTTAGACATTTGAATATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGGTATATATATAAATCCATTTCAATTGTTTATAGATAATTTTTTTCTTCATCGCGATTGTTATCCTATCATGTGATAATTAACAATTAAAATATTTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGAATGGGAAATATTAACATATATTATCCACTCCCAAATTAGATCTACCTACATAGCTCATATATAAATTGATAGAAATGTATTTTTAC

mRNA sequence

CTAATCATATAATACTAACCCAACTTAGACATTTGAATATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGAATGGGAAATATTAACATATATTATCCACTCCCAAATTAGATCTACCTACATAGCTCATATATAAATTGATAGAAATGTATTTTTAC

Coding sequence (CDS)

ATGGTGAAGTCCTCAACTAAGTTCGCTCTTTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACATGGCTCCTTAAAAACTGA

Protein sequence

MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLHKDFPEYLGEEKTTWLLKN

Homology

[Close]

BLAST of MELO3C034604.2 vs. NCBI nr
Match: KGN61993.1 (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-37
Identity = 76/83 (91.57%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKDFPEYLGEEKTTWLLK 84
          EKKFLH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034604.2 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKDFPEYLGEEK 78
          LEKKFLHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034604.2 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]

BLAST of MELO3C034604.2 vs. NCBI nr
Match: EOY32073.1 (Uncharacterized protein TCM_039538 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

[Close]

BLAST of MELO3C034604.2 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]

BLAST of MELO3C034604.2 vs. TrEMBL
Match: tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-37
Identity = 76/83 (91.57%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKDFPEYLGEEKTTWLLK 84
          EKKFLH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034604.2 vs. TrEMBL
Match: tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-29
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKDFPEYLGEEK 78
          LEKKFLHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034604.2 vs. TrEMBL
Match: tr|A0A1R3GI95|A0A1R3GI95_9ROSI (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-04
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]

BLAST of MELO3C034604.2 vs. TrEMBL
Match: tr|A0A061GY75|A0A061GY75_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]

BLAST of MELO3C034604.2 vs. TrEMBL
Match: tr|A0A061GRN9|A0A061GRN9_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

The following BLAST results are available for this feature:

BLAST of MELO3C034604.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61993.1	7.9e-37	91.57	hypothetical protein Csa_2G285280 [Cucumis sativus]	[more]
KGN61957.1	2.1e-29	83.33	hypothetical protein Csa_2G276990 [Cucumis sativus]	[more]
OMO57769.1	1.8e-04	42.37	ATP-binding/protein serine/threonine kinase [Corchorus olitorius]	[more]
EOY32073.1	3.0e-04	47.17	Uncharacterized protein TCM_039538 [Theobroma cacao]	[more]
EOY32074.1	3.0e-04	47.17	Uncharacterized protein TCM_039540 [Theobroma cacao]	[more]

BLAST of MELO3C034604.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034604.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034604.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJR0\|A0A0A0LJR0_CUCSA	5.2e-37	91.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1	[more]
tr\|A0A0A0LMG3\|A0A0A0LMG3_CUCSA	1.4e-29	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1	[more]
tr\|A0A1R3GI95\|A0A1R3GI95_9ROSI	1.2e-04	42.37	ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C...	[more]
tr\|A0A061GY75\|A0A061GY75_THECC	2.0e-04	47.17	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1	[more]
tr\|A0A061GRN9\|A0A061GRN9_THECC	2.0e-04	47.17	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034604.2.1	MELO3C034604.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034604.2	Watermelon (97103) v2	medwmbB082
MELO3C034604.2	Watermelon (97103) v2	medwmbB105
MELO3C034604.2	Wax gourd	medwgoB133
MELO3C034604.2	Cucumber (Gy14) v2	cgybmedB074
MELO3C034604.2	Cucumber (Gy14) v2	cgybmedB449
MELO3C034604.2	Cucumber (Gy14) v1	cgymedB148
MELO3C034604.2	Cucumber (Gy14) v1	cgymedB608
MELO3C034604.2	Cucurbita maxima (Rimu)	cmamedB580
MELO3C034604.2	Cucurbita maxima (Rimu)	cmamedB628
MELO3C034604.2	Cucurbita moschata (Rifu)	cmomedB568
MELO3C034604.2	Cucurbita moschata (Rifu)	cmomedB617
MELO3C034604.2	Cucurbita pepo (Zucchini)	cpemedB253
MELO3C034604.2	Cucurbita pepo (Zucchini)	cpemedB293
MELO3C034604.2	Wild cucumber (PI 183967)	cpimedB081
MELO3C034604.2	Cucurbita pepo (Zucchini)	cpemedB786
MELO3C034604.2	Wild cucumber (PI 183967)	cpimedB263
MELO3C034604.2	Wild cucumber (PI 183967)	cpimedB503
MELO3C034604.2	Cucumber (Chinese Long) v2	cumedB081
MELO3C034604.2	Cucumber (Chinese Long) v2	cumedB263
MELO3C034604.2	Cucumber (Chinese Long) v2	cumedB493
MELO3C034604.2	Melon (DHL92) v3.6.1	medmedB041
MELO3C034604.2	Bottle gourd (USVL1VR-Ls)	lsimedB047
MELO3C034604.2	Bottle gourd (USVL1VR-Ls)	lsimedB090
MELO3C034604.2	Bottle gourd (USVL1VR-Ls)	lsimedB448
MELO3C034604.2	Watermelon (Charleston Gray)	medwcgB106
MELO3C034604.2	Watermelon (Charleston Gray)	medwcgB080
MELO3C034604.2	Watermelon (97103) v1	medwmB124
MELO3C034604.2	Watermelon (97103) v1	medwmB130
MELO3C034604.2	Silver-seed gourd	carmedB0111
MELO3C034604.2	Silver-seed gourd	carmedB0314
MELO3C034604.2	Silver-seed gourd	carmedB0329
MELO3C034604.2	Cucumber (Chinese Long) v3	cucmedB089
MELO3C034604.2	Cucumber (Chinese Long) v3	cucmedB518