MELO3C034568.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C034568.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPolygalacturonase
Locationchr11 : 1495209 .. 1495651 (-)
Sequence length354
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCTCAGCTAGGAATTTAATCCAAAAAAAAAAATAGAAAGAGGAAAAAAATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGTATGAGTACTTGCATTAGTTGGATGAGCGATTTTAATTTATACAAATTAAAACATTTTAGTTATGAAATGAAATGATTTAATTTACAGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

mRNA sequence

ATTCCTCAGCTAGGAATTTAATCCAAAAAAAAAAATAGAAAGAGGAAAAAAATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

Coding sequence (CDS)

ATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

Protein sequence

MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Homology
[Close]
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match: XP_008449696.2 (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-40
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL VLLLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 12  MGLISNFVALLPVLLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 71

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA  D KG
Sbjct: 72  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASVDVKG 112

[Close]
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match: XP_008441641.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL SNFVALL + LLLVSNSKAQSSG VFD+T +GAKP+AD+T AL SAWKE CAS TP
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKS+IELQIEGTLQAP+DPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKG 101

[Close]
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match: XP_008449697.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL  +LLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 24  MGLISNFVALLP-MLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 83

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA +D KG
Sbjct: 84  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASSDVKG 123

[Close]
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match: XP_011657634.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 8.0e-36
Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGG---------------VFDITKYGAKPNADVTA 60
           MGLISN VA+L +LLLLVSNSKAQ +                  FDITKYGAKPNAD+TA
Sbjct: 1   MGLISNIVAILPLLLLLVSNSKAQPAAAXXXXXXXXXXXXXXXXFDITKYGAKPNADITA 60

Query: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEG 116

[Close]
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match: XP_011652893.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSS--GGVFDITKYGAKPNADVTAALASAWKEACAST 60
           MGL SNFV LL + LLLVSN+K QS+  GGVFD+T +GAKPN D+T  L  AWK+ACAST
Sbjct: 1   MGLRSNFVTLLPLFLLLVSNAKGQSAAGGGVFDVTSFGAKPNGDITGPLLVAWKDACAST 60

Query: 61  TPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           TPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQA  DPKG
Sbjct: 61  TPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQASPDPKG 103

[Close]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 9.9e-12
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACAST 60
           + + S F AL    L +V  S+      VF++ +YG++P+   D   A  S WK AC   
Sbjct: 2   VSIASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRI 61

Query: 61  T-PSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPK 101
           +  SK+ +PKG++ L      GPCK+ IE  I+GTL APA+P+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPR 104

[Close]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACAST 60
           + + S F AL    L +   S+      VF++ +YG++P+   D   A  S WK AC   
Sbjct: 2   VSIASTFKALCLSFLFIAVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKRACTRI 61

Query: 61  T-PSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPK 101
           +  SK+ +PKG++ L      GPCK+ IE  I+GTL APA+P+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPR 104

[Close]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0 

Query: 9   ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTT-PSKVLI 68
           AL   LLL+V  S++     VF++ ++G+KP+   D T A  S W  AC   +  SK+ +
Sbjct: 10  ALCLSLLLIVVASRSTIRPKVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYV 69

Query: 69  PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           PKG++ L      GPCK+ IE  I+GTL APA+P
Sbjct: 70  PKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANP 103

[Close]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 4.9e-11
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 9  ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTTPSKVLIP 68
          +LL  LL  +  S   S+  VF++  +GAKP+   D T A   AW+ AC S + + V++P
Sbjct: 9  SLLFTLLTFIDVS--ISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVP 68

Query: 69 KGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          KG++ L      GPCKS I  Q+ GT+ AP D
Sbjct: 69 KGTFLLKVITFGGPCKSKITFQVAGTVIAPED 98

[Close]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 11  LSVLLLLVSNSKAQSSGGVFDITKYGAKPNA--DVTAALASAWKEACASTTPSKVLIPKG 70
           L +LL+ V+ S+  +   VFD+  YGAK +   D T A  +AWK+AC    PSK+ IP G
Sbjct: 14  LLLLLIAVTTSRPITRPKVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLG 73

Query: 71  SYGLSQSNLKGPCKSAIELQIEGTLQAP 97
           ++ L      GPC   I   I+GTL AP
Sbjct: 74  TFYLGGVTFVGPCDGKISFVIDGTLLAP 101

[Close]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match: sp|Q40312|PGLR_MEDSA (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-21
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0 

Query: 9   ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKG 68
           A++   L +     AQS  GV DI+K+G KPN+D+  AL SAW EACASTT +K++IP G
Sbjct: 6   AIIVSFLFIADFCAAQS--GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAG 65

Query: 69  SYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           +Y L+   LKGPCK+ IELQ++GT+QAPADP
Sbjct: 66  TYQLNGIELKGPCKAPIELQVDGTIQAPADP 94

[Close]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match: sp|Q05967|PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-21
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0 

Query: 14  LLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLS 73
           L+LL      +S  GVFDITKYGA  NAD++ AL +A+KEAC ST+PS ++IPKG++ ++
Sbjct: 11  LVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMN 70

Query: 74  QSNLKGPCKSAIELQIEGTLQAPADP 100
           Q  L+GPCKS +ELQI+ TL+AP+DP
Sbjct: 71  QVKLEGPCKSPLELQIQATLKAPSDP 96

[Close]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match: sp|Q39786|PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0 

Query: 6   NFVALLSVLLLL-VSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPS 65
           N V  + VLLLL +S SK QS    FD + K+GAK +   D++     AWKEACAS TPS
Sbjct: 6   NIVPSMFVLLLLFISASKVQSD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            V+IPKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18
Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 0 

Query: 6   NFVALLSVLLLL-VSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPS 65
           N V  + VLLLL +S SK Q     FD + K+GAK +   D++     AWKEACAS TPS
Sbjct: 6   NIVPSMFVLLLLFISASKVQPD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            V+IPKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match: sp|W8P8Q3|SALK6_KALTU (Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 PE=1 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 0 

Query: 6  NFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLI 65
          N   L+++  L VS +++Q   G  DITK+GAKPNAD T+AL +AWKEACA+  P+K+++
Sbjct: 5  NLPLLVALFYLFVSVARSQ---GPIDITKFGAKPNADATSALLAAWKEACAAAAPAKIVV 64

Query: 66 PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          P G + L+   L+GPCK+ + ++I G  +APAD
Sbjct: 65 PAGEFLLNAVKLQGPCKAPLTIEIAGNFKAPAD 94

[Close]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match: tr|A0A1S3BML3|A0A1S3BML3_CUCME (LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491497 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-40
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL VLLLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 12  MGLISNFVALLPVLLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 71

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA  D KG
Sbjct: 72  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASVDVKG 112

[Close]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match: tr|A0A1S3B3X5|A0A1S3B3X5_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL SNFVALL + LLLVSNSKAQSSG VFD+T +GAKP+AD+T AL SAWKE CAS TP
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKS+IELQIEGTLQAP+DPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKG 101

[Close]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match: tr|A0A1S3BN96|A0A1S3BN96_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL  +LLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 24  MGLISNFVALLP-MLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 83

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA +D KG
Sbjct: 84  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASSDVKG 123

[Close]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match: tr|E3VSV7|E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo OX=3663 GN=PG1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-29
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL+S F+AL+ +LLLLVSN+   ++ GVFDIT +GAKPNAD T ALA AWKEACAS TP
Sbjct: 11  MGLLSKFMALIPLLLLLVSNATVGATSGVFDITTFGAKPNADATQALADAWKEACASATP 70

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQA-PADPKG 102
           SKVL+PKG+Y L +S LKGPCKS IEL +EGTLQA P D +G
Sbjct: 71  SKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG 112

[Close]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match: tr|A0A1S4E3K9|A0A1S4E3K9_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-23
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0 

Query: 8   VALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPK 67
           +ALL  LLLL   S  Q    +FD+T YGAKPN D+T ALA+AW EACASTTPS +LIPK
Sbjct: 4   LALLPFLLLLSLASTIQGQ-SIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPK 63

Query: 68  GSYGLSQSNLKGPCKSA-IELQIEGTLQAPADPKG 102
           G Y LSQSNLKGPCKS  I++Q+EGTLQAP   KG
Sbjct: 64  GVYQLSQSNLKGPCKSVPIQVQVEGTLQAPIHTKG 97

The following BLAST results are available for this feature:
BLAST of MELO3C034568.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449696.23.2e-4088.12PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo][more]
XP_008441641.12.3e-3884.16PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
XP_008449697.22.3e-3886.14PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
XP_011657634.18.0e-3675.00PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
XP_011652893.13.4e-3477.67PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
BLAST of MELO3C034568.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G43090.19.9e-1237.86Pectin lyase-like superfamily protein[more]
AT1G43080.12.9e-1136.89Pectin lyase-like superfamily protein[more]
AT2G26620.12.9e-1141.49Pectin lyase-like superfamily protein[more]
AT1G05660.14.9e-1140.22Pectin lyase-like superfamily protein[more]
AT1G17150.16.4e-1142.05Pectin lyase-like superfamily protein[more]
BLAST of MELO3C034568.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40312|PGLR_MEDSA2.9e-2156.04Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1[more]
sp|Q05967|PGLR_TOBAC6.5e-2156.98Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1[more]
sp|Q39786|PGLR_GOSHI1.4e-1855.10Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1[more]
sp|Q39766|PGLR_GOSBA5.2e-1854.08Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1[more]
sp|W8P8Q3|SALK6_KALTU5.2e-1847.31Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 P... [more]
BLAST of MELO3C034568.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BML3|A0A1S3BML3_CUCME2.1e-4088.12LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3B3X5|A0A1S3B3X5_CUCME1.5e-3884.16exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1[more]
tr|A0A1S3BN96|A0A1S3BN96_CUCME1.5e-3886.14exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1[more]
tr|E3VSV7|E3VSV7_CUCPE3.7e-2968.63Polygalacturonase OS=Cucurbita pepo OX=3663 GN=PG1 PE=2 SV=1[more]
tr|A0A1S4E3K9|A0A1S4E3K9_CUCME6.7e-2366.32exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008152 metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034568.2MELO3C034568.2gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034568.2.1.five_prime_UTR.1MELO3C034568.2.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034568.2.1.exon.2MELO3C034568.2.1.exon.2exon
MELO3C034568.2.1.exon.1MELO3C034568.2.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034568.2.1.CDS.2MELO3C034568.2.1.CDS.2CDS
MELO3C034568.2.1.CDS.1MELO3C034568.2.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034568.2.1MELO3C034568.2.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 15..101
e-value: 1.3E-16
score: 62.5
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 55..96
e-value: 3.0E-5
score: 23.1
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 10..100
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 10..100
IPR011050Pectin lyase fold/virulence factorSUPERFAMILYSSF51126Pectin lyase-likecoord: 15..100