MELO3C034568.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034568.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPolygalacturonase
Locationchr11 : 1495209 .. 1495651 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCTCAGCTAGGAATTTAATCCAAAAAAAAAAATAGAAAGAGGAAAAAAATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGTATGAGTACTTGCATTAGTTGGATGAGCGATTTTAATTTATACAAATTAAAACATTTTAGTTATGAAATGAAATGATTTAATTTACAGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

mRNA sequence

ATTCCTCAGCTAGGAATTTAATCCAAAAAAAAAAATAGAAAGAGGAAAAAAATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

Coding sequence (CDS)

ATGGGTTTGATATCAAACTTTGTGGCATTATTATCGGTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAATCTAGTGGTGGTGTTTTTGATATCACAAAATACGGTGCCAAACCTAATGCAGATGTAACTGCGGCTTTGGCAAGTGCATGGAAGGAGGCCTGTGCATCGACCACACCAAGTAAAGTTTTGATTCCCAAAGGAAGTTATGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTGCTATTGAACTACAAATTGAAGGGACATTACAAGCTCCAGCTGACCCAAAAGGA

Protein sequence

MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG
Homology
[Close]
BLAST of MELO3C034568.2 vs. NCBI nr
Match: XP_008449696.2 (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-40
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL VLLLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 12  MGLISNFVALLPVLLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 71

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA  D KG
Sbjct: 72  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASVDVKG 112

[Close]
BLAST of MELO3C034568.2 vs. NCBI nr
Match: XP_008441641.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL SNFVALL + LLLVSNSKAQSSG VFD+T +GAKP+AD+T AL SAWKE CAS TP
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKS+IELQIEGTLQAP+DPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKG 101

[Close]
BLAST of MELO3C034568.2 vs. NCBI nr
Match: XP_008449697.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL  +LLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 24  MGLISNFVALLP-MLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 83

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA +D KG
Sbjct: 84  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASSDVKG 123

[Close]
BLAST of MELO3C034568.2 vs. NCBI nr
Match: XP_011657634.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 8.0e-36
Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGG---------------VFDITKYGAKPNADVTA 60
           MGLISN VA+L +LLLLVSNSKAQ +                  FDITKYGAKPNAD+TA
Sbjct: 1   MGLISNIVAILPLLLLLVSNSKAQPAAAXXXXXXXXXXXXXXXXFDITKYGAKPNADITA 60

Query: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEG 116

[Close]
BLAST of MELO3C034568.2 vs. NCBI nr
Match: XP_011652893.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSS--GGVFDITKYGAKPNADVTAALASAWKEACAST 60
           MGL SNFV LL + LLLVSN+K QS+  GGVFD+T +GAKPN D+T  L  AWK+ACAST
Sbjct: 1   MGLRSNFVTLLPLFLLLVSNAKGQSAAGGGVFDVTSFGAKPNGDITGPLLVAWKDACAST 60

Query: 61  TPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           TPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQA  DPKG
Sbjct: 61  TPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQASPDPKG 103

[Close]
BLAST of MELO3C034568.2 vs. TAIR10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 9.9e-12
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACAST 60
           + + S F AL    L +V  S+      VF++ +YG++P+   D   A  S WK AC   
Sbjct: 2   VSIASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRI 61

Query: 61  T-PSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPK 101
           +  SK+ +PKG++ L      GPCK+ IE  I+GTL APA+P+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPR 104

[Close]
BLAST of MELO3C034568.2 vs. TAIR10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACAST 60
           + + S F AL    L +   S+      VF++ +YG++P+   D   A  S WK AC   
Sbjct: 2   VSIASTFKALCLSFLFIAVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKRACTRI 61

Query: 61  T-PSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPK 101
           +  SK+ +PKG++ L      GPCK+ IE  I+GTL APA+P+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPR 104

[Close]
BLAST of MELO3C034568.2 vs. TAIR10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0 

Query: 9   ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTT-PSKVLI 68
           AL   LLL+V  S++     VF++ ++G+KP+   D T A  S W  AC   +  SK+ +
Sbjct: 10  ALCLSLLLIVVASRSTIRPKVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYV 69

Query: 69  PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           PKG++ L      GPCK+ IE  I+GTL APA+P
Sbjct: 70  PKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANP 103

[Close]
BLAST of MELO3C034568.2 vs. TAIR10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 4.9e-11
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 9  ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPN--ADVTAALASAWKEACASTTPSKVLIP 68
          +LL  LL  +  S   S+  VF++  +GAKP+   D T A   AW+ AC S + + V++P
Sbjct: 9  SLLFTLLTFIDVS--ISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVP 68

Query: 69 KGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          KG++ L      GPCKS I  Q+ GT+ AP D
Sbjct: 69 KGTFLLKVITFGGPCKSKITFQVAGTVIAPED 98

[Close]
BLAST of MELO3C034568.2 vs. TAIR10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 11  LSVLLLLVSNSKAQSSGGVFDITKYGAKPNA--DVTAALASAWKEACASTTPSKVLIPKG 70
           L +LL+ V+ S+  +   VFD+  YGAK +   D T A  +AWK+AC    PSK+ IP G
Sbjct: 14  LLLLLIAVTTSRPITRPKVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLG 73

Query: 71  SYGLSQSNLKGPCKSAIELQIEGTLQAP 97
           ++ L      GPC   I   I+GTL AP
Sbjct: 74  TFYLGGVTFVGPCDGKISFVIDGTLLAP 101

[Close]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match: sp|Q40312|PGLR_MEDSA (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-21
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 0 

Query: 9   ALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKG 68
           A++   L +     AQS  GV DI+K+G KPN+D+  AL SAW EACASTT +K++IP G
Sbjct: 6   AIIVSFLFIADFCAAQS--GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAG 65

Query: 69  SYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
           +Y L+   LKGPCK+ IELQ++GT+QAPADP
Sbjct: 66  TYQLNGIELKGPCKAPIELQVDGTIQAPADP 94

[Close]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match: sp|Q05967|PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-21
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0 

Query: 14  LLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPKGSYGLS 73
           L+LL      +S  GVFDITKYGA  NAD++ AL +A+KEAC ST+PS ++IPKG++ ++
Sbjct: 11  LVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMN 70

Query: 74  QSNLKGPCKSAIELQIEGTLQAPADP 100
           Q  L+GPCKS +ELQI+ TL+AP+DP
Sbjct: 71  QVKLEGPCKSPLELQIQATLKAPSDP 96

[Close]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match: sp|Q39786|PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0 

Query: 6   NFVALLSVLLLL-VSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPS 65
           N V  + VLLLL +S SK QS    FD + K+GAK +   D++     AWKEACAS TPS
Sbjct: 6   NIVPSMFVLLLLFISASKVQSD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            V+IPKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18
Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 0 

Query: 6   NFVALLSVLLLL-VSNSKAQSSGGVFD-ITKYGAKPN--ADVTAALASAWKEACASTTPS 65
           N V  + VLLLL +S SK Q     FD + K+GAK +   D++     AWKEACAS TPS
Sbjct: 6   NIVPSMFVLLLLFISASKVQPD--AFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADP 100
            V+IPKG+Y LS+ NL+GPCK+ IE+ ++GT+QAPADP
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

[Close]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match: sp|W8P8Q3|SALK6_KALTU (Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 PE=1 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 0 

Query: 6  NFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLI 65
          N   L+++  L VS +++Q   G  DITK+GAKPNAD T+AL +AWKEACA+  P+K+++
Sbjct: 5  NLPLLVALFYLFVSVARSQ---GPIDITKFGAKPNADATSALLAAWKEACAAAAPAKIVV 64

Query: 66 PKGSYGLSQSNLKGPCKSAIELQIEGTLQAPAD 99
          P G + L+   L+GPCK+ + ++I G  +APAD
Sbjct: 65 PAGEFLLNAVKLQGPCKAPLTIEIAGNFKAPAD 94

[Close]
BLAST of MELO3C034568.2 vs. TrEMBL
Match: tr|A0A1S3BML3|A0A1S3BML3_CUCME (LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491497 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-40
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL VLLLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 12  MGLISNFVALLPVLLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 71

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA  D KG
Sbjct: 72  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASVDVKG 112

[Close]
BLAST of MELO3C034568.2 vs. TrEMBL
Match: tr|A0A1S3B3X5|A0A1S3B3X5_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL SNFVALL + LLLVSNSKAQSSG VFD+T +GAKP+AD+T AL SAWKE CAS TP
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKGSYGLSQSNLKGPCKS+IELQIEGTLQAP+DPKG
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKG 101

[Close]
BLAST of MELO3C034568.2 vs. TrEMBL
Match: tr|A0A1S3BN96|A0A1S3BN96_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGLISNFVALL  +LLLVSNSKAQS+ GVFDITKYGAKPNAD+TAALASAWKEACASTTP
Sbjct: 24  MGLISNFVALLP-MLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTP 83

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKG 102
           SKVLIPKG+YGL+QSNLKGPCKS+IELQ+EGT+QA +D KG
Sbjct: 84  SKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASSDVKG 123

[Close]
BLAST of MELO3C034568.2 vs. TrEMBL
Match: tr|E3VSV7|E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo OX=3663 GN=PG1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-29
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 0 

Query: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60
           MGL+S F+AL+ +LLLLVSN+   ++ GVFDIT +GAKPNAD T ALA AWKEACAS TP
Sbjct: 11  MGLLSKFMALIPLLLLLVSNATVGATSGVFDITTFGAKPNADATQALADAWKEACASATP 70

Query: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQA-PADPKG 102
           SKVL+PKG+Y L +S LKGPCKS IEL +EGTLQA P D +G
Sbjct: 71  SKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG 112

[Close]
BLAST of MELO3C034568.2 vs. TrEMBL
Match: tr|A0A1S4E3K9|A0A1S4E3K9_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-23
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0 

Query: 8   VALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTPSKVLIPK 67
           +ALL  LLLL   S  Q    +FD+T YGAKPN D+T ALA+AW EACASTTPS +LIPK
Sbjct: 4   LALLPFLLLLSLASTIQGQ-SIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPK 63

Query: 68  GSYGLSQSNLKGPCKSA-IELQIEGTLQAPADPKG 102
           G Y LSQSNLKGPCKS  I++Q+EGTLQAP   KG
Sbjct: 64  GVYQLSQSNLKGPCKSVPIQVQVEGTLQAPIHTKG 97

The following BLAST results are available for this feature:
BLAST of MELO3C034568.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449696.23.2e-4088.12PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo][more]
XP_008441641.12.3e-3884.16PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
XP_008449697.22.3e-3886.14PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
XP_011657634.18.0e-3675.00PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
XP_011652893.13.4e-3477.67PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
BLAST of MELO3C034568.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G43090.19.9e-1237.86Pectin lyase-like superfamily protein[more]
AT1G43080.12.9e-1136.89Pectin lyase-like superfamily protein[more]
AT2G26620.12.9e-1141.49Pectin lyase-like superfamily protein[more]
AT1G05660.14.9e-1140.22Pectin lyase-like superfamily protein[more]
AT1G17150.16.4e-1142.05Pectin lyase-like superfamily protein[more]
BLAST of MELO3C034568.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40312|PGLR_MEDSA2.9e-2156.04Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1[more]
sp|Q05967|PGLR_TOBAC6.5e-2156.98Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1[more]
sp|Q39786|PGLR_GOSHI1.4e-1855.10Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1[more]
sp|Q39766|PGLR_GOSBA5.2e-1854.08Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1[more]
sp|W8P8Q3|SALK6_KALTU5.2e-1847.31Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 P... [more]
BLAST of MELO3C034568.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BML3|A0A1S3BML3_CUCME2.1e-4088.12LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3B3X5|A0A1S3B3X5_CUCME1.5e-3884.16exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1[more]
tr|A0A1S3BN96|A0A1S3BN96_CUCME1.5e-3886.14exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1[more]
tr|E3VSV7|E3VSV7_CUCPE3.7e-2968.63Polygalacturonase OS=Cucurbita pepo OX=3663 GN=PG1 PE=2 SV=1[more]
tr|A0A1S4E3K9|A0A1S4E3K9_CUCME6.7e-2366.32exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008152 metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034568.2.1MELO3C034568.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 15..101
e-value: 1.3E-16
score: 62.5
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 55..96
e-value: 3.0E-5
score: 23.1
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 10..100
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 10..100
IPR011050Pectin lyase fold/virulence factorSUPERFAMILYSSF51126Pectin lyase-likecoord: 15..100

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034568.2Cucumber (Gy14) v2cgybmedB074
MELO3C034568.2Cucumber (Gy14) v2cgybmedB449
MELO3C034568.2Cucumber (Gy14) v1cgymedB148
MELO3C034568.2Cucumber (Gy14) v1cgymedB608
MELO3C034568.2Cucurbita maxima (Rimu)cmamedB580
MELO3C034568.2Cucurbita maxima (Rimu)cmamedB628
MELO3C034568.2Cucurbita moschata (Rifu)cmomedB568
MELO3C034568.2Cucurbita moschata (Rifu)cmomedB617
MELO3C034568.2Cucurbita pepo (Zucchini)cpemedB253
MELO3C034568.2Cucurbita pepo (Zucchini)cpemedB293
MELO3C034568.2Wild cucumber (PI 183967)cpimedB081
MELO3C034568.2Cucurbita pepo (Zucchini)cpemedB786
MELO3C034568.2Wild cucumber (PI 183967)cpimedB263
MELO3C034568.2Wild cucumber (PI 183967)cpimedB503
MELO3C034568.2Cucumber (Chinese Long) v2cumedB081
MELO3C034568.2Cucumber (Chinese Long) v2cumedB263
MELO3C034568.2Cucumber (Chinese Long) v2cumedB493
MELO3C034568.2Melon (DHL92) v3.6.1medmedB041
MELO3C034568.2Bottle gourd (USVL1VR-Ls)lsimedB047
MELO3C034568.2Bottle gourd (USVL1VR-Ls)lsimedB090
MELO3C034568.2Bottle gourd (USVL1VR-Ls)lsimedB448
MELO3C034568.2Watermelon (Charleston Gray)medwcgB106
MELO3C034568.2Watermelon (Charleston Gray)medwcgB080
MELO3C034568.2Watermelon (97103) v1medwmB124
MELO3C034568.2Watermelon (97103) v1medwmB130
MELO3C034568.2Silver-seed gourdcarmedB0111
MELO3C034568.2Silver-seed gourdcarmedB0314
MELO3C034568.2Silver-seed gourdcarmedB0329
MELO3C034568.2Cucumber (Chinese Long) v3cucmedB089
MELO3C034568.2Cucumber (Chinese Long) v3cucmedB518
MELO3C034568.2Watermelon (97103) v2medwmbB082
MELO3C034568.2Watermelon (97103) v2medwmbB105
MELO3C034568.2Wax gourdmedwgoB133