MELO3C032701.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACATATTTATATCTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGTTTATTAAATGTTTGTTTTCTATGTCTACAGCCATTATGTTATATCGATGATCAAATTTTATAGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAACATCGCGGGAGGGTCGTCATCTGTGTGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAATTATTTCGTGTTCTTTTTTCTAACTTTATATGTTATTATCGATTAATTAAGCAGGGTCTTCTTCTCAACAAGCGACTCCGACTCCTAGGAGACGTGCGCAGTTTTGACTCTTGGAGTTAGAACGCCACGTTGCAATAAATGGGTGCATTCCGATGACTATCGCCCTTGGAGCAAAGAAGCCTATTTCTTCACACGTCGTTTGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCGTCCGCTATCTTAAGTGGGCAGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACATTTATATATAATTTCATCTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGATTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGTTCGACTGTCACAGACATTTCAAAAAATACAGCGACCCGGAGGAGGCTCGTGCCAACTCACCAAACGCATTGGTTGGACGTGATGAGGATTGA CACATATTTATATCTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGTTTATTAAATGTTTGTTTTCTATGTCTACAGCCATTATGTTATATCGATGATCAAATTTTATAGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAACATCGCGGGAGGGTCGTCATCTGTGTGCGACAATACGGGGTCTTCTTCTCAACAAGCGACTCCGACTCCTAGGAGACGTGCGCAGTTTTGACTCTTGGAGTTAGAACGCCACGTTGCAATAAATGGGTGCATTCCGATGACTATCGCCCTTGGAGCAAAGAAGCCTATTTCTTCACACGTCGTTTGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCGTCCGCTATCTTAAGTGGGCAGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTGTTTGTGATTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGTTCGACTGTCACAGACATTTCAAAAAATACAGCGACCCGGAGGAGGCTCGTGCCAACTCACCAAACGCATTGGTTGGACGTGATGAGGATTGA ATGACTATCGCCCTTGGAGCAAAGAAGCCTATTTCTTCACACGTCGTTTGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCTCGTCCGCTATCTTAAGTGGGCAGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTGTTTGTGATTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGTTCGACTGTCACAGACATTTCAAAAAATACAGCGACCCGGAGGAGGCTCGTGCCAACTCACCAAACGCATTGGTTGGACGTGATGAGGATTGA MTIALGAKKPISSHVVCFSQAIDVCVRKTFLVRYLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNRFVEHQMLTTFKEFRFDCHRHFKKYSDPEEARANSPNALVGRDED
BLAST of MELO3C032701.2.1 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46 Identity = 95/111 (85.59%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35 Identity = 80/111 (72.07%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20 Identity = 54/71 (76.06%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. NCBI nr
Match: XP_011648549.1 (PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus]) HSP 1 Score: 74.3 bits (181), Expect = 2.9e-10 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. NCBI nr
Match: KDO39328.1 (hypothetical protein CISIN_1g041788mg, partial [Citrus sinensis]) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-46 Identity = 95/111 (85.59%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35 Identity = 80/111 (72.07%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20 Identity = 54/71 (76.06%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. TrEMBL
Match: tr|A0A067D926|A0A067D926_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g041788mg PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.2e-06 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of MELO3C032701.2.1 vs. TrEMBL
Match: tr|A0A1S4E4L2|A0A1S4E4L2_CUCME (uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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