MELO3C032046.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C032046.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMLO-like protein 4 isoform X3
Locationchr06 : 15832133 .. 15834860 (-)
Sequence length219
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTTGATCAGAAGGTTCAAATCAAGATGAATTGAAAATTTTATCTGTTATACAATATGTTGTTACTTTGCTTTCTAGGATCATGAATCGTTTGCTTCATATGAAAGTTTAGAGTAGCTCGACTAATATTCGTTCTCGGTATCACCCATGTTTCATATAGCTTCATTGCCATTGCCCTGGTTATGATTAAGGTTGATGTATCTCATAATCAGTCTGCCTTCAAATTCTTCTGTCTTGATCTCCATGGCATCTTGAAGCTTGCCTTTTCTTTTCCCTTTTTGTGTGTGTGTTTAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGGTAAATGAAATTGCACCAAACCATTTTTCTAGTTTCTAAGCTTTGGAACTTGTTTGAGTCATTACAGATGCATTGAAGAAATTGTATTAAATGTAATTTTCACCCAAAATTTTGATAATTTCAACTCAGAAGAATATGCACAAGCACCATCAACTGGACCAGACATAAGGCGACTATAATTATTAGTTTGATGGTTTAATTGATACAATCCCTAAACTTCCAATTGTATTTTTTTCCTCTTTATGAAAAGTAACAAAACTGAGTTGAAATGATGTATACCTATTAAACTCATCCTTTTGTTAAAGGGCACAACCCATTGGATTTTTTAAAGCAATGAAGCGCCCTTTCCTGGGTTTTACTGCTTCGACATTTTCTCCAGTCTTTCAGGAGCATCCAATAAAATTATTCTATGTAGTTGTCATTATCTGAGATTTTCTTTTAAATCTTTTTCCTGCACTCGTCTTCTTGAAAAGATCTAATATTTTTACATCATCTTTTTCCTTTTCAGAAACATGGGGTGAGAACTTTCCAATTAGTGATCCTGACTAGGACCTTGTCATAGCCAGCGATATTTTACTTTGTAAGTTCCTATCCTTTAGTTGTCTCTTTGAGATATTTTTCCAAGATTTAATCAATTCAGTTTCGATGGGAAAAAAGCAAAGTGATTACATAAGAGCAATTGGTTCATGAATTTAATCAACTATGATGGACTGTTTGAGACCATCATAGTGATTCTTAAGCTTCTTTCACGTTATTAAGGATGGTTATGAAGTACGAAAACTTGTGTTACTAGTGCATTTGTTGAGCTTGATGTCAAAGTTTGGACTTCATTTATTCAGCCTTAATGTTCAGTCTTTTGAGTATTACTATTGCACTACTTCTCAAATTCTCTCTTGCACTTGCTATTATCGAACTGATTATTCTTAAGAGGCTTACAAAGATTCATAATCAAGTCAACCACTATCACTGTATCATGTTAGTGAGAACTCAAAACTATTTTGTTCATTATTGGTTTTTAACATGATTTTAACTTGTTGTTTGTAATTTGTTACTAGCTTGAGCTAATAAACTAAGGAGAACTATTGGTTTTAGTTGATTTAGGATAATATTATCAACTAAGTAAAACAATGCATTTCGATCTACTATTTCAATTAATTTAGTTTATTCTCAAGTTGTTCTCTTATTTGTAGTCTATAATTACTAGACTTTACTGATTATGTTGATAGAAAGTTATATTGGTTTTTGTAGTCAATATATATATATTGTTCTTTTTGTTTTCACTACTTCCGGGTGGTGGTTAGAAAGTAGCAATATCTGGGAGAATCCATCTCTAAGTGTGCTAATTTGGTATTATTCTAAAATATGTGAGAACATTTCTAAAATGTTAATTGTCTACATTATCCACAATTTGCCTTCTAATCTCAAGGGAAGATGGATGTATTTCTGTGTTGTGATGCCTTTAAGGCAGAGGCAACTTGCATCAATCTTACTTTGAGGCATAATATAGTTGACTGATTTTAAAATTAATACTTGATTGTTGTAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGGTATGTATTTTTCTTGTCTATTGTGTAAATTTCAATTACGAGGAAGATGTATTTTTTTGTTCTGACATCAATTTGGAGAGAGTTTCCTTTTTAATTTGTTGTGGCTTGACTGGTAGTTGATTCATTTGTGTATTGTAGAATATTAACAAAGTTGATCATGAAAGAGAGGTATGCCTTTTCTTTCTTTTCTGTATTGTAGAATATTAACTTGCATTCCTTGGATTTGGCTTTAGAATGCTCTTATTTCTTAGTAAGCTTGGACCGTCTACATATCTTTTTTGCTAGCTTCCGATAACAGTGGTTGTACTTTCAATATCTTACTACATGTTGAATCATCATCAAATGTAAAGGTTTGAGTTATTAAGGTTATTTAATATTTTCAATATATATCTCGATATCTTTGGTAGAAGCTTATATTGCAGTCCTACTACTTAAAGTTGTTATTTTTCTGGTTATTTTTGTTGCAAATATAGGAACTACATACTCATTCTTGTCATCCTCGTTGTTATTGGTTTATGATTAATTAGGACTAATGACTATTGCTTTGTGGATATTTATGTCATTTCATTTATCTTTATACTAAGCTTTGGTTGTTATTGGTTTTTGAATAAAATATGTTTGATTGTTACTTTGTTCGTTGTGGGTGTTTGCGCTATTTCCTGTCTTTATAATAAGTCTTATTCTGAGTTACAATCATCATTCTCTTTTCTTACTAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

mRNA sequence

ATGATGCTTGATCAGAAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGAATATTAACAAAGTTGATCATGAAAGAGAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

Coding sequence (CDS)

ATGATGCTTGATCAGAAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGAATATTAACAAAGTTGATCATGAAAGAGAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

Protein sequence

MMLDQKVYGWRTWENEAKALAIRNTQEMSFILFKWLYLGSGRPLVLNINKVDHEREVLQESIEVVNIFAAID
Homology
[Close]
BLAST of MELO3C032046.2.1 vs. NCBI nr
Match: XP_008448543.1 (PREDICTED: MLO-like protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. NCBI nr
Match: XP_008448545.1 (PREDICTED: MLO-like protein 4 isoform X3 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. NCBI nr
Match: XP_008448546.1 (PREDICTED: MLO-like protein 4 isoform X4 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. NCBI nr
Match: XP_008448544.1 (PREDICTED: MLO-like protein 4 isoform X2 [Cucumis melo])

HSP 1 Score: 52.0 bits (123), Expect = 9.9e-04
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQE 28
           K+YGWRTWENEAKALAIRNTQE
Sbjct: 171 KIYGWRTWENEAKALAIRNTQE 192

[Close]
BLAST of MELO3C032046.2.1 vs. TrEMBL
Match: tr|A0A1S3BJW6|A0A1S3BJW6_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. TrEMBL
Match: tr|A0A1S3BJB4|A0A1S3BJB4_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. TrEMBL
Match: tr|A0A1S3BKT4|A0A1S3BKT4_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]
BLAST of MELO3C032046.2.1 vs. TrEMBL
Match: tr|A0A1S3BKJ6|A0A1S3BKJ6_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-04
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0 

Query: 6   KVYGWRTWENEAKALAIRNTQE 28
           K+YGWRTWENEAKALAIRNTQE
Sbjct: 171 KIYGWRTWENEAKALAIRNTQE 192

The following BLAST results are available for this feature:
BLAST of MELO3C032046.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448543.15.8e-0491.67PREDICTED: MLO-like protein 4 isoform X1 [Cucumis melo][more]
XP_008448545.15.8e-0491.67PREDICTED: MLO-like protein 4 isoform X3 [Cucumis melo][more]
XP_008448546.15.8e-0491.67PREDICTED: MLO-like protein 4 isoform X4 [Cucumis melo][more]
XP_008448544.19.9e-0495.45PREDICTED: MLO-like protein 4 isoform X2 [Cucumis melo][more]
BLAST of MELO3C032046.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032046.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032046.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BJW6|A0A1S3BJW6_CUCME3.8e-0491.67MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1[more]
tr|A0A1S3BJB4|A0A1S3BJB4_CUCME3.8e-0491.67MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1[more]
tr|A0A1S3BKT4|A0A1S3BKT4_CUCME3.8e-0491.67MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1[more]
tr|A0A1S3BKJ6|A0A1S3BKJ6_CUCME6.5e-0495.45MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C032046.2MELO3C032046.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C032046.2.1MELO3C032046.2.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032046.2.1.exon.5MELO3C032046.2.1.exon.5exon
MELO3C032046.2.1.exon.4MELO3C032046.2.1.exon.4exon
MELO3C032046.2.1.exon.3MELO3C032046.2.1.exon.3exon
MELO3C032046.2.1.exon.2MELO3C032046.2.1.exon.2exon
MELO3C032046.2.1.exon.1MELO3C032046.2.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032046.2.1.CDS.5MELO3C032046.2.1.CDS.5CDS
MELO3C032046.2.1.CDS.4MELO3C032046.2.1.CDS.4CDS
MELO3C032046.2.1.CDS.3MELO3C032046.2.1.CDS.3CDS
MELO3C032046.2.1.CDS.2MELO3C032046.2.1.CDS.2CDS
MELO3C032046.2.1.CDS.1MELO3C032046.2.1.CDS.1CDS