MELO3C032046.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032046.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	MLO-like protein 4 isoform X3
Location	chr06 : 15832133 .. 15834860 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTGATCAGAAGGTTCAAATCAAGATGAATTGAAAATTTTATCTGTTATACAATATGTTGTTACTTTGCTTTCTAGGATCATGAATCGTTTGCTTCATATGAAAGTTTAGAGTAGCTCGACTAATATTCGTTCTCGGTATCACCCATGTTTCATATAGCTTCATTGCCATTGCCCTGGTTATGATTAAGGTTGATGTATCTCATAATCAGTCTGCCTTCAAATTCTTCTGTCTTGATCTCCATGGCATCTTGAAGCTTGCCTTTTCTTTTCCCTTTTTGTGTGTGTGTTTAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGGTAAATGAAATTGCACCAAACCATTTTTCTAGTTTCTAAGCTTTGGAACTTGTTTGAGTCATTACAGATGCATTGAAGAAATTGTATTAAATGTAATTTTCACCCAAAATTTTGATAATTTCAACTCAGAAGAATATGCACAAGCACCATCAACTGGACCAGACATAAGGCGACTATAATTATTAGTTTGATGGTTTAATTGATACAATCCCTAAACTTCCAATTGTATTTTTTTCCTCTTTATGAAAAGTAACAAAACTGAGTTGAAATGATGTATACCTATTAAACTCATCCTTTTGTTAAAGGGCACAACCCATTGGATTTTTTAAAGCAATGAAGCGCCCTTTCCTGGGTTTTACTGCTTCGACATTTTCTCCAGTCTTTCAGGAGCATCCAATAAAATTATTCTATGTAGTTGTCATTATCTGAGATTTTCTTTTAAATCTTTTTCCTGCACTCGTCTTCTTGAAAAGATCTAATATTTTTACATCATCTTTTTCCTTTTCAGAAACATGGGGTGAGAACTTTCCAATTAGTGATCCTGACTAGGACCTTGTCATAGCCAGCGATATTTTACTTTGTAAGTTCCTATCCTTTAGTTGTCTCTTTGAGATATTTTTCCAAGATTTAATCAATTCAGTTTCGATGGGAAAAAAGCAAAGTGATTACATAAGAGCAATTGGTTCATGAATTTAATCAACTATGATGGACTGTTTGAGACCATCATAGTGATTCTTAAGCTTCTTTCACGTTATTAAGGATGGTTATGAAGTACGAAAACTTGTGTTACTAGTGCATTTGTTGAGCTTGATGTCAAAGTTTGGACTTCATTTATTCAGCCTTAATGTTCAGTCTTTTGAGTATTACTATTGCACTACTTCTCAAATTCTCTCTTGCACTTGCTATTATCGAACTGATTATTCTTAAGAGGCTTACAAAGATTCATAATCAAGTCAACCACTATCACTGTATCATGTTAGTGAGAACTCAAAACTATTTTGTTCATTATTGGTTTTTAACATGATTTTAACTTGTTGTTTGTAATTTGTTACTAGCTTGAGCTAATAAACTAAGGAGAACTATTGGTTTTAGTTGATTTAGGATAATATTATCAACTAAGTAAAACAATGCATTTCGATCTACTATTTCAATTAATTTAGTTTATTCTCAAGTTGTTCTCTTATTTGTAGTCTATAATTACTAGACTTTACTGATTATGTTGATAGAAAGTTATATTGGTTTTTGTAGTCAATATATATATATTGTTCTTTTTGTTTTCACTACTTCCGGGTGGTGGTTAGAAAGTAGCAATATCTGGGAGAATCCATCTCTAAGTGTGCTAATTTGGTATTATTCTAAAATATGTGAGAACATTTCTAAAATGTTAATTGTCTACATTATCCACAATTTGCCTTCTAATCTCAAGGGAAGATGGATGTATTTCTGTGTTGTGATGCCTTTAAGGCAGAGGCAACTTGCATCAATCTTACTTTGAGGCATAATATAGTTGACTGATTTTAAAATTAATACTTGATTGTTGTAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGGTATGTATTTTTCTTGTCTATTGTGTAAATTTCAATTACGAGGAAGATGTATTTTTTTGTTCTGACATCAATTTGGAGAGAGTTTCCTTTTTAATTTGTTGTGGCTTGACTGGTAGTTGATTCATTTGTGTATTGTAGAATATTAACAAAGTTGATCATGAAAGAGAGGTATGCCTTTTCTTTCTTTTCTGTATTGTAGAATATTAACTTGCATTCCTTGGATTTGGCTTTAGAATGCTCTTATTTCTTAGTAAGCTTGGACCGTCTACATATCTTTTTTGCTAGCTTCCGATAACAGTGGTTGTACTTTCAATATCTTACTACATGTTGAATCATCATCAAATGTAAAGGTTTGAGTTATTAAGGTTATTTAATATTTTCAATATATATCTCGATATCTTTGGTAGAAGCTTATATTGCAGTCCTACTACTTAAAGTTGTTATTTTTCTGGTTATTTTTGTTGCAAATATAGGAACTACATACTCATTCTTGTCATCCTCGTTGTTATTGGTTTATGATTAATTAGGACTAATGACTATTGCTTTGTGGATATTTATGTCATTTCATTTATCTTTATACTAAGCTTTGGTTGTTATTGGTTTTTGAATAAAATATGTTTGATTGTTACTTTGTTCGTTGTGGGTGTTTGCGCTATTTCCTGTCTTTATAATAAGTCTTATTCTGAGTTACAATCATCATTCTCTTTTCTTACTAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

mRNA sequence

ATGATGCTTGATCAGAAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGAATATTAACAAAGTTGATCATGAAAGAGAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

Coding sequence (CDS)

ATGATGCTTGATCAGAAGGTATATGGCTGGAGAACGTGGGAAAATGAGGCTAAGGCTTTAGCCATTCGAAACACTCAAGAAATGTCCTTCATATTGTTCAAGTGGTTGTATCTTGGGAGTGGACGTCCATTGGTTTTGAATATTAACAAAGTTGATCATGAAAGAGAGGTTTTGCAAGAATCCATTGAAGTAGTTAACATATTTGCGGCAATTGATTGA

Protein sequence

MMLDQKVYGWRTWENEAKALAIRNTQEMSFILFKWLYLGSGRPLVLNINKVDHEREVLQESIEVVNIFAAID

Homology

[Close]

BLAST of MELO3C032046.2 vs. NCBI nr
Match: XP_008448543.1 (PREDICTED: MLO-like protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. NCBI nr
Match: XP_008448545.1 (PREDICTED: MLO-like protein 4 isoform X3 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. NCBI nr
Match: XP_008448546.1 (PREDICTED: MLO-like protein 4 isoform X4 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. NCBI nr
Match: XP_008448544.1 (PREDICTED: MLO-like protein 4 isoform X2 [Cucumis melo])

HSP 1 Score: 52.0 bits (123), Expect = 9.9e-04
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQE 28
           K+YGWRTWENEAKALAIRNTQE
Sbjct: 171 KIYGWRTWENEAKALAIRNTQE 192

[Close]

BLAST of MELO3C032046.2 vs. TrEMBL
Match: tr|A0A1S3BJW6|A0A1S3BJW6_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. TrEMBL
Match: tr|A0A1S3BJB4|A0A1S3BJB4_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. TrEMBL
Match: tr|A0A1S3BKT4|A0A1S3BKT4_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQEMS 30
           K+YGWRTWENEAKALAIRNTQE S
Sbjct: 171 KIYGWRTWENEAKALAIRNTQEES 194

[Close]

BLAST of MELO3C032046.2 vs. TrEMBL
Match: tr|A0A1S3BKJ6|A0A1S3BKJ6_CUCME (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-04
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 6   KVYGWRTWENEAKALAIRNTQE 28
           K+YGWRTWENEAKALAIRNTQE
Sbjct: 171 KIYGWRTWENEAKALAIRNTQE 192

The following BLAST results are available for this feature:

BLAST of MELO3C032046.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448543.1	5.8e-04	91.67	PREDICTED: MLO-like protein 4 isoform X1 [Cucumis melo]	[more]
XP_008448545.1	5.8e-04	91.67	PREDICTED: MLO-like protein 4 isoform X3 [Cucumis melo]	[more]
XP_008448546.1	5.8e-04	91.67	PREDICTED: MLO-like protein 4 isoform X4 [Cucumis melo]	[more]
XP_008448544.1	9.9e-04	95.45	PREDICTED: MLO-like protein 4 isoform X2 [Cucumis melo]	[more]

BLAST of MELO3C032046.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C032046.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032046.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJW6\|A0A1S3BJW6_CUCME	3.8e-04	91.67	MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1	[more]
tr\|A0A1S3BJB4\|A0A1S3BJB4_CUCME	3.8e-04	91.67	MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1	[more]
tr\|A0A1S3BKT4\|A0A1S3BKT4_CUCME	3.8e-04	91.67	MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1	[more]
tr\|A0A1S3BKJ6\|A0A1S3BKJ6_CUCME	6.5e-04	95.45	MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103490688 PE=3 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032046.2.1	MELO3C032046.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032046.2	Cucumber (Gy14) v2	cgybmedB216
MELO3C032046.2	Cucumber (Gy14) v1	cgymedB606
MELO3C032046.2	Cucurbita maxima (Rimu)	cmamedB274
MELO3C032046.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C032046.2	Cucurbita moschata (Rifu)	cmomedB261
MELO3C032046.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C032046.2	Cucurbita pepo (Zucchini)	cpemedB630
MELO3C032046.2	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C032046.2	Wild cucumber (PI 183967)	cpimedB240
MELO3C032046.2	Cucumber (Chinese Long) v2	cumedB239
MELO3C032046.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032046.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C032046.2	Watermelon (97103) v1	medwmB448
MELO3C032046.2	Silver-seed gourd	carmedB0521
MELO3C032046.2	Silver-seed gourd	carmedB0771
MELO3C032046.2	Cucumber (Chinese Long) v3	cucmedB247
MELO3C032046.2	Watermelon (97103) v2	medwmbB424
MELO3C032046.2	Wax gourd	medwgoB546