MELO3C031929.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C031929.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 10917464 .. 10920553 (+)
Sequence length447
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGGTAAGTAGGCTTGAACACATAGAAGAGATGTGCAAGATAATTGGCACAAAGAATCCCTTCCATTGGAATCTAATTTTTAGAAGAAAGCTTGAAGATATAAACTCTCTTATTTTCTTTATTTCTTGCCAAAAATCTCCATCTAAAGACAAGAATACGAAGTGTGGATAGCAACAGTATCATTCGTTGGAAATCTCTCCATCTGGCCAATTTTCTCAATCTCTGTCATTCCTGAACACATGAGAATGCATCAGAATTTCCAGTTTCTCCCGATGGACATATCCTTAGCAAAGAGCATTGGAGAACACAAATAATATTTTACTTCATTGAAAATTTGCAATTTCTCTATAGGGCAACTTTCTTTATAAATTCAACATCTCTTGTATGATACTTCTCTCCTCTCTCTTGTATGGTACTTCTCTCCTCTAGCCTAAGTGTGATGTAATTTTAAAATTTTGGGTTAACTTATTATGTGTCTTGAACAATTGATGAGACCTAGTTGTGCTTCTTTCGATTTAAGTGCTTGTTTCATACATATATTGATATATAAAGTCCAAGACCTAAATGTGCTTTGACAAGTTTATTGTATTCATGGATTTGACTTGATTTGGTTCTTGCAGGAAAGGTCATAGCATCGTGCTGTTATTGAACGTTTCACTTTTTAGAACATAATGTTCCAATGTTTTAGTTTACGTTGGGTACTGGGTAGCTCTATTATGTTAATCTAATTGTCTTTTTTCTTTTGTGTTTGTTGTTTATGAGGTGAGTTTTGTCCGACTGCAAAATAATCTAATGAAAAACGCTATCAAATGTTTTTATAGCAATGTATATAAGTTATATCTTCATACTCTACGATAGCACTCATTATAGTTTCGAAAAAACGCAATAAAAAGCTCAAACTTTTAATTACATGGGTTGTCAGGACTATGGAAAAATGCTATAAAAAGTCTATTATAACCTTTTTCATTAGCTATTGTATATGTTATTTCTTGTAGCGTGGTGTGAATCTATTCCTAGATATGTTACTGATATGCCATTTTTTATTTTGCCATTAGCTGGATAATTAAACCCTATTTGTCTTGCTGTTACTCCCAGGCAGGGAAGTGTAACATGGAGTAACGATGCAGAACGTATATTTTTAGGAGTAGTGATGGGTATGTACATGTACCACCAATTGTTACTTGCAATGAAAATCAATATAATGTACTAATTACTATGAACATGATCTTCTCCAATTTCGTTGCTAAATTATAGTTACTCCATGTTTGTGCATTCCTCACCCTGCTTGCGCTAATTTTGTTGCTAAATTACAGTTACTCTTACTTGTCTTTTGCCAAATGCATAATCAAGATCACTATGGTGAGGATTATTCATAGTCCTCTGCACTAAGGTGAGGATTATTCATTGATCACCATGTTCTTATATCTATTTATTTCTTACAATTTTTTTTGTTTGTTTCCCTTTAGCTTCATTGCCCATATGAATTGAATTTGATAAGGTATGTATTTATGCTGTTGGGTAAGAAATAACCAGATTGTCCCTGACTTTGTTATTGTTTTTTGTTGGTGTACTGTATTGATAAGGATGTGTGCTTCAAACTTGGAGTCTTCATCCAAAGATAAGGTGAGAAGGAAACTTTTGGCCACTACTCATTAGGCTCAAATTTGGATATTTCACATTTAGGTAGCCTTCTACTTCTATATGAGATTGACAAGCTAGAATTATGAAATACCAATCGAAACTGACTTTAATCTAGTGAACTAATTTTGGCATAATATCTGAGATGAAGATTTTTTTTTTCACATTACTCTACTGCTAGAGTATAAACAAATATCTATTGGCCTAGTTCTTTTGTATTATTATATCTCTACTGCGAGAGTATAAACAAATATGATGCAGTTGCTGCTAGTGTTCCTCATGATGAAGGGACACTATTCTTGTATTATTGGGATTTTGATTGATATTATTTTTTGAATGAAATTGATGAGGATAGTTTTGAGTCCAATGATTTTTTTAGAATGATGAGAATATTTTTGGATAAACTTGCTCTTTATGAATGCTATATGATGATAATATTGGCTTATTCTTAAAAAGTGTTACCTAAAAGCTTTTTAAGGATAACTATATGATGATAATATTAACTAGTCTTAAAAAGTTTGGTTTTATCAGAAATCTTAAATTTTGTTTGCCACCTGAATATTTTGTTGTCTTTTGTCAGGGGGTTCTTTCATGGTTACTCGTTTTTTACAGTTCTCATGATCCTAAATCATGCCTTTAGGTATTAAACAATTGCACACTTAGAGTTATTAGCATCAATAGTAGATCTTATCTTAGGTTGACTTTATGGAAGTCTTTGTTATTTAGTCAATTAAGTCTTGTGGGTTTGTGCGATAGTGTGGAAATATACACTATAAAAATAGCACCAAGCCTATTTTCTTAATTTTCTTATATCTAGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTATTGCTTATTACAACTACAAGGCCTTAATTCATTTGATGAATTTATTTGTACCTTTAAGGTCCTACTACTTAAAGTTGTTATATTGCAATCCTACTACAATCATCATCAAATGTATATGTGATGTGTTGTGTATGTGCTGTGTTGTTGAAGTGTGTGATATATGTGCTGTGTTGAGAAGTGAATGTGTTGTGTTGTTGATGCGTAGAGTCATACTCTAAAATTTTTTTTTACTAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAGGTTTAGTAGCAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTTGTATCAAAACATATATGTTCATTGCTTCATTGTACAAACACTTTACCAACAATTGTACAAATATTAGAAAGTGTATGTTAAAGTATATATATTAAAGTGTTCATTGTTTCTTTCCATA

mRNA sequence

ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGCTTCATTGCCCATATGAATTGAATTTGATAAGGGGGTTCTTTCATGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAGGTTTAGTAGCAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTTGTATCAAAACATATATGTTCATTGCTTCATTGTACAAACACTTTACCAACAATTGTACAAATATTAGAAAGTGTATGTTAAAGTATATATATTAAAGTGTTCATTGTTTCTTTCCATA

Coding sequence (CDS)

ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGCTTCATTGCCCATATGAATTGAATTTGATAAGGGGGTTCTTTCATGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAG

Protein sequence

MYHRLNNSTITFYGTGSKYLMSIEALLLHCPYELNLIRGFFHEKYGDNICFSSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTFL
Homology
[Close]
BLAST of MELO3C031929.2.1 vs. NCBI nr
Match: XP_016901772.1 (PREDICTED: uncharacterized protein LOC107991393 isoform X1 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 40/61 (65.57%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 37  IRGFFHEKYGDNICF-----SSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTF 93
           IRGFFH      +        SGI G MMLKYADNIVKVLQ+SFGAMKSYLRQF DV  F
Sbjct: 64  IRGFFHGYSFITVLMILNHALSGIVGSMMLKYADNIVKVLQESFGAMKSYLRQFFDVLAF 123

[Close]
BLAST of MELO3C031929.2.1 vs. TrEMBL
Match: tr|A0A1S4E0K5|A0A1S4E0K5_CUCME (uncharacterized protein LOC107991393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991393 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09
Identity = 40/61 (65.57%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 37  IRGFFHEKYGDNICF-----SSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTF 93
           IRGFFH      +        SGI G MMLKYADNIVKVLQ+SFGAMKSYLRQF DV  F
Sbjct: 64  IRGFFHGYSFITVLMILNHALSGIVGSMMLKYADNIVKVLQESFGAMKSYLRQFFDVLAF 123

The following BLAST results are available for this feature:
BLAST of MELO3C031929.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901772.12.0e-0965.57PREDICTED: uncharacterized protein LOC107991393 isoform X1 [Cucumis melo][more]
BLAST of MELO3C031929.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031929.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031929.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E0K5|A0A1S4E0K5_CUCME1.3e-0965.57uncharacterized protein LOC107991393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C031929.2MELO3C031929.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C031929.2.1MELO3C031929.2.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C031929.2.1.CDS.1MELO3C031929.2.1.CDS.1CDS
MELO3C031929.2.1.CDS.2MELO3C031929.2.1.CDS.2CDS
MELO3C031929.2.1.CDS.3MELO3C031929.2.1.CDS.3CDS
MELO3C031929.2.1.CDS.4MELO3C031929.2.1.CDS.4CDS
MELO3C031929.2.1.CDS.5MELO3C031929.2.1.CDS.5CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C031929.2.1.exon.1MELO3C031929.2.1.exon.1exon
MELO3C031929.2.1.exon.2MELO3C031929.2.1.exon.2exon
MELO3C031929.2.1.exon.3MELO3C031929.2.1.exon.3exon
MELO3C031929.2.1.exon.4MELO3C031929.2.1.exon.4exon
MELO3C031929.2.1.exon.5MELO3C031929.2.1.exon.5exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C031929.2.1.three_prime_UTR.1MELO3C031929.2.1.three_prime_UTR.1three_prime_UTR