MELO3C031929.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C031929.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 10917464 .. 10920553 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGGTAAGTAGGCTTGAACACATAGAAGAGATGTGCAAGATAATTGGCACAAAGAATCCCTTCCATTGGAATCTAATTTTTAGAAGAAAGCTTGAAGATATAAACTCTCTTATTTTCTTTATTTCTTGCCAAAAATCTCCATCTAAAGACAAGAATACGAAGTGTGGATAGCAACAGTATCATTCGTTGGAAATCTCTCCATCTGGCCAATTTTCTCAATCTCTGTCATTCCTGAACACATGAGAATGCATCAGAATTTCCAGTTTCTCCCGATGGACATATCCTTAGCAAAGAGCATTGGAGAACACAAATAATATTTTACTTCATTGAAAATTTGCAATTTCTCTATAGGGCAACTTTCTTTATAAATTCAACATCTCTTGTATGATACTTCTCTCCTCTCTCTTGTATGGTACTTCTCTCCTCTAGCCTAAGTGTGATGTAATTTTAAAATTTTGGGTTAACTTATTATGTGTCTTGAACAATTGATGAGACCTAGTTGTGCTTCTTTCGATTTAAGTGCTTGTTTCATACATATATTGATATATAAAGTCCAAGACCTAAATGTGCTTTGACAAGTTTATTGTATTCATGGATTTGACTTGATTTGGTTCTTGCAGGAAAGGTCATAGCATCGTGCTGTTATTGAACGTTTCACTTTTTAGAACATAATGTTCCAATGTTTTAGTTTACGTTGGGTACTGGGTAGCTCTATTATGTTAATCTAATTGTCTTTTTTCTTTTGTGTTTGTTGTTTATGAGGTGAGTTTTGTCCGACTGCAAAATAATCTAATGAAAAACGCTATCAAATGTTTTTATAGCAATGTATATAAGTTATATCTTCATACTCTACGATAGCACTCATTATAGTTTCGAAAAAACGCAATAAAAAGCTCAAACTTTTAATTACATGGGTTGTCAGGACTATGGAAAAATGCTATAAAAAGTCTATTATAACCTTTTTCATTAGCTATTGTATATGTTATTTCTTGTAGCGTGGTGTGAATCTATTCCTAGATATGTTACTGATATGCCATTTTTTATTTTGCCATTAGCTGGATAATTAAACCCTATTTGTCTTGCTGTTACTCCCAGGCAGGGAAGTGTAACATGGAGTAACGATGCAGAACGTATATTTTTAGGAGTAGTGATGGGTATGTACATGTACCACCAATTGTTACTTGCAATGAAAATCAATATAATGTACTAATTACTATGAACATGATCTTCTCCAATTTCGTTGCTAAATTATAGTTACTCCATGTTTGTGCATTCCTCACCCTGCTTGCGCTAATTTTGTTGCTAAATTACAGTTACTCTTACTTGTCTTTTGCCAAATGCATAATCAAGATCACTATGGTGAGGATTATTCATAGTCCTCTGCACTAAGGTGAGGATTATTCATTGATCACCATGTTCTTATATCTATTTATTTCTTACAATTTTTTTTGTTTGTTTCCCTTTAGCTTCATTGCCCATATGAATTGAATTTGATAAGGTATGTATTTATGCTGTTGGGTAAGAAATAACCAGATTGTCCCTGACTTTGTTATTGTTTTTTGTTGGTGTACTGTATTGATAAGGATGTGTGCTTCAAACTTGGAGTCTTCATCCAAAGATAAGGTGAGAAGGAAACTTTTGGCCACTACTCATTAGGCTCAAATTTGGATATTTCACATTTAGGTAGCCTTCTACTTCTATATGAGATTGACAAGCTAGAATTATGAAATACCAATCGAAACTGACTTTAATCTAGTGAACTAATTTTGGCATAATATCTGAGATGAAGATTTTTTTTTTCACATTACTCTACTGCTAGAGTATAAACAAATATCTATTGGCCTAGTTCTTTTGTATTATTATATCTCTACTGCGAGAGTATAAACAAATATGATGCAGTTGCTGCTAGTGTTCCTCATGATGAAGGGACACTATTCTTGTATTATTGGGATTTTGATTGATATTATTTTTTGAATGAAATTGATGAGGATAGTTTTGAGTCCAATGATTTTTTTAGAATGATGAGAATATTTTTGGATAAACTTGCTCTTTATGAATGCTATATGATGATAATATTGGCTTATTCTTAAAAAGTGTTACCTAAAAGCTTTTTAAGGATAACTATATGATGATAATATTAACTAGTCTTAAAAAGTTTGGTTTTATCAGAAATCTTAAATTTTGTTTGCCACCTGAATATTTTGTTGTCTTTTGTCAGGGGGTTCTTTCATGGTTACTCGTTTTTTACAGTTCTCATGATCCTAAATCATGCCTTTAGGTATTAAACAATTGCACACTTAGAGTTATTAGCATCAATAGTAGATCTTATCTTAGGTTGACTTTATGGAAGTCTTTGTTATTTAGTCAATTAAGTCTTGTGGGTTTGTGCGATAGTGTGGAAATATACACTATAAAAATAGCACCAAGCCTATTTTCTTAATTTTCTTATATCTAGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTATTGCTTATTACAACTACAAGGCCTTAATTCATTTGATGAATTTATTTGTACCTTTAAGGTCCTACTACTTAAAGTTGTTATATTGCAATCCTACTACAATCATCATCAAATGTATATGTGATGTGTTGTGTATGTGCTGTGTTGTTGAAGTGTGTGATATATGTGCTGTGTTGAGAAGTGAATGTGTTGTGTTGTTGATGCGTAGAGTCATACTCTAAAATTTTTTTTTACTAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAGGTTTAGTAGCAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTTGTATCAAAACATATATGTTCATTGCTTCATTGTACAAACACTTTACCAACAATTGTACAAATATTAGAAAGTGTATGTTAAAGTATATATATTAAAGTGTTCATTGTTTCTTTCCATA

mRNA sequence

ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGCTTCATTGCCCATATGAATTGAATTTGATAAGGGGGTTCTTTCATGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAGGTTTAGTAGCAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTTGTATCAAAACATATATGTTCATTGCTTCATTGTACAAACACTTTACCAACAATTGTACAAATATTAGAAAGTGTATGTTAAAGTATATATATTAAAGTGTTCATTGTTTCTTTCCATA

Coding sequence (CDS)

ATGTATCACCGTCTGAATAATTCCACAATAACGTTTTATGGAACTGGATCCAAGTATCTAATGAGTATTGAGGCTCTGTTGCTTCATTGCCCATATGAATTGAATTTGATAAGGGGGTTCTTTCATGAAAAATATGGCGACAACATTTGTTTTTCCAGTGGCATTGCTGGATTTATGATGTTGAAGTATGCAGATAATATTGTGAAGGTTTTGCAAAAATCCTTTGGAGCAATGAAGTCATATTTGCGACAATTCATTGATGTATCGACCTTTTTGTAG

Protein sequence

MYHRLNNSTITFYGTGSKYLMSIEALLLHCPYELNLIRGFFHEKYGDNICFSSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTFL
Homology
[Close]
BLAST of MELO3C031929.2 vs. NCBI nr
Match: XP_016901772.1 (PREDICTED: uncharacterized protein LOC107991393 isoform X1 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 40/61 (65.57%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 37  IRGFFHEKYGDNICF-----SSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTF 93
           IRGFFH      +        SGI G MMLKYADNIVKVLQ+SFGAMKSYLRQF DV  F
Sbjct: 64  IRGFFHGYSFITVLMILNHALSGIVGSMMLKYADNIVKVLQESFGAMKSYLRQFFDVLAF 123

[Close]
BLAST of MELO3C031929.2 vs. TrEMBL
Match: tr|A0A1S4E0K5|A0A1S4E0K5_CUCME (uncharacterized protein LOC107991393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991393 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09
Identity = 40/61 (65.57%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 37  IRGFFHEKYGDNICF-----SSGIAGFMMLKYADNIVKVLQKSFGAMKSYLRQFIDVSTF 93
           IRGFFH      +        SGI G MMLKYADNIVKVLQ+SFGAMKSYLRQF DV  F
Sbjct: 64  IRGFFHGYSFITVLMILNHALSGIVGSMMLKYADNIVKVLQESFGAMKSYLRQFFDVLAF 123

The following BLAST results are available for this feature:
BLAST of MELO3C031929.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901772.12.0e-0965.57PREDICTED: uncharacterized protein LOC107991393 isoform X1 [Cucumis melo][more]
BLAST of MELO3C031929.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C031929.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C031929.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E0K5|A0A1S4E0K5_CUCME1.3e-0965.57uncharacterized protein LOC107991393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031929.2.1MELO3C031929.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031929.2Cucumber (Gy14) v2cgybmedB215
MELO3C031929.2Cucumber (Gy14) v1cgymedB002
MELO3C031929.2Cucurbita maxima (Rimu)cmamedB346
MELO3C031929.2Cucurbita maxima (Rimu)cmamedB777
MELO3C031929.2Cucurbita moschata (Rifu)cmomedB332
MELO3C031929.2Cucurbita moschata (Rifu)cmomedB774
MELO3C031929.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C031929.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C031929.2Wild cucumber (PI 183967)cpimedB239
MELO3C031929.2Cucumber (Chinese Long) v2cumedB238
MELO3C031929.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031929.2Watermelon (Charleston Gray)medwcgB417
MELO3C031929.2Watermelon (97103) v1medwmB448
MELO3C031929.2Silver-seed gourdcarmedB0042
MELO3C031929.2Silver-seed gourdcarmedB0661
MELO3C031929.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031929.2Watermelon (97103) v2medwmbB424
MELO3C031929.2Wax gourdmedwgoB531