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| Name | MELO3C031708.2.1 |
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| Type | mRNA |
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| Organism | Cucumis melo (Melon (DHL92) v3.6.1) |
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| Description | auxin efflux carrier component 2 |
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| Location | chr06 : 12764767 .. 12765113 (+) |
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| Sequence length | 347 |
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The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA mRNA sequence AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA Coding sequence (CDS) AACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA Protein sequence NRGKIQRLKKEQKCETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKNGRESYGRKATVEMRRKAFLKNRKNKYAGKFYRVLQKMVYFFGRKIRKLKGMHNMY
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0009734 |
auxin-activated signaling pathway |
| biological_process |
GO:0010315 |
auxin efflux |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0010329 |
auxin efflux transmembrane transporter activity |
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| MELO3C031708.2.1.five_prime_UTR.1 | MELO3C031708.2.1.five_prime_UTR.1 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| MELO3C031708.2.1.exon.1 | MELO3C031708.2.1.exon.1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| MELO3C031708.2.1.CDS.1 | MELO3C031708.2.1.CDS.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
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| MELO3C031708.2.1 | MELO3C031708.2.1-protein | polypeptide |
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..62 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 32..50 |
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