MELO3C031708.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C031708.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionauxin efflux carrier component 2
Locationchr06 : 12764767 .. 12765113 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA

mRNA sequence

AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA

Coding sequence (CDS)

AACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTTTAAAAAATCGGAAGAACAAATACGCCGGAAAGTTTTACAGAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA

Protein sequence

NRGKIQRLKKEQKCETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKNGRESYGRKATVEMRRKAFLKNRKNKYAGKFYRVLQKMVYFFGRKIRKLKGMHNMY
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0010315 auxin efflux
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0010329 auxin efflux transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031708.2.1MELO3C031708.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..50

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031708.2Cucumber (Gy14) v2cgybmedB215
MELO3C031708.2Cucumber (Gy14) v2cgybmedB492
MELO3C031708.2Cucumber (Gy14) v1cgymedB379
MELO3C031708.2Cucumber (Gy14) v1cgymedB412
MELO3C031708.2Cucurbita maxima (Rimu)cmamedB151
MELO3C031708.2Cucurbita maxima (Rimu)cmamedB346
MELO3C031708.2Cucurbita maxima (Rimu)cmamedB777
MELO3C031708.2Cucurbita moschata (Rifu)cmomedB139
MELO3C031708.2Cucurbita moschata (Rifu)cmomedB332
MELO3C031708.2Cucurbita moschata (Rifu)cmomedB774
MELO3C031708.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C031708.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C031708.2Cucurbita pepo (Zucchini)cpemedB764
MELO3C031708.2Wild cucumber (PI 183967)cpimedB239
MELO3C031708.2Wild cucumber (PI 183967)cpimedB552
MELO3C031708.2Cucumber (Chinese Long) v2cumedB238
MELO3C031708.2Cucumber (Chinese Long) v2cumedB534
MELO3C031708.2Melon (DHL92) v3.6.1medmedB091
MELO3C031708.2Bottle gourd (USVL1VR-Ls)lsimedB280
MELO3C031708.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C031708.2Watermelon (Charleston Gray)medwcgB413
MELO3C031708.2Watermelon (Charleston Gray)medwcgB417
MELO3C031708.2Watermelon (97103) v1medwmB448
MELO3C031708.2Watermelon (97103) v1medwmB472
MELO3C031708.2Silver-seed gourdcarmedB0307
MELO3C031708.2Silver-seed gourdcarmedB0384
MELO3C031708.2Cucumber (Chinese Long) v3cucmedB246
MELO3C031708.2Cucumber (Chinese Long) v3cucmedB566
MELO3C031708.2Watermelon (97103) v2medwmbB421
MELO3C031708.2Watermelon (97103) v2medwmbB424
MELO3C031708.2Wax gourdmedwgoB531
MELO3C031708.2Wax gourdmedwgoB558