MELO3C031696.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGCCATTTTGCCATTGTTCTGTCAGCCACACACTTATTAACTTTCAACAAAACTTACACTTATCTTTGTAGACCGATGAAAATATATAGATGGTAGGCTTTTCAACTGAAAATAAGTTTCAGCCCATTCCTCCTCCATTGATGGCGAGCTTGGGAGGCTTCTAATTTCTAATTTCTTTTAAATCTTCTTCCTTCATACTACGACAACACCCAAAAAAACATCTTCCTTTTAAATTTCTTCCTTTAGTTTCTCTTCCTTTTAAGCCTTCTTCCTTCACCGACTTCTTCCTTCACGGTAGTTCTCTCGTAAAATCTCAATCTCCCTAAATTTCTAATTTCTTTTTTTTTAATTTCTAATTTCTCTTTGTTCGATTTATATTTCCACATATTTACCTAAATATCTTAGTATATATTTTTTCTTTTCTTTTGTTTAATCTATATTTCCAATATTTTTACGAAAATATCTTAAAATATTTTTCATTAAATTTTTTTTTCGTTTTTCATTTTCCATAAAAATTTTAAAAATATTTTTCATAAAAATCTTAAAAGGATTCACCTATATCTTCGCATTATATTATTTATTTTTGTTAAATTTATTTTTTAAATTATTTACATAAATTTTAACTAGATTTTCGTTTTATCTTTACAGGTCAGAGTCATGGTGATTGGTTGTATCTTTGCCAAGTATTACTCGGTGTGAGCCCACTTGCTGAACAAATCAGGGGTTTGAGGTTGAGTTTAACATGGCTGGGGGTAGAGTTTTCTGGATTGGCTGACGATGCCGATGAGCAAACTATCACAAGATATGCACGAGCATATATTTTACAGTTGATGGGTGAGAGTATATTCGCAGATAAATCAACTTGTTATGTGCACCTAATATTCTTACCATTCTTATCTAATATGCACCACACGTCGCAATATTCGTGGAGTGGAGCCTGTTTAGCATGGTTGTATAGATAATTATGCAAGACATCCAAACAAGGTATTCGTGAAATTGTTGGACCACTAATATTGTTACAATTATGGGCTTGGAAACGATTCCCAATAGTTGCTCCACAACTCCTGCATGTTAATGCTCATCAATTACACGGTCGAGCTTATGGTTCAAGGTATGCTATTTCAATTTAATTTTGATTAACAATAACTTTTTATACATAGTACATTTAAAATCTAAAATATTAGTTGAACAATACAGATGAAGAGATCAATTTTGTGTGACCAAGTTGGCTACACATGTAGTCTCTAAGTATAGATACATGTTTGATCTTCTTCAACCTGATCAAGTACGTCTTGCTAAACTTGAAGTTCAAGTTCCATATTATTTGTTTCATAGAATATGTTGTGTTTCAAATTATCTGGGAGCCATACAAAGCTGTCATAGATAGTTTGCCACATTTATGTACGAACGGTTACGACATATGGCGGACGATTAGTCCTCTTATATGTTTCTACATTGGTGAGTAGCATCATCCTGACAAAACACTTGGACAGTTTGATATTCAACAAGATGTTCCACGTGGTTGTAATACTAAACCACTGTTGCACGACATTGACCTGAGGACTGCTGATTGGTTAGATAGAGTTGCTCATTTAGTGATGCGATGGCTAAATCGCAGAAGGTTAAGCTACAGGACCTCCAATTGGGCAATTTGATACGGATGTAACTCAAGAATACATCCATTGGTATAAAAACATTACCAGGCTCTATATCACCCAACCGAGAGCTGCTGTAGGTCATCTGGAACACATTTAAATATTGTATAATTATTTTTAGTGCAAATTTATTTTCAATGATTTCTAATTCATTTTAATATTTCACAGAGATTAAACAAAAGTAGACTTCGAGTTGTTGCAGATGATCCAAGGTCCTAAATATATGCAATGATAACGAGCAGTACATCGATAGCATACACTATATGTATGATGTACCTATTGTACCTGCTCCAGTTCAAAGGAGACGTACTCTAGTGCAAAAGCTTGATGAATTGGAAGAAGTTGACCAAAACGTGGAAGAAGTGCCTCCTATCACACAAACACAGAGCGAGACTGGTTACGTTAGTCCAATGATGATGATGTCGGCGTTTGGAACGAGATATTATTATCCAGGAGTTGGTCAATCGTCAGGCTTCGGAACATGATATTACAATTTAGAGGCAAGTCCATCATCATCAAACTTTGGACAAGAATACTATGATTTAGGGACCAATCCATCATCTTCATACATGCATGGTCATGGATGCAGTCGTGGAGAACATAACGAATATTTATACTACGAAGCGCCCGCAGTGGTACCCGATGAACCAAATGAGCAACAACAACAAGAGAATCAGAAGGAACTACAACAACAAAGAGTGCAGAGTCGACGACGACAACCAACTAGAAATCGTCGACGTCCAAGTTGTGGAACACATTGATTTTTTTCATTAAATGAAAATTGTTAAATTATCGTATTAGACAT ATGGCCATGCCATTTTGCCATTGTTCTGTCAGCCACACACTTATTAACTTTCAACAAAACTTACACTTATCTTTGTAGACCGATGAAAATATATAGATGGTAGGCTTTTCAACTGAAAATAAGTTTCAGCCCATTCCTCCTCCATTGATGGCGAGCTTGGGAGGCTTCTAATTTCTAATTTCTTTTAAATCTTCTTCCTTCATACTACGACAACACCCAAAAAAACATCTTCCTTTTAAATTTCTTCCTTTAGTTTCTCTTCCTTTTAAGCCTTCTTCCTTCACCGACTTCTTCCTTCACGGTCAGAGTCATGGTGATTGGTTGTATCTTTGCCAAGTATTACTCGGTGTGAGCCCACTTGCTGAACAAATCAGGGGTTTGAGGTTGAGTTTAACATGGCTGGGGGTAGAGTTTTCTGGATTGGCTGACGATGCCGATGAGCAAACTATCACAAGATATGCACGAGCATATATTTTACAGTTGATGGGTGAGAGTATATTCGCAGATAAATCAACTTGTTATGTGCACCTAATATTCTTACCATTCTTATCTAATATGCACCACACGTCGCAATATTCGTGGAGTGGAGCCTGTTTAGCATGGTTGTATAGATAATTATGCAAGACATCCAAACAAGGTATTCGTGAAATTGTTGGACCACTAATATTGTTACAATTATGGGCTTGGAAACGATTCCCAATAGTTGCTCCACAACTCCTGCATGTTAATGCTCATCAATTACACGGTCGAGCTTATGGTTCAAGATGAAGAGATCAATTTTGTGTGACCAAGTTGGCTACACATGTAGTCTCTAAGTATAGATACATGTTTGATCTTCTTCAACCTGATCAAGTACGTCTTGCTAAACTTGAAGTTCAAGTTCCATATTATTTGTTTCATAGAATATGTTGTGTTTCAAATTATCTGGGAGCCATACAAAGCTGTCATAGATAGTTTGCCACATTTATGTACGAACGGTTACgACATATGGCGGACGATTAGTCCTCTTATATGTTTCTACATTGGTGAGTAGCATCATCCTGACAAAACACTTGGACAGTTTGATATTCAACAAGATGTTCCACGTGGTTGTAATACTAAACCACTGTTGCACGACATTGACCTGAGGACTGCTGATTGGTTAGATAGAGTTGCTCATTTAGTGATGCGATGGCTAAATCGCAGAAGGTTAAGCTACAGGACCTCCAATTGGGCAATTTGATACGGATGTAACTCAAGAATACATCCATTGGTATAAAAACATTACCAGGCTCTATATCACCCAACCGAGAGCTGCTAGATTAAACAAAAGTAGACTTCGAGTTGTTGCAGATGATCCAAGGTCCTAAATATATGCAATGATAACGAGCAGTACATCGATAGCATACACTATATGTATGATGTACCTATTGTACCTGCTCCAGTTCAAAGGAGACGTACTCTAGTGCAAAAGCTTGATGAATTGGAAGAAGTTGACCAAAACGTGGAAGAAGTGCCTCCTATCACACAAACACAGAGCGAGACTGGTTACGTTAGTCCAATGATGATGATGTCGGCGTTTGGAACGAGATATTATTATCCAGGAGTTGGTCAATCGTCAGGCTTCGGAACATGATATTACAATTTAGAGGCAAGTCCATCATCATCAAACTTTGGACAAGAATACTATGATTTAGGGACCAATCCATCATCTTCATACATGCATGGTCATGGATGCAGTCGTGGAGAACATAACGAATATTTATACTACGAAGCGCCCGCAGTGGTACCCGATGAACCAAATGAGCAACAACAACAAGAGAATCAGAAGGAACTACAACAACAAAGAGTGCAGAGTCGACGACGACAACCAACTAGAAATCGTCGACGTCCAAGTTGTGGAACACATTGATTTTTTTCATTAAATGAAAATTGTTAAATTATCGTATTAGACAT ATGTATGATGTACCTATTGTACCTGCTCCAGTTCAAAGGAGACGTACTCTAGTGCAAAAGCTTGATGAATTGGAAGAAGTTGACCAAAACGTGGAAGAAGTGCCTCCTATCACACAAACACAGAGCGAGACTGGTTACGTTAGTCCAATGATGATGATGTCGGCGTTTGGAACGAGATATTATTATCCAGGAGTTGGTCAATCGTCAGGCTTCGGAACATGA MYDVPIVPAPVQRRRTLVQKLDELEEVDQNVEEVPPITQTQSETGYVSPMMMMSAFGTRYYYPGVGQSSGFGT
BLAST of MELO3C031696.2.1 vs. NCBI nr
Match: XP_011652738.1 (PREDICTED: uncharacterized protein LOC105435074 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10 Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 0
BLAST of MELO3C031696.2.1 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-09 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C031696.2.1 vs. NCBI nr
Match: XP_016900498.1 (PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-09 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C031696.2.1 vs. TrEMBL
Match: tr|A0A1S3BLK4|A0A1S3BLK4_CUCME (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.1e-10 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of MELO3C031696.2.1 vs. TrEMBL
Match: tr|A0A1S4DWZ9|A0A1S4DWZ9_CUCME (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.1e-10 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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