MELO3C031190.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTAGCTTGGATTTGGCTACATAGTGTGGCAAGGCGGTAAAGAGACACGTGTAAAGTTGTAATCCTGAGTCCAAAGTTGGAACTTTGTGTTGGAGATTAGTTTAAGAAGTTCTGCTTACTAGGCGTTCAACTTGTTATCTCACGGAGAGGTATGCATTGGGTGTCTAAACAACGCGTCTCCTTCTGGTCGCATGAAGTGGCTAGTGGAACGAGGAGTGACATTGGGTGATTTGTTTACTAAGCTAGAGAATACCTCTTTTTTCTCTAAGATTGATTTGAGATCAAATTGTCATCAACTAAGAATTAAGAAGTTACATATACCAAAAATGACATTCAAAATGTGTTTTGGACATTCTAAATTCTTAGGACGTCATTTAGCTTGCTTAACACCCAACCTGCATTGGGCTTAGTGAATTGAATATTTATCGCCTAATAAATTTTATAATTTTTCTTTTAAATATTTGATTCAGTTTCTAACTTTTGCTTTTATCCCATTTTCAGTATTTTCTTACTTAAATAATAAACTAATTTTTTAAAAAAAAAGTAGAAAAAGAAAAACAAAATAAAGAAACGAAATGATATAACTTGCAATTACAGAGTTCATTGTGCACCAAAAACTATTTCTTCTTATCTTTTATCTCTCTAATTTGTTTTAATTAATTGTGTGGATGTAGGATAACATGCACTAATTATAACATTAATTATGAAATAAATTCTCCAATTTTTACATATATTTCATATATTTCTTACTTTACTTTTATTTTATTTTATTATTAGTTGTGCATGAATATGAAATGCTAACTTGTAGTTACATAGAATCTGTTATGGGTTCTCAAAAATTCTCGTGCTTCCTTCTTATAATTATTTATGGTAAATGGATGTTAATATCTAACTTACAATTATAATTGACACTCTTTTCAGGGAAACTTTTTAGTATTGCAGTTTCCTACAATACCATCAAACCTTCCCTATATATTTGAACCTTTTGATTATATCCTCTTTGCAATCAAAGAACTTGAAAACAAAAACAAATAATTGATATATTATTACATTGTCATAGTTCTTTATCTTTTTCATTGGCAAAATGACTTCATCTTTAGCACTTGCATTCTCAATGTTTTTGTTGCTACCCATTAGCTTACGTGCCACAGATGAATTGATCTCACTTTTACCTGAAACTACAGTCACTATTTTTAACAAAGTGGGTGGCCCTCTGTTGGACATTCATTGTAGATCCAAGCAAAATGATCTAGGAGTTAATGTCGTATAGTCAAATAAAAGTTACTCATTTAACTTTAGACCCAACATCTGGGGAACGACATTATTTTATTGCGTCTTCGAATGGGTAGGTCAACCCCTCTACTTCACCA ATGTGTTAGCTTGGATTTGGCTACATAGTGTGGCAAGGCGGTAAAGAGACACGTGTAAAGTTGTAATCCTGAGTCCAAAGTTGGAACTTTGTGTTGGAGATTAGTTTAAGAAGTTCTGCTTACTAGGCGTTCAACTTGTTATCTCACGGAGAGGTATGCATTGGGTGTCTAAACAACGCGTCTCCTTCTGGTCGCATGAAGTGGCTAGTGGAACGAGGAGTGACATTGGCACTTGCATTCTCAATGTTTTTGTTGCTACCCATTAGCTTACGTGCCACAGATGAATTGATCTCACTTTTACCTGAAACTACAGTCACTATTTTTAACAAAGTGGGTGGCCCTCTGTTGGACATTCATTGTAGATCCAAGCAAAATGATCTAGGAGTTAATGTCGTATAGTCAAATAAAAGTTACTCATTTAACTTTAGACCCAACATCTGGGGAACGACATTATTTTATTGCGTCTTCGAATGGGTAGGTCAACCCCTCTACTTCACCA ATGAAGTGGCTAGTGGAACGAGGAGTGACATTGGCACTTGCATTCTCAATGTTTTTGTTGCTACCCATTAGCTTACGTGCCACAGATGAATTGATCTCACTTTTACCTGAAACTACAGTCACTATTTTTAACAAAGTGGGTGGCCCTCTGTTGGACATTCATTGTAGATCCAAGCAAAATGATCTAGGAGTTAATGTCGTATAG MKWLVERGVTLALAFSMFLLLPISLRATDELISLLPETTVTIFNKVGGPLLDIHCRSKQNDLGVNVV
BLAST of MELO3C031190.2.1 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 100.1 bits (248), Expect = 2.9e-18 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 3.8e-18 Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. NCBI nr
Match: XP_013603996.1 (PREDICTED: uncharacterized protein LOC106311341 [Brassica oleracea var. oleracea]) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05 Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. NCBI nr
Match: XP_009111091.1 (PREDICTED: uncharacterized protein LOC103836563 [Brassica rapa]) HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04 Identity = 23/51 (45.10%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. TAIR10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family) HSP 1 Score: 46.2 bits (108), Expect = 9.1e-06 Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.6e-04 Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. TrEMBL
Match: tr|B0F817|B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.9e-18 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. TrEMBL
Match: tr|B0F818|B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.5e-18 Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of MELO3C031190.2.1 vs. TrEMBL
Match: tr|A0A0D3DIV6|A0A0D3DIV6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=106311341 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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