MELO3C030658.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030658.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Cytochrome P450
Location	chr04 : 23419693 .. 23419882 (-)
Sequence length	190

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTGGCGGAGGGAATTCATTGACGACGGACAAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACAGCGGGACGGACACGACGGAGACAGTGATAGAGTGGGGGATGGTGGAATCGATAGCGAATAAGGAAGTTTAGAGGAAGATTGTGGAAGAAATTAAAGATACGATTGGTGAGAGAAAAGTAGAG

mRNA sequence

TGGTGGCGGAGGGAATTCATTGACGACGGACAAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACAGCGGGACGGACACGACGGAGACAGTGATAGAGTGGGGGATGGTGGAATCGATAGCGAATAAGGAAGTTTAGAGGAAGATTGTGGAAGAAATTAAAGATACGATTGGTGAGAGAAAAGTAGAG

Coding sequence (CDS)

GGTGGCGGAGGGAATTCATTGACGACGGACAAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACAGCGGGACGGACACGACGGAGACAGTGATAGAGTGGGGGATGGTGGAATCGATAGCGAATAAGGAAGTTTAG

Protein sequence

GGGGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV

Homology

[Close]

BLAST of MELO3C030658.2.1 vs. NCBI nr
Match: XP_008446777.2 (PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 77A3-like [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-10
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 2   GGGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           GGGNS  T++ELVTLCSEFLN GTDTT TVIEWGM E IAN+E+
Sbjct: 285 GGGNSSATEEELVTLCSEFLNGGTDTTATVIEWGMAELIANEEI 328

[Close]

BLAST of MELO3C030658.2.1 vs. NCBI nr
Match: XP_011655840.1 (PREDICTED: cytochrome P450 77A3-like [Cucumis sativus] >KGN52206.1 hypothetical protein Csa_5G615280 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 8.3e-09
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 1   GGGGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G G +S  TD+ELVTLCSEFLN GTDTT TVIEWGM E IAN+E+
Sbjct: 285 GEGKSSSATDEELVTLCSEFLNGGTDTTATVIEWGMAELIANEEI 329

[Close]

BLAST of MELO3C030658.2.1 vs. NCBI nr
Match: XP_022957595.1 (cytochrome P450 77A3-like [Cucurbita moschata])

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-07
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           GG +  TD+ELVTLCSEFLN GTDTT T IEWGM E I N  V
Sbjct: 290 GGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGV 332

[Close]

BLAST of MELO3C030658.2.1 vs. NCBI nr
Match: XP_022984653.1 (cytochrome P450 77A3-like [Cucurbita maxima])

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-07
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           GG +  TD+ELVTLCSEFLN GTDTT T IEWGM E I N  V
Sbjct: 290 GGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGV 332

[Close]

BLAST of MELO3C030658.2.1 vs. NCBI nr
Match: XP_023546857.1 (cytochrome P450 77A3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-07
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           GG +  TD+ELVTLCSEFLN GTDTT T IEWGM E I N  V
Sbjct: 290 GGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGV 332

[Close]

BLAST of MELO3C030658.2.1 vs. TAIR10
Match: AT3G10560.1 (Cytochrome P450 superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-09
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  +  +D++LVTLCSEFLN+GTDTT   IEWG+ E IAN E+
Sbjct: 296 GSETTPSDEDLVTLCSEFLNAGTDTTGAAIEWGIAELIANPEI 338

[Close]

BLAST of MELO3C030658.2.1 vs. TAIR10
Match: AT5G04660.1 (cytochrome P450, family 77, subfamily A, polypeptide 4)

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-09
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  +  +++ELVTLCSEFLN GTDTT T IEWG+ + IAN E+
Sbjct: 294 GRKTTPSNEELVTLCSEFLNGGTDTTGTAIEWGIAQLIANPEI 336

[Close]

BLAST of MELO3C030658.2.1 vs. TAIR10
Match: AT5G04630.1 (cytochrome P450, family 77, subfamily A, polypeptide 9)

HSP 1 Score: 55.8 bits (133), Expect = 7.8e-09
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  +  +D++LVTLCSEFLN+GTDTT T IEWG+ E I+N ++
Sbjct: 291 GRETSPSDEDLVTLCSEFLNAGTDTTGTAIEWGIAELISNPKI 333

[Close]

BLAST of MELO3C030658.2.1 vs. TAIR10
Match: AT3G10570.1 (cytochrome P450, family 77, subfamily A, polypeptide 6)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-08
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 9   TDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           +++ELV+LCSEFLN GTDTT T IEWG+ + I N E+
Sbjct: 302 SNEELVSLCSEFLNGGTDTTGTAIEWGIAQLIVNPEI 338

[Close]

BLAST of MELO3C030658.2.1 vs. TAIR10
Match: AT1G64940.1 (cytochrome P450, family 87, subfamily A, polypeptide 6)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-06
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 10  DKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           + E+V+LCSEFLN+GTDTT T ++W M   + N E+
Sbjct: 300 EDEIVSLCSEFLNAGTDTTATALQWIMANLVKNPEI 335

[Close]

BLAST of MELO3C030658.2.1 vs. Swiss-Prot
Match: sp|Q9LZ31|C77A4_ARATH (Cytochrome P450 77A4 OS=Arabidopsis thaliana OX=3702 GN=CYP77A4 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.2e-08
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  +  +++ELVTLCSEFLN GTDTT T IEWG+ + IAN E+
Sbjct: 294 GRKTTPSNEELVTLCSEFLNGGTDTTGTAIEWGIAQLIANPEI 336

[Close]

BLAST of MELO3C030658.2.1 vs. Swiss-Prot
Match: sp|O48928|C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max OX=3847 GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  S  +D ELV+LCSEFLN GTDTT T +EWG+ + IAN  V
Sbjct: 290 GKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPNV 332

[Close]

BLAST of MELO3C030658.2.1 vs. Swiss-Prot
Match: sp|P37124|C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena OX=4111 GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.6e-06
Identity = 26/43 (60.47%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G NS  T  ELVTLCSEFLN GTDTT T IEW +   I N  +
Sbjct: 295 GRNSTPTYPELVTLCSEFLNGGTDTTATAIEWAIGRLIENPNI 337

[Close]

BLAST of MELO3C030658.2.1 vs. Swiss-Prot
Match: sp|P37123|C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena OX=4111 GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-05
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  S  T+ ELVTLCSEFLN GTDTT T +EWG+   + N  +
Sbjct: 282 GRKSGPTNAELVTLCSEFLNGGTDTTATALEWGIGRLMENPTI 324

[Close]

BLAST of MELO3C030658.2.1 vs. TrEMBL
Match: tr|A0A1S3BGP7|A0A1S3BGP7_CUCME (LOW QUALITY PROTEIN: cytochrome P450 77A3-like OS=Cucumis melo OX=3656 GN=LOC103489405 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-10
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 2   GGGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           GGGNS  T++ELVTLCSEFLN GTDTT TVIEWGM E IAN+E+
Sbjct: 285 GGGNSSATEEELVTLCSEFLNGGTDTTATVIEWGMAELIANEEI 328

[Close]

BLAST of MELO3C030658.2.1 vs. TrEMBL
Match: tr|A0A0A0KWN5|A0A0A0KWN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615280 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.5e-09
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 1   GGGGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G G +S  TD+ELVTLCSEFLN GTDTT TVIEWGM E IAN+E+
Sbjct: 285 GEGKSSSATDEELVTLCSEFLNGGTDTTATVIEWGMAELIANEEI 329

[Close]

BLAST of MELO3C030658.2.1 vs. TrEMBL
Match: tr|A0A2I4HB86|A0A2I4HB86_9ROSI (cytochrome P450 77A3-like OS=Juglans regia OX=51240 GN=LOC109015403 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-07
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  S  TD ELVTLCSEFLN GTDTT T IEWG+ + IAN EV
Sbjct: 325 GRKSSPTDAELVTLCSEFLNGGTDTTATAIEWGIAQLIANPEV 367

[Close]

BLAST of MELO3C030658.2.1 vs. TrEMBL
Match: tr|W9S4G3|W9S4G3_9ROSA (Cytochrome P450 77A3 OS=Morus notabilis OX=981085 GN=L484_016787 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-06
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G +S+ T  ELVTLCSEFLN GTDTT T +EWG+ + IAN EV
Sbjct: 286 GRSSVPTKDELVTLCSEFLNGGTDTTGTAVEWGIAQLIANPEV 328

[Close]

BLAST of MELO3C030658.2.1 vs. TrEMBL
Match: tr|A0A1Q3BMP2|A0A1Q3BMP2_CEPFO (p450 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12808 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 3   GGNSLTTDKELVTLCSEFLNSGTDTTETVIEWGMVESIANKEV 46
           G  S  +D+ELVTLCSEFLN GTDTT T IEWG+ + I N E+
Sbjct: 212 GRKSAPSDEELVTLCSEFLNGGTDTTATAIEWGIAQLITNPEI 254

The following BLAST results are available for this feature:

BLAST of MELO3C030658.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446777.2	3.4e-10	77.27	PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 77A3-like [Cucumis melo]	[more]
XP_011655840.1	8.3e-09	73.33	PREDICTED: cytochrome P450 77A3-like [Cucumis sativus] >KGN52206.1 hypothetical ...	[more]
XP_022957595.1	4.6e-07	69.77	cytochrome P450 77A3-like [Cucurbita moschata]	[more]
XP_022984653.1	4.6e-07	69.77	cytochrome P450 77A3-like [Cucurbita maxima]	[more]
XP_023546857.1	4.6e-07	69.77	cytochrome P450 77A3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C030658.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10560.1	2.0e-09	60.47	Cytochrome P450 superfamily protein	[more]
AT5G04660.1	4.5e-09	60.47	cytochrome P450, family 77, subfamily A, polypeptide 4	[more]
AT5G04630.1	7.8e-09	58.14	cytochrome P450, family 77, subfamily A, polypeptide 9	[more]
AT3G10570.1	5.0e-08	62.16	cytochrome P450, family 77, subfamily A, polypeptide 6	[more]
AT1G64940.1	3.6e-06	52.78	cytochrome P450, family 87, subfamily A, polypeptide 6	[more]

BLAST of MELO3C030658.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZ31\|C77A4_ARATH	8.2e-08	60.47	Cytochrome P450 77A4 OS=Arabidopsis thaliana OX=3702 GN=CYP77A4 PE=2 SV=1	[more]
sp\|O48928\|C77A3_SOYBN	1.4e-07	60.47	Cytochrome P450 77A3 OS=Glycine max OX=3847 GN=CYP77A3 PE=2 SV=1	[more]
sp\|P37124\|C77A2_SOLME	2.6e-06	60.47	Cytochrome P450 77A2 OS=Solanum melongena OX=4111 GN=CYP77A2 PE=2 SV=1	[more]
sp\|P37123\|C77A1_SOLME	1.0e-05	55.81	Cytochrome P450 77A1 (Fragment) OS=Solanum melongena OX=4111 GN=CYP77A1 PE=2 SV=...	[more]

BLAST of MELO3C030658.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGP7\|A0A1S3BGP7_CUCME	2.2e-10	77.27	LOW QUALITY PROTEIN: cytochrome P450 77A3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0KWN5\|A0A0A0KWN5_CUCSA	5.5e-09	73.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615280 PE=3 SV=1	[more]
tr\|A0A2I4HB86\|A0A2I4HB86_9ROSI	8.8e-07	69.77	cytochrome P450 77A3-like OS=Juglans regia OX=51240 GN=LOC109015403 PE=3 SV=1	[more]
tr\|W9S4G3\|W9S4G3_9ROSA	3.3e-06	65.12	Cytochrome P450 77A3 OS=Morus notabilis OX=981085 GN=L484_016787 PE=3 SV=1	[more]
tr\|A0A1Q3BMP2\|A0A1Q3BMP2_CEPFO	4.4e-06	62.79	p450 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_128...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	iron ion binding
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR036396	Cyt_P450_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C030658.2	MELO3C030658.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030658.2.1.five_prime_UTR.1	MELO3C030658.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030658.2.1.CDS.1	MELO3C030658.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030658.2.1.three_prime_UTR.1	MELO3C030658.2.1.three_prime_UTR.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030658.2.1.exon.1	MELO3C030658.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C030658.2.1	MELO3C030658.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036396	Cytochrome P450 superfamily	GENE3D	G3DSA:1.10.630.10		coord: 2..45 e-value: 2.4E-5 score: 25.3
IPR036396	Cytochrome P450 superfamily	SUPERFAMILY	SSF48264	Cytochrome P450	coord: 6..44
None	No IPR available	PANTHER	PTHR24298	FAMILY NOT NAMED	coord: 3..45
None	No IPR available	PANTHER	PTHR24298:SF47	CYTOCHROME P450 77A4-RELATED	coord: 3..45