MELO3C029616.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C029616.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 13553879 .. 13558322 (+)
Sequence length1164
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTGTTTTTTAAGTTAGTACATCCTTGGCACAGACCGATCTACCGATGTATTCCAAGAACCCGATAATTTCGCTTCATAACGTGCCTTCAAATTATATAACTAACTCTGTTGCCTTTAGTGCTCAATCCTTGACCCATGATAATGGGAAACCAATTCTCGTCTGTGAGTACTGCAAGAAACAACGGCATACCAAGGATCAGTGTTGGAAACTCCACGGTCAGCCCCCAAGAGGTAACAAATGCTCCTCCAACGAGCAACAGAACTTAAGGCTTATATTGAGAGACTGCCAGCACCTCTCAGCCCATTGGCCTTACTGCTAGTCAGACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGACTGTCCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGACTGCCAGCACCTCTCAGCCCATTGGCCTTACTGCTAGTCAGACCAGCTCTCCTGCTCTAAACGCCATTACTCAACTAGGTATATCTCAGTCCCTTGGCCTTATAAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGCACTTTGTCACTTATACCCGCTATGCCGGTAATGAGAAAATTCGGATAGCCAATGGCTCTTTAGCCCCGGTTGCTGGAAAATGACAAATAGTCCTCTATGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACTCGTGAGCTGCACTGCAAAGCTACTTTCTTACTTGAGTCTGTTTGCTTTCAGGACTTGAAGTCGGGGAGGACGATTGGCACTGCCCGACATAGAAGGGGACTTTACATACTTAATGATGATACCTCCGGTAGTAGTATCTCTACGACTAGTTTACTATCTTCATATTTTAGCACCTCTGAACATTACTTTATGTTGTGGCATTTTCGGTTAGGTCACCCAAACTTTACGTATATGAAATATTTGTTTCCCCATCTCTTTCTTAAAATAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTCACTCACAACCATATAAACCCACACAACCGTTTACCCTTATCCATAGTGACGTTTGGGGCCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTAGTTTGTAACCTTCATTGATGATCATACTCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAATTGCTATTCTTCGAAGAGATAACGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCTAAGGGGATTGTTCACCAAAACTCGTGCGCCTACACTTTCTTTCAACAAAATGGAGTGGCCGAGCGAAAAAATCGTCACCTTCTGGAAGTAGCACGTTCCCTTATGCTTTCCACTTCCCTTCTTTCATACCTGTGGGGAGATGCTATTCTTACAGCAGCTCATTTAATCAATAGAATGCCTTCTCGTATCCTCCACCTTCAAACTCCCTTAGAATGCCTTAAGGAGTCCTACCCCTCTACTCGTCACGTTTCAAAGGTGACCAAATTTACCCCTCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCTCCTCACCAGCGTGGTTATAAATGTTTTCACCCGCCGTCGAGGAAATACTTTGTCACCATGGATGTTACTTTCTGTGAGGACCAACCCTATTTCTCCTTGACGCAAGAATCCTTACCCTAGACCGTCCATGTACGAAAACTAAGTATCTAGGGCTTTCACAACCCATTATCCAATCAATCCATCTTTTTATCAAAATGTTTATTCTTGAGAACTTTTTCTAAGAAATCCCAATTAACATGATCAAAAGCCTTCTCAAGGTCTAACTGGAGGATCCAACTTTCCTCTTTTTGGCTCCATAATCCTCTACCCTCCATTGCTATAAAAATAGGATCCATTATTTGTCTTCCTTCAATAAAGGCACTTTGAGTCGGAGCAATGATGGAGGGCATGACTTTCTTTAGTCTTTCGGCCAGCACCTTAGCAATTACCTTAAAGGTCAAGGTTGTAAGGCTGATTGGTCTAGTATCTTTTACTTCAACAGCATTCTCTTTTCGTTTTTTTTTTTTCTTTTGTATAATACAAATAAAATTTTCCTGCACACACAAATTCAGCTTTCCGTTATAAAATTCGTCAAATAAGGTGAGAAAATTTGCCTTCATTAAATCCCAAAATTTCAAAAGAAATTCTGATAGGAATCCATCTGGTCCTGGAGCTTTACCCTTCCCAAGGTTTTTTACAGCTGCATAATTTCTGCCTCAGAAAATTTAGCTGTAAGTGCTGAATTCTGATTTGTGGTGATTCATGGCCAATCAAAGTTCAATGGGATATGACTCTGACCTGGGCTTTTAGCATATAAGTTGCTGTAGAAAGTCAGAATCACCCCCTCAATCTCTCTATACAACTTAGTTGGAAACCCTTGGTCATTAACCAGCTCAGGAATTAGATTTCTCATTTTATTGCAGCAAGAAATCGATGAAAAAAACTCATGTTTTCTTCTCCCAAACGAATCCAGTTTAGTTTACTTTTCTGGATTAAATTTATTTCCTCCAATCTGTAGAGTGCCTTTCAATCAGCCTTCAAAGAGAATCTAACATCTTGTTAAACATCTGAAAAGTGTACTGATTCAGCCAGTGCATCCCCTCATTGAATGACTAATCAAGTCATCCTCCTTCCTACTTTGGTTCTCCTGAAATACAGCAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAGTGAATCTACCATTGCTAAGAGAAACCTCGAAGAGTTTAGCTCGATGAATAACATTATTAAACTTCCTCACACATTTAGTGGTTCTTCCACAAGGGAATCGTTCATGTGCCCATCTTGTGATGTTGAAGTCACCTCCTACACACCATGCCCCATTACAATAATTTGACAAGAAAAGTAGCTCGAGCCAAACAAATTTTCTTTTGTTGTAGACGTTCAGGCCATAAACATTTGTAATCTAACAAGTATTTTTACAAATTGTTGTAGACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

mRNA sequence

ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAACAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

Coding sequence (CDS)

ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAACAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

Protein sequence

MVSKRSNNEILEKILGITRTKTATAAAVDTTMEKLLQRIQTPPIYPMGQHSPPSTQPSGQKPLHAPPLSGAWAYASPSVNLTAHPIRFYASSPVQPSHPSGHPPPLTRSAFITAGQQPSKLSNLYSSTNLSVDHLQQPFFYRNGADQHHNRSGIEAGESSAPSNYGQPYVRGLGINQTYRRTTSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTTNHSFTATFTFLNLMLKTKPAQPTEWLFFKVHSMTVAFFVEHPTDTKSKRGRPPFERSSFKKKRKMVRQVSCSSINPLFSKSSSQAVLMKKWSLEILLRKNLPLTKRICSLASIFNVSTTIKLLMSHKVKIPPEVPWDSTKYQPISSKLHKDLIKLMSNSSFFDS
Homology
[Close]
BLAST of MELO3C029616.2.1 vs. NCBI nr
Match: XP_016899809.1 (PREDICTED: uncharacterized protein LOC107990668 [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 183 TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTT 224
           TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLT+
Sbjct: 93  TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTS 133

[Close]
BLAST of MELO3C029616.2.1 vs. TrEMBL
Match: tr|A0A1S4DUZ9|A0A1S4DUZ9_CUCME (uncharacterized protein LOC107990668 OS=Cucumis melo OX=3656 GN=LOC107990668 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 183 TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTT 224
           TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLT+
Sbjct: 93  TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTS 133

The following BLAST results are available for this feature:
BLAST of MELO3C029616.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899809.13.7e-1297.56PREDICTED: uncharacterized protein LOC107990668 [Cucumis melo][more]
BLAST of MELO3C029616.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029616.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029616.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DUZ9|A0A1S4DUZ9_CUCME2.4e-1297.56uncharacterized protein LOC107990668 OS=Cucumis melo OX=3656 GN=LOC107990668 PE=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C029616.2MELO3C029616.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C029616.2.1MELO3C029616.2.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029616.2.1.CDS.1MELO3C029616.2.1.CDS.1CDS
MELO3C029616.2.1.CDS.2MELO3C029616.2.1.CDS.2CDS
MELO3C029616.2.1.CDS.3MELO3C029616.2.1.CDS.3CDS
MELO3C029616.2.1.CDS.4MELO3C029616.2.1.CDS.4CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029616.2.1.exon.1MELO3C029616.2.1.exon.1exon
MELO3C029616.2.1.exon.2MELO3C029616.2.1.exon.2exon
MELO3C029616.2.1.exon.3MELO3C029616.2.1.exon.3exon
MELO3C029616.2.1.exon.4MELO3C029616.2.1.exon.4exon


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..165