MELO3C029616.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029616.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 13553879 .. 13558322 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTGTTTTTTAAGTTAGTACATCCTTGGCACAGACCGATCTACCGATGTATTCCAAGAACCCGATAATTTCGCTTCATAACGTGCCTTCAAATTATATAACTAACTCTGTTGCCTTTAGTGCTCAATCCTTGACCCATGATAATGGGAAACCAATTCTCGTCTGTGAGTACTGCAAGAAACAACGGCATACCAAGGATCAGTGTTGGAAACTCCACGGTCAGCCCCCAAGAGGTAACAAATGCTCCTCCAACGAGCAACAGAACTTAAGGCTTATATTGAGAGACTGCCAGCACCTCTCAGCCCATTGGCCTTACTGCTAGTCAGACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGACTGTCCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGACTGCCAGCACCTCTCAGCCCATTGGCCTTACTGCTAGTCAGACCAGCTCTCCTGCTCTAAACGCCATTACTCAACTAGGTATATCTCAGTCCCTTGGCCTTATAAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAAGTTTCTCGGAGCACTTTGTCACTTATACCCGCTATGCCGGTAATGAGAAAATTCGGATAGCCAATGGCTCTTTAGCCCCGGTTGCTGGAAAATGACAAATAGTCCTCTATGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACTCGTGAGCTGCACTGCAAAGCTACTTTCTTACTTGAGTCTGTTTGCTTTCAGGACTTGAAGTCGGGGAGGACGATTGGCACTGCCCGACATAGAAGGGGACTTTACATACTTAATGATGATACCTCCGGTAGTAGTATCTCTACGACTAGTTTACTATCTTCATATTTTAGCACCTCTGAACATTACTTTATGTTGTGGCATTTTCGGTTAGGTCACCCAAACTTTACGTATATGAAATATTTGTTTCCCCATCTCTTTCTTAAAATAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTCACTCACAACCATATAAACCCACACAACCGTTTACCCTTATCCATAGTGACGTTTGGGGCCCCTCCAAGGTCACCACCTCATCTGGGAAAAGGTAGTTTGTAACCTTCATTGATGATCATACTCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAAATTGCTATTCTTCGAAGAGATAACGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCTAAGGGGATTGTTCACCAAAACTCGTGCGCCTACACTTTCTTTCAACAAAATGGAGTGGCCGAGCGAAAAAATCGTCACCTTCTGGAAGTAGCACGTTCCCTTATGCTTTCCACTTCCCTTCTTTCATACCTGTGGGGAGATGCTATTCTTACAGCAGCTCATTTAATCAATAGAATGCCTTCTCGTATCCTCCACCTTCAAACTCCCTTAGAATGCCTTAAGGAGTCCTACCCCTCTACTCGTCACGTTTCAAAGGTGACCAAATTTACCCCTCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCTCCTCACCAGCGTGGTTATAAATGTTTTCACCCGCCGTCGAGGAAATACTTTGTCACCATGGATGTTACTTTCTGTGAGGACCAACCCTATTTCTCCTTGACGCAAGAATCCTTACCCTAGACCGTCCATGTACGAAAACTAAGTATCTAGGGCTTTCACAACCCATTATCCAATCAATCCATCTTTTTATCAAAATGTTTATTCTTGAGAACTTTTTCTAAGAAATCCCAATTAACATGATCAAAAGCCTTCTCAAGGTCTAACTGGAGGATCCAACTTTCCTCTTTTTGGCTCCATAATCCTCTACCCTCCATTGCTATAAAAATAGGATCCATTATTTGTCTTCCTTCAATAAAGGCACTTTGAGTCGGAGCAATGATGGAGGGCATGACTTTCTTTAGTCTTTCGGCCAGCACCTTAGCAATTACCTTAAAGGTCAAGGTTGTAAGGCTGATTGGTCTAGTATCTTTTACTTCAACAGCATTCTCTTTTCGTTTTTTTTTTTTCTTTTGTATAATACAAATAAAATTTTCCTGCACACACAAATTCAGCTTTCCGTTATAAAATTCGTCAAATAAGGTGAGAAAATTTGCCTTCATTAAATCCCAAAATTTCAAAAGAAATTCTGATAGGAATCCATCTGGTCCTGGAGCTTTACCCTTCCCAAGGTTTTTTACAGCTGCATAATTTCTGCCTCAGAAAATTTAGCTGTAAGTGCTGAATTCTGATTTGTGGTGATTCATGGCCAATCAAAGTTCAATGGGATATGACTCTGACCTGGGCTTTTAGCATATAAGTTGCTGTAGAAAGTCAGAATCACCCCCTCAATCTCTCTATACAACTTAGTTGGAAACCCTTGGTCATTAACCAGCTCAGGAATTAGATTTCTCATTTTATTGCAGCAAGAAATCGATGAAAAAAACTCATGTTTTCTTCTCCCAAACGAATCCAGTTTAGTTTACTTTTCTGGATTAAATTTATTTCCTCCAATCTGTAGAGTGCCTTTCAATCAGCCTTCAAAGAGAATCTAACATCTTGTTAAACATCTGAAAAGTGTACTGATTCAGCCAGTGCATCCCCTCATTGAATGACTAATCAAGTCATCCTCCTTCCTACTTTGGTTCTCCTGAAATACAGCAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAGTGAATCTACCATTGCTAAGAGAAACCTCGAAGAGTTTAGCTCGATGAATAACATTATTAAACTTCCTCACACATTTAGTGGTTCTTCCACAAGGGAATCGTTCATGTGCCCATCTTGTGATGTTGAAGTCACCTCCTACACACCATGCCCCATTACAATAATTTGACAAGAAAAGTAGCTCGAGCCAAACAAATTTTCTTTTGTTGTAGACGTTCAGGCCATAAACATTTGTAATCTAACAAGTATTTTTACAAATTGTTGTAGACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

mRNA sequence

ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAACAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

Coding sequence (CDS)

ATGGTATCAAAGCGAAGCAACAATGAAATCCTAGAAAAAATTTTAGGAATCACCCGGACCAAAACAGCCACCGCCGCTGCTGTGGACACCACCATGGAAAAACTACTCCAACGGATTCAGACGCCACCAATCTATCCAATGGGCCAACACTCGCCGCCGTCCACGCAACCTTCCGGCCAGAAACCACTTCACGCACCACCTTTGTCGGGCGCATGGGCCTACGCGTCGCCGTCCGTGAATCTCACCGCCCATCCCATCCGCTTCTACGCGTCATCGCCTGTCCAACCATCTCACCCTTCCGGTCATCCGCCGCCGCTTACGCGTTCCGCCTTCATCACCGCCGGACAGCAACCTTCAAAACTGTCAAATCTGTACAGCAGTACAAATCTGTCCGTCGACCATTTACAGCAACCTTTCTTCTATAGGAACGGGGCTGACCAACACCATAACAGATCGGGGATTGAAGCGGGCGAGTCATCAGCACCCTCCAATTATGGACAGCCATATGTTCGTGGTCTCGGGATTAATCAAACCTATAGGAGAACTACCAGCTCTCCTGCTCTAAACGCCATTACTCAACCAGATATATCTCAGTCCCTTGGCCTTATGAGTGTTGATGGGACGAATCTTTGGATTTTGGACTCGGGGGCCACAGATCACTTGACAACAAACCACTCTTTCACAGCAACCTTCACCTTTCTCAATTTAATGCTGAAAACAAAACCGGCCCAACCAACAGAATGGCTATTCTTCAAGGTGCATTCAATGACTGTTGCATTCTTTGTTGAGCATCCAACTGATACAAAATCTAAAAGGGGAAGGCCCCCATTTGAAAGATCCAGCTTCAAGAAGAAGAGGAAAATGGTCAGACAAGTGTCTTGCTCGTCTATTAACCCTCTATTTTCAAAATCCTCATCCCAAGCCGTATTGATGAAAAAATGGTCGTTAGAGATCTTGCTAAGGAAGAACCTTCCCTTGACCAAACGCATTTGTAGTCTAGCAAGTATTTTCAATGTTTCCACAACCATCAAATTGCTCATGTCCCACAAAGTTAAAATTCCACCCGAAGTGCCCTGGGATTCCACAAAGTACCAGCCTATATCTTCGAAACTCCATAAAGACTTGATAAAACTAATGTCAAACTCCTCATTCTTTGATTCTTGA

Protein sequence

MVSKRSNNEILEKILGITRTKTATAAAVDTTMEKLLQRIQTPPIYPMGQHSPPSTQPSGQKPLHAPPLSGAWAYASPSVNLTAHPIRFYASSPVQPSHPSGHPPPLTRSAFITAGQQPSKLSNLYSSTNLSVDHLQQPFFYRNGADQHHNRSGIEAGESSAPSNYGQPYVRGLGINQTYRRTTSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTTNHSFTATFTFLNLMLKTKPAQPTEWLFFKVHSMTVAFFVEHPTDTKSKRGRPPFERSSFKKKRKMVRQVSCSSINPLFSKSSSQAVLMKKWSLEILLRKNLPLTKRICSLASIFNVSTTIKLLMSHKVKIPPEVPWDSTKYQPISSKLHKDLIKLMSNSSFFDS
Homology
[Close]
BLAST of MELO3C029616.2 vs. NCBI nr
Match: XP_016899809.1 (PREDICTED: uncharacterized protein LOC107990668 [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 183 TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTT 224
           TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLT+
Sbjct: 93  TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTS 133

[Close]
BLAST of MELO3C029616.2 vs. TrEMBL
Match: tr|A0A1S4DUZ9|A0A1S4DUZ9_CUCME (uncharacterized protein LOC107990668 OS=Cucumis melo OX=3656 GN=LOC107990668 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 183 TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTT 224
           TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLT+
Sbjct: 93  TSSPALNAITQPDISQSLGLMSVDGTNLWILDSGATDHLTS 133

The following BLAST results are available for this feature:
BLAST of MELO3C029616.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899809.13.7e-1297.56PREDICTED: uncharacterized protein LOC107990668 [Cucumis melo][more]
BLAST of MELO3C029616.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C029616.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029616.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DUZ9|A0A1S4DUZ9_CUCME2.4e-1297.56uncharacterized protein LOC107990668 OS=Cucumis melo OX=3656 GN=LOC107990668 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029616.2.1MELO3C029616.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..165

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029616.2Watermelon (97103) v2medwmbB229
MELO3C029616.2Watermelon (97103) v2medwmbB238
MELO3C029616.2Wax gourdmedwgoB302
MELO3C029616.2Wax gourdmedwgoB310
MELO3C029616.2Cucumber (Gy14) v2cgybmedB034
MELO3C029616.2Cucumber (Gy14) v2cgybmedB050
MELO3C029616.2Cucumber (Gy14) v1cgymedB645
MELO3C029616.2Cucumber (Gy14) v1cgymedB646
MELO3C029616.2Cucurbita maxima (Rimu)cmamedB064
MELO3C029616.2Cucurbita maxima (Rimu)cmamedB114
MELO3C029616.2Cucurbita moschata (Rifu)cmomedB057
MELO3C029616.2Cucurbita moschata (Rifu)cmomedB107
MELO3C029616.2Cucurbita pepo (Zucchini)cpemedB397
MELO3C029616.2Wild cucumber (PI 183967)cpimedB038
MELO3C029616.2Wild cucumber (PI 183967)cpimedB056
MELO3C029616.2Cucumber (Chinese Long) v2cumedB035
MELO3C029616.2Cucumber (Chinese Long) v2cumedB055
MELO3C029616.2Bottle gourd (USVL1VR-Ls)lsimedB432
MELO3C029616.2Bottle gourd (USVL1VR-Ls)lsimedB420
MELO3C029616.2Watermelon (Charleston Gray)medwcgB230
MELO3C029616.2Watermelon (Charleston Gray)medwcgB239
MELO3C029616.2Watermelon (97103) v1medwmB254
MELO3C029616.2Silver-seed gourdcarmedB0906
MELO3C029616.2Cucumber (Chinese Long) v3cucmedB041
MELO3C029616.2Cucumber (Chinese Long) v3cucmedB058