MELO3C026975T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026975T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	30S ribosomal protein S8, putative
Location	chr7 : 6732434 .. 6733730 (-)
Sequence length	922

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTGTTTTCAATCTTTCATTACTTCTTCTGGTTGATGATTTAAGCGTACAAGTCAAATTTATACACCGTTCATAGATAAATTGGATTTTTTAAAAGAAGGGATTGATTGTGTTTTTTGTTAATTAATCTCATAGATTGTTTTGTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTAAAATGATATACACTTTTTTAGTTGTTCGTTTAACTTTTGCGGCATTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTACACGTTGTTTAGCAATTTCATATCCATCTCATTCGCTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAAAATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

mRNA sequence

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

Coding sequence (CDS)

ATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFLTCIMLKTCLYFIRIQTFIKKCHSHDCSLDSLC*

Homology

[Close]

BLAST of MELO3C026975T1 vs. Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 7.5e-49
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-49
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975T1 vs. Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3)

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-48
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-47
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 7.3e-44
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1  MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 61 IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. TrEMBL
Match: Q9SBL9_CITLA (Wrp15a OS=Citrullus lanatus GN=wrp15a PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975T1 vs. TrEMBL
Match: A0A0A0KZP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 85  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 144

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 145 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 187

[Close]

BLAST of MELO3C026975T1 vs. TrEMBL
Match: A0A0D2RM61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G136100 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975T1 vs. TrEMBL
Match: A0A0D2TC73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G230200 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975T1 vs. TrEMBL
Match: I1HT74_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g54450 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-47
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975T1 vs. TAIR10
Match: AT1G07770.1 (AT1G07770.1 ribosomal protein S15A)

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-50
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. TAIR10
Match: AT5G59850.1 (AT5G59850.1 Ribosomal protein S8 family protein)

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-50
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975T1 vs. TAIR10
Match: AT3G46040.1 (AT3G46040.1 ribosomal protein S15A D)

HSP 1 Score: 194.1 bits (492), Expect = 5.5e-50
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975T1 vs. TAIR10
Match: AT2G39590.1 (AT2G39590.1 Ribosomal protein S8 family protein)

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-45
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 104

[Close]

BLAST of MELO3C026975T1 vs. TAIR10
Match: AT4G29430.1 (AT4G29430.1 ribosomal protein S15A E)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20
Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 1


Query: 6  VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVEL 65
          +LNDAL+++ NAE+RGK  V ++P S V+  FL +M++ GYI  F+  D HR G+I V+L
Sbjct: 5  ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 66 NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           GR+N C  ++ R DV  KEIE +T R LP+RQ
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQ 97

[Close]

BLAST of MELO3C026975T1 vs. NCBI nr
Match: gi|923884421|ref|XP_013713851.1| (PREDICTED: 40S ribosomal protein S15a-like [Brassica napus])

HSP 1 Score: 199.1 bits (505), Expect = 4.9e-48
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFF 103
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVC +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCLY 102

[Close]

BLAST of MELO3C026975T1 vs. NCBI nr
Match: gi|449453772|ref|XP_004144630.1| (PREDICTED: 40S ribosomal protein S15a-1 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975T1 vs. NCBI nr
Match: gi|700199780|gb|KGN54938.1| (hypothetical protein Csa_4G608140 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 85  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 144

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 145 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 187

[Close]

BLAST of MELO3C026975T1 vs. NCBI nr
Match: gi|763752777|gb|KJB20165.1| (hypothetical protein B456_003G136100 [Gossypium raimondii])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975T1 vs. NCBI nr
Match: gi|763806390|gb|KJB73328.1| (hypothetical protein B456_011G230200 [Gossypium raimondii])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

The following BLAST results are available for this feature:

BLAST of MELO3C026975T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R15A1_ARATH	7.5e-49	96.94	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2	[more]
R15A4_ARATH	9.8e-49	92.23	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3	[more]
RS15A_BRANA	2.2e-48	95.92	40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3	[more]
RS15A_DAUCA	1.8e-47	94.90	40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3	[more]
R15A3_ARATH	7.3e-44	88.78	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2	[more]

BLAST of MELO3C026975T1 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9SBL9_CITLA	7.5e-48	96.12	Wrp15a OS=Citrullus lanatus GN=wrp15a PE=2 SV=1	[more]
A0A0A0KZP3_CUCSA	7.5e-48	96.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608140 PE=3 SV=1	[more]
A0A0D2RM61_GOSRA	1.3e-47	98.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G136100 PE=4 SV=1	[more]
A0A0D2TC73_GOSRA	1.3e-47	98.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G230200 PE=4 SV=1	[more]
I1HT74_BRADI	2.2e-47	97.98	Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g54450 PE=4 SV=1	[more]

BLAST of MELO3C026975T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07770.1	4.2e-50	96.94	ribosomal protein S15A	[more]
AT5G59850.1	4.2e-50	96.94	Ribosomal protein S8 family protein	[more]
AT3G46040.1	5.5e-50	92.23	ribosomal protein S15A D	[more]
AT2G39590.1	4.1e-45	88.78	Ribosomal protein S8 family protein	[more]
AT4G29430.1	1.6e-20	49.46	ribosomal protein S15A E	[more]

BLAST of MELO3C026975T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|923884421\|ref\|XP_013713851.1\|	4.9e-48	94.12	PREDICTED: 40S ribosomal protein S15a-like [Brassica napus]	[more]
gi\|449453772\|ref\|XP_004144630.1\|	1.1e-47	96.12	PREDICTED: 40S ribosomal protein S15a-1 [Cucumis sativus]	[more]
gi\|700199780\|gb\|KGN54938.1\|	1.1e-47	96.12	hypothetical protein Csa_4G608140 [Cucumis sativus]	[more]
gi\|763752777\|gb\|KJB20165.1\|	1.8e-47	98.99	hypothetical protein B456_003G136100 [Gossypium raimondii]	[more]
gi\|763806390\|gb\|KJB73328.1\|	1.8e-47	98.99	hypothetical protein B456_011G230200 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000630	Ribosomal_S8

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026975	MELO3C026975	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C026975T1	MELO3C026975T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C026975T1.cds2	MELO3C026975T1.cds2	CDS
MELO3C026975T1.cds1	MELO3C026975T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 1..98 score: 6.3
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 7..87 score: 3.0
IPR000630	Ribosomal protein S8	unknown	SSF56047	Ribosomal protein S8	coord: 4..99 score: 2.22
None	No IPR available	GENE3D	G3DSA:3.30.1370.30		coord: 1..68 score: 1.8
None	No IPR available	GENE3D	G3DSA:3.30.1490.10		coord: 70..101 score: 6.
None	No IPR available	PANTHER	PTHR11758:SF16	RIBOSOMAL PROTEIN S15A	coord: 1..98 score: 6.3