MELO3C026975 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026975
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	30S ribosomal protein S8, putative
Location	chr7 : 6732434 .. 6733730 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTGTTTTCAATCTTTCATTACTTCTTCTGGTTGATGATTTAAGCGTACAAGTCAAATTTATACACCGTTCATAGATAAATTGGATTTTTTAAAAGAAGGGATTGATTGTGTTTTTTGTTAATTAATCTCATAGATTGTTTTGTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTAAAATGATATACACTTTTTTAGTTGTTCGTTTAACTTTTGCGGCATTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTACACGTTGTTTAGCAATTTCATATCCATCTCATTCGCTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAAAATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTACTTGTATTATGCTTAAGACCTGTTTGTATTTTATTCGAATCCAAACTTTTATAAAAAAATGTCATTCGCACGATTGCAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

mRNA sequence

TCTCTCTTTTCACTCAGCCGTTGAAGAACCAGAAGCCCTAATTCCCATTCGAAGTCTGCAACTTTAGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTATGAGATTGGTTTTACTTCTTTTTGGTATTTTCGCACTTTTGAACTTAGATGGGAAGAAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGGTTACAGGAGATTTGGCCTGCATTCTTTTTGAAGACTTTCATGAGCCAATTTTCTTAGTCTATGAGTTTTATTTGTTTGCTATACTGAAACTGGAATTGCCATAGTTATCAAGCTTTGGAATTCATTGCAATTTTTTCAGACAGCAATTATCCTTCCCTCGCCCATCAATTTGTGTGTTCTATATCTCATGTTTATGTATGATTCCTTTTCCAGCTTTTGATG

Coding sequence (CDS)

ATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAACTGAATGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATTGTGTTGACTACGTCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY*

Homology

[Close]

BLAST of MELO3C026975 vs. Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 7.5e-49
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-49
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975 vs. Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3)

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-48
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-47
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 7.3e-44
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1  MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 61 IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. TrEMBL
Match: Q9SBL9_CITLA (Wrp15a OS=Citrullus lanatus GN=wrp15a PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975 vs. TrEMBL
Match: A0A0A0KZP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-48
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 85  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 144

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 145 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 187

[Close]

BLAST of MELO3C026975 vs. TrEMBL
Match: A0A0D2RM61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G136100 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975 vs. TrEMBL
Match: A0A0D2TC73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G230200 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975 vs. TrEMBL
Match: I1HT74_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g54450 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-47
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975 vs. TAIR10
Match: AT1G07770.1 (AT1G07770.1 ribosomal protein S15A)

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-50
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. TAIR10
Match: AT5G59850.1 (AT5G59850.1 Ribosomal protein S8 family protein)

HSP 1 Score: 194.5 bits (493), Expect = 4.2e-50
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 1


Query: 1  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
          MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1  MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
          IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 98

[Close]

BLAST of MELO3C026975 vs. TAIR10
Match: AT3G46040.1 (AT3G46040.1 ribosomal protein S15A D)

HSP 1 Score: 194.1 bits (492), Expect = 5.5e-50
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975 vs. TAIR10
Match: AT2G39590.1 (AT2G39590.1 Ribosomal protein S8 family protein)

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-45
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQ
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQ 104

[Close]

BLAST of MELO3C026975 vs. TAIR10
Match: AT4G29430.1 (AT4G29430.1 ribosomal protein S15A E)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20
Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 1


Query: 6  VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVEL 65
          +LNDAL+++ NAE+RGK  V ++P S V+  FL +M++ GYI  F+  D HR G+I V+L
Sbjct: 5  ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 66 NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ 99
           GR+N C  ++ R DV  KEIE +T R LP+RQ
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQ 97

[Close]

BLAST of MELO3C026975 vs. NCBI nr
Match: gi|923884421|ref|XP_013713851.1| (PREDICTED: 40S ribosomal protein S15a-like [Brassica napus])

HSP 1 Score: 199.1 bits (505), Expect = 4.9e-48
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFF 103
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVC +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCLY 102

[Close]

BLAST of MELO3C026975 vs. NCBI nr
Match: gi|449453772|ref|XP_004144630.1| (PREDICTED: 40S ribosomal protein S15a-1 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 103

[Close]

BLAST of MELO3C026975 vs. NCBI nr
Match: gi|700199780|gb|KGN54938.1| (hypothetical protein Csa_4G608140 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 85  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 144

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQVCFFL 104
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQ  F +
Sbjct: 145 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIV 187

[Close]

BLAST of MELO3C026975 vs. NCBI nr
Match: gi|763752777|gb|KJB20165.1| (hypothetical protein B456_003G136100 [Gossypium raimondii])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

[Close]

BLAST of MELO3C026975 vs. NCBI nr
Match: gi|763806390|gb|KJB73328.1| (hypothetical protein B456_011G230200 [Gossypium raimondii])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 100
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQV 99

The following BLAST results are available for this feature:

BLAST of MELO3C026975 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R15A1_ARATH	7.5e-49	96.94	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2	[more]
R15A4_ARATH	9.8e-49	92.23	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3	[more]
RS15A_BRANA	2.2e-48	95.92	40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3	[more]
RS15A_DAUCA	1.8e-47	94.90	40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3	[more]
R15A3_ARATH	7.3e-44	88.78	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2	[more]

BLAST of MELO3C026975 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9SBL9_CITLA	7.5e-48	96.12	Wrp15a OS=Citrullus lanatus GN=wrp15a PE=2 SV=1	[more]
A0A0A0KZP3_CUCSA	7.5e-48	96.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608140 PE=3 SV=1	[more]
A0A0D2RM61_GOSRA	1.3e-47	98.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G136100 PE=4 SV=1	[more]
A0A0D2TC73_GOSRA	1.3e-47	98.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G230200 PE=4 SV=1	[more]
I1HT74_BRADI	2.2e-47	97.98	Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g54450 PE=4 SV=1	[more]

BLAST of MELO3C026975 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07770.1	4.2e-50	96.94	ribosomal protein S15A	[more]
AT5G59850.1	4.2e-50	96.94	Ribosomal protein S8 family protein	[more]
AT3G46040.1	5.5e-50	92.23	ribosomal protein S15A D	[more]
AT2G39590.1	4.1e-45	88.78	Ribosomal protein S8 family protein	[more]
AT4G29430.1	1.6e-20	49.46	ribosomal protein S15A E	[more]

BLAST of MELO3C026975 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|923884421\|ref\|XP_013713851.1\|	4.9e-48	94.12	PREDICTED: 40S ribosomal protein S15a-like [Brassica napus]	[more]
gi\|449453772\|ref\|XP_004144630.1\|	1.1e-47	96.12	PREDICTED: 40S ribosomal protein S15a-1 [Cucumis sativus]	[more]
gi\|700199780\|gb\|KGN54938.1\|	1.1e-47	96.12	hypothetical protein Csa_4G608140 [Cucumis sativus]	[more]
gi\|763752777\|gb\|KJB20165.1\|	1.8e-47	98.99	hypothetical protein B456_003G136100 [Gossypium raimondii]	[more]
gi\|763806390\|gb\|KJB73328.1\|	1.8e-47	98.99	hypothetical protein B456_011G230200 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000630	Ribosomal_S8

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006412	translation
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54794	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026975T2	MELO3C026975T2	mRNA
MELO3C026975T1	MELO3C026975T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54794	MU54794	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026975	Csa4G608140	Cucumber (Chinese Long) v2	cumeB269
MELO3C026975	Bhi09G003004	Wax gourd	mewgoB606
MELO3C026975	CSPI04G21650	Wild cucumber (PI 183967)	cpimeB299
MELO3C026975	Cucsa.058820	Cucumber (Gy14) v1	cgymeB044
MELO3C026975	CsGy4G020170	Cucumber (Gy14) v2	cgybmeB260
MELO3C026975	CsaV3_4G031980	Cucumber (Chinese Long) v3	cucmeB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026975	Watermelon (97103) v2	mewmbB472
MELO3C026975	Wax gourd	mewgoB596
MELO3C026975	Cucumber (Gy14) v1	cgymeB041
MELO3C026975	Cucurbita maxima (Rimu)	cmameB036
MELO3C026975	Cucurbita maxima (Rimu)	cmameB433
MELO3C026975	Cucurbita maxima (Rimu)	cmameB448
MELO3C026975	Cucurbita moschata (Rifu)	cmomeB025
MELO3C026975	Cucurbita moschata (Rifu)	cmomeB423
MELO3C026975	Cucurbita moschata (Rifu)	cmomeB439
MELO3C026975	Wild cucumber (PI 183967)	cpimeB317
MELO3C026975	Watermelon (Charleston Gray)	mewcgB462
MELO3C026975	Watermelon (97103) v1	mewmB544
MELO3C026975	Cucurbita pepo (Zucchini)	cpemeB539
MELO3C026975	Cucurbita pepo (Zucchini)	cpemeB535
MELO3C026975	Cucurbita pepo (Zucchini)	cpemeB730
MELO3C026975	Silver-seed gourd	carmeB0318
MELO3C026975	Silver-seed gourd	carmeB1012