MELO3C025754T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C025754T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionFormyltetrahydrofolate deformylase
Locationchr11 : 25701941 .. 25702632 (-)
Sequence length602
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCAAGTAGAGTTAATCAAACACCGGAGGCCCTCAAAAAGCCCCAAAACCAAAACCCACATTCTCTACACTCTTTATTCTCTCTCCTCTTGTTCTTCCATTCTTTTCTCCTCCATCAAAGAACTAAAACCAATTCGTCATCATCATCATCTTCTTCTTCTTCTTCTTGTCAGAGAAATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGTATTTCCCCTTAACCCTAACCAACTTTTCTCTTTCTCTTAATACATAATACACTCCTATTATCACGTTGCTCTGTTTTTTGAGTTGCAGGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAGATTAGGAAACAGAGTATCCATGATCTGGGTAATTTGGATTTGATATATTTTGTTAATTTTGATGTGGGTTTGTTTTTTATGTATTGTTCTTGTTTGATATGAAATGGGATTTGTTTTCTTTCATGTACTATGTTAAGAGATTGGGAAAAAATTTGACTGGTTATGAATGGGAATCTAGAAAAATTAAA

mRNA sequence

ACCCAAGTAGAGTTAATCAAACACCGGAGGCCCTCAAAAAGCCCCAAAACCAAAACCCACATTCTCTACACTCTTTATTCTCTCTCCTCTTGTTCTTCCATTCTTTTCTCCTCCATCAAAGAACTAAAACCAATTCGTCATCATCATCATCTTCTTCTTCTTCTTCTTGTCAGAGAAATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAGATTAGGAAACAGAGTATCCATGATCTGGGTAATTTGGATTTGATATATTTTGTTAATTTTGATGTGGGTTTGTTTTTTATGTATTGTTCTTGTTTGATATGAAATGGGATTTGTTTTCTTTCATGTACTATGTTAAGAGATTGGGAAAAAATTTGACTGGTTATGAATGGGAATCTAGAAAAATTAAA

Coding sequence (CDS)

ATGCAGTCGAAGATTGGATCTCAAGGTCTTCCTCTCTGTATTTCAGCCTTCACTCTCTCAAATCATTCCCTCTCTACTCAGATAGCAGATCATGATCGAAGAAGGGAAGCCATGAAAACGAGAACGCAAAGATCAAACAACATGAAATACAGGTATTTGGAAGCGATTAGAGAAGGAGATCTTGAGGATTTCGTCAATGAAACCGACTTCATGATTTGTGCTGCAAAAGCTGCTTAG

Protein sequence

MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGDLEDFVNETDFMICAAKAA*
Homology
[Close]
BLAST of MELO3C025754T1 vs. TrEMBL
Match: A0A0A0KEP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G290900 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.4e-32
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 1 

Query: 1  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 60
          MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRT+RS+NMK+R LEAIREGD
Sbjct: 1  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTKRSSNMKHRLLEAIREGD 60

Query: 61 LEDFVNETDFMICAAKAA 79
          LEDFVNE D MICAAKAA
Sbjct: 61 LEDFVNENDLMICAAKAA 78

[Close]
BLAST of MELO3C025754T1 vs. NCBI nr
Match: gi|700192105|gb|KGN47309.1| (hypothetical protein Csa_6G290900 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-32
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 1 

Query: 1  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTQRSNNMKYRYLEAIREGD 60
          MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRT+RS+NMK+R LEAIREGD
Sbjct: 1  MQSKIGSQGLPLCISAFTLSNHSLSTQIADHDRRREAMKTRTKRSSNMKHRLLEAIREGD 60

Query: 61 LEDFVNETDFMICAAKAA 79
          LEDFVNE D MICAAKAA
Sbjct: 61 LEDFVNENDLMICAAKAA 78

The following BLAST results are available for this feature:
BLAST of MELO3C025754T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEP9_CUCSA3.4e-3292.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G290900 PE=4 SV=1[more]
BLAST of MELO3C025754T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192105|gb|KGN47309.1|4.8e-3292.31hypothetical protein Csa_6G290900 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C025754MELO3C025754gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C025754T1MELO3C025754T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C025754T1.cds2MELO3C025754T1.cds2CDS
MELO3C025754T1.cds1MELO3C025754T1.cds1CDS