MELO3C024712.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATAAGAGTTTCGATTCAACAATTTGATAAGGATGTGACTCAAGAATACATCCATTGGTATAGTAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGTCATCTGGTACATATTTAAATATTGTATAATTACTTAAATTATTTATTCAATTAAATATTTCTAATTTTTTTACAATTTACAGGGAGATCGAACAATGCAAGACTTCGTGATGTAGCAGATGATCTACAACAATTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGTCGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATCAATCAAATAAATGTAATTTGGTTATTAAAAATTATTTTAATTTACATTTAATTTTTTAATTACGCGTCATTATTAAAAACGGTTTATCTAATTATTTAATTAGTTAGAAATATTCATATAAATTTTGAATTTTAATATCGAAGAGTAATAACAAAATTTAAATTTGTTTGACAAAAAATATTAAAATGAATACA ATGGCAATAAGAGTTTCGATTCAACAATTTGATAAGGATGTGACTCAAGAATACATCCATTGGTATAGTAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGGAGATCGAACAATGCAAGACTTCGTGATGTAGCAGATGATCTACAACAATTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGTCGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATCAATCAAATAAATGTAATTTGGTTATTAAAAATTATTTTAATTTACATTTAATTTTTTAATTACGCGTCATTATTAAAAACGGTTTATCTAATTATTTAATTAGTTAGAAATATTCATATAAATTTTGAATTTTAATATCGAAGAGTAATAACAAAATTTAAATTTGTTTGACAAAAAATATTAAAATGAATACA ATGGCAATAAGAGTTTCGATTCAACAATTTGATAAGGATGTGACTCAAGAATACATCCATTGGTATAGTAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGGAGATCGAACAATGCAAGACTTCGTGATGTAGCAGATGATCTACAACAATTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGTCGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA MAIRVSIQQFDKDVTQEYIHWYSNITRLYITRPGAAVGRSNNARLRDVADDLQQFLDICNNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRNRRRPGCGTH
BLAST of MELO3C024712.2.1 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]) HSP 1 Score: 140.2 bits (352), Expect = 8.5e-30 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. NCBI nr
Match: XP_016900498.1 (PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]) HSP 1 Score: 131.7 bits (330), Expect = 3.0e-27 Identity = 66/105 (62.86%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. NCBI nr
Match: XP_008463092.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]) HSP 1 Score: 88.2 bits (217), Expect = 3.8e-14 Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. NCBI nr
Match: KGN45851.1 (hypothetical protein Csa_6G014710 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13 Identity = 46/73 (63.01%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. NCBI nr
Match: XP_008461670.1 (PREDICTED: CASP-like protein 4C1 isoform X1 [Cucumis melo]) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. TrEMBL
Match: tr|A0A1S3BLK4|A0A1S3BLK4_CUCME (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.6e-30 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. TrEMBL
Match: tr|A0A1S4DWZ9|A0A1S4DWZ9_CUCME (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 66/105 (62.86%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. TrEMBL
Match: tr|A0A1S3CIU3|A0A1S3CIU3_CUCME (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC103501325 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.5e-14 Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. TrEMBL
Match: tr|A0A0A0KDI9|A0A0A0KDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014710 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13 Identity = 46/73 (63.01%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of MELO3C024712.2.1 vs. TrEMBL
Match: tr|A0A1S3CF98|A0A1S3CF98_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 8.4e-10 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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