MELO3C024076.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C024076.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 8682673 .. 8682855 (-)
Sequence length183
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

mRNA sequence

ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

Coding sequence (CDS)

ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

Protein sequence

MEQLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIVKVANY
Homology
[Close]
BLAST of MELO3C024076.2.1 vs. NCBI nr
Match: KGN44467.1 (hypothetical protein Csa_7G298830 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-05
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 22 EIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIV 56
          +IQP EIEKLKGSEMD+DI+VESN GYCERNQ V
Sbjct: 4  KIQPHEIEKLKGSEMDQDINVESNYGYCERNQTV 37

[Close]
BLAST of MELO3C024076.2.1 vs. TrEMBL
Match: tr|A0A0A0K807|A0A0A0K807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-05
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 22 EIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIV 56
          +IQP EIEKLKGSEMD+DI+VESN GYCERNQ V
Sbjct: 4  KIQPHEIEKLKGSEMDQDINVESNYGYCERNQTV 37

The following BLAST results are available for this feature:
BLAST of MELO3C024076.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44467.12.0e-0582.35hypothetical protein Csa_7G298830 [Cucumis sativus][more]
BLAST of MELO3C024076.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C024076.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C024076.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K807|A0A0A0K807_CUCSA1.3e-0582.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C024076.2MELO3C024076.2gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C024076.2.1.exon.1MELO3C024076.2.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C024076.2.1.CDS.1MELO3C024076.2.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C024076.2.1MELO3C024076.2.1-proteinpolypeptide