MELO3C024076.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024076.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 8682673 .. 8682855 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

mRNA sequence

ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

Coding sequence (CDS)

ATGGAGCAGTTGAAGAAGAAAAATGCCGAGACTGAAAGACTTCATAAGATAGAGTATGTAGCAGAAATTCAACCAGATGAGATAGAGAAGCTGAAGGGCAGTGAGATGGATGAAGATATTGATGTAGAATCCAACGATGGCTACTGTGAAAGGAATCAGATAGTAAAAGTGGCAAACTACTGA

Protein sequence

MEQLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIVKVANY
Homology
[Close]
BLAST of MELO3C024076.2 vs. NCBI nr
Match: KGN44467.1 (hypothetical protein Csa_7G298830 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-05
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 22 EIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIV 56
          +IQP EIEKLKGSEMD+DI+VESN GYCERNQ V
Sbjct: 4  KIQPHEIEKLKGSEMDQDINVESNYGYCERNQTV 37

[Close]
BLAST of MELO3C024076.2 vs. TrEMBL
Match: tr|A0A0A0K807|A0A0A0K807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-05
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 22 EIQPDEIEKLKGSEMDEDIDVESNDGYCERNQIV 56
          +IQP EIEKLKGSEMD+DI+VESN GYCERNQ V
Sbjct: 4  KIQPHEIEKLKGSEMDQDINVESNYGYCERNQTV 37

The following BLAST results are available for this feature:
BLAST of MELO3C024076.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44467.12.0e-0582.35hypothetical protein Csa_7G298830 [Cucumis sativus][more]
BLAST of MELO3C024076.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C024076.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C024076.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K807|A0A0A0K807_CUCSA1.3e-0582.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024076.2.1MELO3C024076.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C024076.2Lsi02G019710Bottle gourd (USVL1VR-Ls)lsimedB198
MELO3C024076.2Cla016397Watermelon (97103) v1medwmB204
MELO3C024076.2ClCG09G010170Watermelon (Charleston Gray)medwcgB176
MELO3C024076.2Bhi09G001289Wax gourdmedwgoB259
MELO3C024076.2CsaV3_7G024560Cucumber (Chinese Long) v3cucmedB529
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024076.2Cucumber (Gy14) v2cgybmedB458
MELO3C024076.2Cucumber (Gy14) v1cgymedB083
MELO3C024076.2Cucurbita maxima (Rimu)cmamedB456
MELO3C024076.2Cucurbita moschata (Rifu)cmomedB444
MELO3C024076.2Cucurbita pepo (Zucchini)cpemedB597
MELO3C024076.2Cucurbita pepo (Zucchini)cpemedB848
MELO3C024076.2Wild cucumber (PI 183967)cpimedB514
MELO3C024076.2Cucumber (Chinese Long) v2cumedB503
MELO3C024076.2Silver-seed gourdcarmedB0288
MELO3C024076.2Watermelon (97103) v2medwmbB216