MELO3C024060T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024060T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Patatin
Location	chr1 : 7912945 .. 7913513 (+)
Sequence length	240

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGGTAATAACAACATTTGGATTTTGATTTTTTTTGTTTTTTTTTTTATAAAAACCTAAGGTTGAAGTTGACTTTAAAATATTGAATAATGTTATAAGGATCTGAGATCACATTGAACTATTTCTACAAATGAATTATTCATCTAATAATAAGAACTAAACTAATGTATATACAAATATATTATATGTGGCACCGAAGTCTATAAAATTCAAATGATCGATGACATGACAGGTTACTTAGGATAGTTACAGCTTTCTCATTAATCGTCCCTTTAAGTTTAATTTGTATATGTAAAATTTTGATTATTGGTTATTTGATACACTTTTGGCTAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

mRNA sequence

ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

Coding sequence (CDS)

ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

Protein sequence

MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKKNNHK*

Homology

[Close]

BLAST of MELO3C024060T1 vs. Swiss-Prot
Match: PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.4e-17
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILSIDG GIRG+I  VIL FLE  LQKLDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAPKK 76
          TAP K
Sbjct: 76 TAPNK 80

[Close]

BLAST of MELO3C024060T1 vs. Swiss-Prot
Match: PLP2_ORYSI (Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          +LSIDG G+RGII   IL FLE  LQKLDG DARIA YFDV+AGTST GL+  MLTAP +
Sbjct: 23 VLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAMLTAPNE 82

Query: 76 NN 78
          NN
Sbjct: 83 NN 84

[Close]

BLAST of MELO3C024060T1 vs. Swiss-Prot
Match: PLP2_ORYSJ (Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          +LSIDG G+RGII   IL FLE  LQKLDG DARIA YFDV+AGTST GL+  MLTAP +
Sbjct: 23 VLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAMLTAPNE 82

Query: 76 NN 78
          NN
Sbjct: 83 NN 84

[Close]

BLAST of MELO3C024060T1 vs. Swiss-Prot
Match: PLP1_ARATH (Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-15
Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILS+DG G+RGII  VIL FLE  LQ+LDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAP 74
          T P
Sbjct: 76 TVP 78

[Close]

BLAST of MELO3C024060T1 vs. Swiss-Prot
Match: PLP5_ARATH (Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-15
Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          ILS+DG G+RGII  VIL +LE  LQ+LDGE  R+A YFDVIAGTST GLV  MLTAP +
Sbjct: 21 ILSLDGGGVRGIIAGVILAYLEKQLQELDGEHVRVADYFDVIAGTSTGGLVTAMLTAPDE 80

Query: 76 N 77
          N
Sbjct: 81 N 81

[Close]

BLAST of MELO3C024060T1 vs. TrEMBL
Match: O23784_CUCSA (Patatin (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.9e-17
Identity = 50/71 (70.42%), Postives = 54/71 (76.06%), Query Frame = 1


Query: 7  DSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLV 66
          D  KG+   ILSIDG GIRGII  +IL FLE  LQ+LDG D RIA YFDVIAGTST GLV
Sbjct: 17 DFAKGKMITILSIDGGGIRGIIPSIILAFLESKLQELDGPDVRIADYFDVIAGTSTGGLV 76

Query: 67 ATMLTAPKKNN 78
           +MLTAP KNN
Sbjct: 77 TSMLTAPDKNN 87

[Close]

BLAST of MELO3C024060T1 vs. TrEMBL
Match: D7SVZ4_VITVI (Patatin OS=Vitis vinifera GN=VIT_07s0031g00850 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-16
Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 10 KGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATM 69
          +G    +LSIDG GI+GII  +IL FLE  LQKLDGEDAR+A YFDV++GTST GL+ATM
Sbjct: 10 QGNLITVLSIDGGGIKGIIPGIILDFLESELQKLDGEDARLADYFDVVSGTSTGGLIATM 69

Query: 70 LTAPKKNN 78
          LTAP +NN
Sbjct: 70 LTAPNENN 77

[Close]

BLAST of MELO3C024060T1 vs. TrEMBL
Match: V7CRT1_PHAVU (Patatin OS=Phaseolus vulgaris GN=PHAVU_001G020100g PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-16
Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 7  DSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLV 66
          +S +G    +LSIDG GIRGII  VIL FLE  LQKLDG+DAR+A YFDVIAGTST GLV
Sbjct: 14 NSDEGHMVTLLSIDGGGIRGIIPGVILGFLESELQKLDGDDARLADYFDVIAGTSTGGLV 73

Query: 67 ATMLTAPKKNN 78
            MLTAP +NN
Sbjct: 74 TAMLTAPNENN 84

[Close]

BLAST of MELO3C024060T1 vs. TrEMBL
Match: W9S7S9_9ROSA (Patatin OS=Morus notabilis GN=L484_003958 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-16
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 1


Query: 8  SGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVA 67
          S KG    +LSIDG GIRGII  + L FLEF LQ+LDG +ARIA YFD+IAGTST GLV 
Sbjct: 6  SAKGNMFTVLSIDGGGIRGIIPAIHLAFLEFKLQELDGPNARIADYFDIIAGTSTGGLVT 65

Query: 68 TMLTAPKKNN 78
          TMLTAP K+N
Sbjct: 66 TMLTAPNKDN 75

[Close]

BLAST of MELO3C024060T1 vs. TrEMBL
Match: A0A061FB01_THECC (Patatin OS=Theobroma cacao GN=TCM_033888 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-16
Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          GE   +LSIDG GIRGII  VIL FLE  LQKLDGE ARIA YFDV+AGTST GL+ TML
Sbjct: 14 GELITVLSIDGGGIRGIIPGVILSFLESELQKLDGEQARIADYFDVVAGTSTGGLLTTML 73

Query: 71 TAPKKNN 78
          TAP + N
Sbjct: 74 TAPNEKN 80

[Close]

BLAST of MELO3C024060T1 vs. TAIR10
Match: AT2G26560.1 (AT2G26560.1 phospholipase A 2A)

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-18
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILSIDG GIRG+I  VIL FLE  LQKLDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAPKK 76
          TAP K
Sbjct: 76 TAPNK 80

[Close]

BLAST of MELO3C024060T1 vs. TAIR10
Match: AT4G37070.2 (AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 8.1e-17
Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILS+DG G+RGII  VIL FLE  LQ+LDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAP 74
          T P
Sbjct: 76 TVP 78

[Close]

BLAST of MELO3C024060T1 vs. TAIR10
Match: AT4G37050.1 (AT4G37050.1 PATATIN-like protein 4)

HSP 1 Score: 77.8 bits (190), Expect = 3.4e-15
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G+   ILSIDG GIRGII   IL +LE  LQ+LDGE+AR+  YFDVI+GTST GL+  ML
Sbjct: 32 GQLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAML 91

Query: 71 TA 73
          TA
Sbjct: 92 TA 93

[Close]

BLAST of MELO3C024060T1 vs. TAIR10
Match: AT5G43590.1 (AT5G43590.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDA-RIAYYFDVIAGTSTSGLVATM 70
          G    ILS+DG G+RGII  VIL  LE  LQ++D +++ R+A YFDVIAGTST GL+  M
Sbjct: 11 GNLVTILSLDGGGVRGIIGGVILANLEKHLQEIDNDESVRLADYFDVIAGTSTGGLMTAM 70

Query: 71 LTAP 74
          LTAP
Sbjct: 71 LTAP 74

[Close]

BLAST of MELO3C024060T1 vs. TAIR10
Match: AT4G37060.2 (AT4G37060.2 PATATIN-like protein 5)

HSP 1 Score: 67.0 bits (162), Expect = 6.0e-12
Identity = 42/92 (45.65%), Postives = 46/92 (50.00%), Query Frame = 1


Query: 16  ILSIDGSGIRGIILRVILKFLEFVLQ-------------------------------KLD 75
           ILS+DG G+RGII  VIL +LE  LQ                               +LD
Sbjct: 11  ILSLDGGGVRGIIAGVILAYLEKQLQVYIYINFSRMQVTKIVDTYDRIITRHANFVVELD 70

Query: 76  GEDARIAYYFDVIAGTSTSGLVATMLTAPKKN 77
           GE  R+A YFDVIAGTST GLV  MLTAP +N
Sbjct: 71  GEHVRVADYFDVIAGTSTGGLVTAMLTAPDEN 102

[Close]

BLAST of MELO3C024060T1 vs. NCBI nr
Match: gi|778674215|ref|XP_011650160.1| (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-28
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 1


Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          M +SELDSGKGEYR ILSIDG GIRGII  VILKFLE VLQKLDGEDARIA YFDVIAGT
Sbjct: 1  MPDSELDSGKGEYRTILSIDGGGIRGIIPGVILKFLESVLQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNNHK 80
          ST GLVATMLTAP KNNHK
Sbjct: 61 STGGLVATMLTAPNKNNHK 79

[Close]

BLAST of MELO3C024060T1 vs. NCBI nr
Match: gi|659116052|ref|XP_008457875.1| (PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 1


Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MANSELDSGKGEYR ILSIDG GIRGII  VILKFLEFVLQKLDGE+AR+A YFDVIAGT
Sbjct: 1  MANSELDSGKGEYRTILSIDGGGIRGIIPGVILKFLEFVLQKLDGENARLADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNNH 79
          ST GLVA+ML AP K+NH
Sbjct: 61 STGGLVASMLAAPDKDNH 78

[Close]

BLAST of MELO3C024060T1 vs. NCBI nr
Match: gi|659116050|ref|XP_008457874.1| (PREDICTED: LOW QUALITY PROTEIN: patatin-like protein 2 [Cucumis melo])

HSP 1 Score: 115.2 bits (287), Expect = 5.4e-23
Identity = 62/77 (80.52%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MA SELDSGKG+ R ILSIDG GIRGII  VIL FLE  LQKLDGEDARIA YFDVIAGT
Sbjct: 1  MAVSELDSGKGKLRTILSIDGGGIRGIIPGVILAFLESELQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNN 78
          ST GLV +MLTAP KNN
Sbjct: 61 STGGLVVSMLTAPNKNN 77

[Close]

BLAST of MELO3C024060T1 vs. NCBI nr
Match: gi|778670102|ref|XP_011649367.1| (PREDICTED: patatin-like protein 3 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-22
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 1


Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MA SELDSGKGE R ILSIDG GIRGII  VIL FLE  LQKLDGEDARIA YFDVIAGT
Sbjct: 1  MAVSELDSGKGELRTILSIDGGGIRGIIPGVILAFLESELQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKN 77
          ST GLV +MLTAP+ N
Sbjct: 61 STGGLVVSMLTAPENN 76

[Close]

BLAST of MELO3C024060T1 vs. NCBI nr
Match: gi|449460684|ref|XP_004148075.1| (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-22
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 1


Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G+YR ILSIDG GIRGII  VIL+FLE VLQKLDGEDARIA YFDVIAGTST GLVATML
Sbjct: 20 GKYRTILSIDGGGIRGIIPGVILQFLEIVLQKLDGEDARIADYFDVIAGTSTGGLVATML 79

Query: 71 TAPKKNNH 79
          TAP KNNH
Sbjct: 80 TAPDKNNH 87

The following BLAST results are available for this feature:

BLAST of MELO3C024060T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLP2_ARATH	4.4e-17	72.31	Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1	[more]
PLP2_ORYSI	5.8e-17	70.97	Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1	[more]
PLP2_ORYSJ	5.8e-17	70.97	Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1	[more]
PLP1_ARATH	1.4e-15	68.25	Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2	[more]
PLP5_ARATH	1.4e-15	68.85	Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2	[more]

BLAST of MELO3C024060T1 vs. TrEMBL


Match Name	E-value	Identity	Description
O23784_CUCSA	6.9e-17	70.42	Patatin (Fragment) OS=Cucumis sativus PE=2 SV=1	[more]
D7SVZ4_VITVI	1.2e-16	67.65	Patatin OS=Vitis vinifera GN=VIT_07s0031g00850 PE=3 SV=1	[more]
V7CRT1_PHAVU	1.5e-16	69.01	Patatin OS=Phaseolus vulgaris GN=PHAVU_001G020100g PE=3 SV=1	[more]
W9S7S9_9ROSA	1.5e-16	68.57	Patatin OS=Morus notabilis GN=L484_003958 PE=3 SV=1	[more]
A0A061FB01_THECC	3.4e-16	71.64	Patatin OS=Theobroma cacao GN=TCM_033888 PE=3 SV=1	[more]

BLAST of MELO3C024060T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26560.1	2.5e-18	72.31	phospholipase A 2A	[more]
AT4G37070.2	8.1e-17	68.25	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei...	[more]
AT4G37050.1	3.4e-15	64.52	PATATIN-like protein 4	[more]
AT5G43590.1	2.1e-12	59.38	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei...	[more]
AT4G37060.2	6.0e-12	45.65	PATATIN-like protein 5	[more]

BLAST of MELO3C024060T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674215\|ref\|XP_011650160.1\|	4.3e-28	87.34	PREDICTED: patatin-like protein 2 [Cucumis sativus]	[more]
gi\|659116052\|ref\|XP_008457875.1\|	4.7e-27	84.62	PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo]	[more]
gi\|659116050\|ref\|XP_008457874.1\|	5.4e-23	80.52	PREDICTED: LOW QUALITY PROTEIN: patatin-like protein 2 [Cucumis melo]	[more]
gi\|778670102\|ref\|XP_011649367.1\|	2.7e-22	80.26	PREDICTED: patatin-like protein 3 [Cucumis sativus]	[more]
gi\|449460684\|ref\|XP_004148075.1\|	3.5e-22	85.29	PREDICTED: patatin-like protein 2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002641	PNPLA_dom
IPR016035	Acyl_Trfase/lysoPLipase

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process
GO:0008152	metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024060	MELO3C024060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C024060T1	MELO3C024060T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024060T1.cds1	MELO3C024060T1.cds1	CDS
MELO3C024060T1.cds2	MELO3C024060T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002641	Patatin/Phospholipase A2-related	PFAM	PF01734	Patatin	coord: 17..72 score: 2.
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	unknown	SSF52151	FabD/lysophospholipase-like	coord: 13..73 score: 2.14
None	No IPR available	unknown	Coil	Coil	coord: 78..79 scor
None	No IPR available	GENE3D	G3DSA:3.40.1090.10		coord: 10..77 score: 5.8
None	No IPR available	PANTHER	PTHR32176	FAMILY NOT NAMED	coord: 11..77 score: 1.8