MELO3C024060 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024060
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPatatin
Locationchr1 : 7912945 .. 7913513 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGGTAATAACAACATTTGGATTTTGATTTTTTTTGTTTTTTTTTTTATAAAAACCTAAGGTTGAAGTTGACTTTAAAATATTGAATAATGTTATAAGGATCTGAGATCACATTGAACTATTTCTACAAATGAATTATTCATCTAATAATAAGAACTAAACTAATGTATATACAAATATATTATATGTGGCACCGAAGTCTATAAAATTCAAATGATCGATGACATGACAGGTTACTTAGGATAGTTACAGCTTTCTCATTAATCGTCCCTTTAAGTTTAATTTGTATATGTAAAATTTTGATTATTGGTTATTTGATACACTTTTGGCTAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

mRNA sequence

ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

Coding sequence (CDS)

ATGGCTAATTCTGAGCTTGATTCTGGGAAGGGAGAATACAGAAAAATTTTGAGCATCGATGGAAGTGGCATTAGAGGCATTATTCTCAGAGTTATTCTAAAATTTCTCGAGTTTGTGCTTCAGAAATTGGATGGAGAAGATGCAAGAATAGCATATTACTTTGATGTAATTGCTGGTACAAGTACAAGTGGTTTGGTTGCCACGATGCTTACAGCTCCTAAAAAGAACAATCATAAATAA

Protein sequence

MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKKNNHK*
Homology
[Close]
BLAST of MELO3C024060 vs. Swiss-Prot
Match: PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.4e-17
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILSIDG GIRG+I  VIL FLE  LQKLDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAPKK 76
          TAP K
Sbjct: 76 TAPNK 80

[Close]
BLAST of MELO3C024060 vs. Swiss-Prot
Match: PLP2_ORYSI (Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          +LSIDG G+RGII   IL FLE  LQKLDG DARIA YFDV+AGTST GL+  MLTAP +
Sbjct: 23 VLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAMLTAPNE 82

Query: 76 NN 78
          NN
Sbjct: 83 NN 84

[Close]
BLAST of MELO3C024060 vs. Swiss-Prot
Match: PLP2_ORYSJ (Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          +LSIDG G+RGII   IL FLE  LQKLDG DARIA YFDV+AGTST GL+  MLTAP +
Sbjct: 23 VLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAMLTAPNE 82

Query: 76 NN 78
          NN
Sbjct: 83 NN 84

[Close]
BLAST of MELO3C024060 vs. Swiss-Prot
Match: PLP1_ARATH (Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-15
Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILS+DG G+RGII  VIL FLE  LQ+LDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAP 74
          T P
Sbjct: 76 TVP 78

[Close]
BLAST of MELO3C024060 vs. Swiss-Prot
Match: PLP5_ARATH (Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-15
Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 1 

Query: 16 ILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATMLTAPKK 75
          ILS+DG G+RGII  VIL +LE  LQ+LDGE  R+A YFDVIAGTST GLV  MLTAP +
Sbjct: 21 ILSLDGGGVRGIIAGVILAYLEKQLQELDGEHVRVADYFDVIAGTSTGGLVTAMLTAPDE 80

Query: 76 N 77
          N
Sbjct: 81 N 81

[Close]
BLAST of MELO3C024060 vs. TrEMBL
Match: O23784_CUCSA (Patatin (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.9e-17
Identity = 50/71 (70.42%), Postives = 54/71 (76.06%), Query Frame = 1 

Query: 7  DSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLV 66
          D  KG+   ILSIDG GIRGII  +IL FLE  LQ+LDG D RIA YFDVIAGTST GLV
Sbjct: 17 DFAKGKMITILSIDGGGIRGIIPSIILAFLESKLQELDGPDVRIADYFDVIAGTSTGGLV 76

Query: 67 ATMLTAPKKNN 78
           +MLTAP KNN
Sbjct: 77 TSMLTAPDKNN 87

[Close]
BLAST of MELO3C024060 vs. TrEMBL
Match: D7SVZ4_VITVI (Patatin OS=Vitis vinifera GN=VIT_07s0031g00850 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-16
Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 1 

Query: 10 KGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATM 69
          +G    +LSIDG GI+GII  +IL FLE  LQKLDGEDAR+A YFDV++GTST GL+ATM
Sbjct: 10 QGNLITVLSIDGGGIKGIIPGIILDFLESELQKLDGEDARLADYFDVVSGTSTGGLIATM 69

Query: 70 LTAPKKNN 78
          LTAP +NN
Sbjct: 70 LTAPNENN 77

[Close]
BLAST of MELO3C024060 vs. TrEMBL
Match: V7CRT1_PHAVU (Patatin OS=Phaseolus vulgaris GN=PHAVU_001G020100g PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-16
Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 1 

Query: 7  DSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLV 66
          +S +G    +LSIDG GIRGII  VIL FLE  LQKLDG+DAR+A YFDVIAGTST GLV
Sbjct: 14 NSDEGHMVTLLSIDGGGIRGIIPGVILGFLESELQKLDGDDARLADYFDVIAGTSTGGLV 73

Query: 67 ATMLTAPKKNN 78
            MLTAP +NN
Sbjct: 74 TAMLTAPNENN 84

[Close]
BLAST of MELO3C024060 vs. TrEMBL
Match: W9S7S9_9ROSA (Patatin OS=Morus notabilis GN=L484_003958 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-16
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 1 

Query: 8  SGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVA 67
          S KG    +LSIDG GIRGII  + L FLEF LQ+LDG +ARIA YFD+IAGTST GLV 
Sbjct: 6  SAKGNMFTVLSIDGGGIRGIIPAIHLAFLEFKLQELDGPNARIADYFDIIAGTSTGGLVT 65

Query: 68 TMLTAPKKNN 78
          TMLTAP K+N
Sbjct: 66 TMLTAPNKDN 75

[Close]
BLAST of MELO3C024060 vs. TrEMBL
Match: A0A061FB01_THECC (Patatin OS=Theobroma cacao GN=TCM_033888 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-16
Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          GE   +LSIDG GIRGII  VIL FLE  LQKLDGE ARIA YFDV+AGTST GL+ TML
Sbjct: 14 GELITVLSIDGGGIRGIIPGVILSFLESELQKLDGEQARIADYFDVVAGTSTGGLLTTML 73

Query: 71 TAPKKNN 78
          TAP + N
Sbjct: 74 TAPNEKN 80

[Close]
BLAST of MELO3C024060 vs. TAIR10
Match: AT2G26560.1 (AT2G26560.1 phospholipase A 2A)

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-18
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILSIDG GIRG+I  VIL FLE  LQKLDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAPKK 76
          TAP K
Sbjct: 76 TAPNK 80

[Close]
BLAST of MELO3C024060 vs. TAIR10
Match: AT4G37070.2 (AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 8.1e-17
Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G    ILS+DG G+RGII  VIL FLE  LQ+LDGE+AR+A YFDVIAGTST GLV  ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71 TAP 74
          T P
Sbjct: 76 TVP 78

[Close]
BLAST of MELO3C024060 vs. TAIR10
Match: AT4G37050.1 (AT4G37050.1 PATATIN-like protein 4)

HSP 1 Score: 77.8 bits (190), Expect = 3.4e-15
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G+   ILSIDG GIRGII   IL +LE  LQ+LDGE+AR+  YFDVI+GTST GL+  ML
Sbjct: 32 GQLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAML 91

Query: 71 TA 73
          TA
Sbjct: 92 TA 93

[Close]
BLAST of MELO3C024060 vs. TAIR10
Match: AT5G43590.1 (AT5G43590.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDA-RIAYYFDVIAGTSTSGLVATM 70
          G    ILS+DG G+RGII  VIL  LE  LQ++D +++ R+A YFDVIAGTST GL+  M
Sbjct: 11 GNLVTILSLDGGGVRGIIGGVILANLEKHLQEIDNDESVRLADYFDVIAGTSTGGLMTAM 70

Query: 71 LTAP 74
          LTAP
Sbjct: 71 LTAP 74

[Close]
BLAST of MELO3C024060 vs. TAIR10
Match: AT4G37060.2 (AT4G37060.2 PATATIN-like protein 5)

HSP 1 Score: 67.0 bits (162), Expect = 6.0e-12
Identity = 42/92 (45.65%), Postives = 46/92 (50.00%), Query Frame = 1 

Query: 16  ILSIDGSGIRGIILRVILKFLEFVLQ-------------------------------KLD 75
           ILS+DG G+RGII  VIL +LE  LQ                               +LD
Sbjct: 11  ILSLDGGGVRGIIAGVILAYLEKQLQVYIYINFSRMQVTKIVDTYDRIITRHANFVVELD 70

Query: 76  GEDARIAYYFDVIAGTSTSGLVATMLTAPKKN 77
           GE  R+A YFDVIAGTST GLV  MLTAP +N
Sbjct: 71  GEHVRVADYFDVIAGTSTGGLVTAMLTAPDEN 102

[Close]
BLAST of MELO3C024060 vs. NCBI nr
Match: gi|778674215|ref|XP_011650160.1| (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-28
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          M +SELDSGKGEYR ILSIDG GIRGII  VILKFLE VLQKLDGEDARIA YFDVIAGT
Sbjct: 1  MPDSELDSGKGEYRTILSIDGGGIRGIIPGVILKFLESVLQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNNHK 80
          ST GLVATMLTAP KNNHK
Sbjct: 61 STGGLVATMLTAPNKNNHK 79

[Close]
BLAST of MELO3C024060 vs. NCBI nr
Match: gi|659116052|ref|XP_008457875.1| (PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 1 

Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MANSELDSGKGEYR ILSIDG GIRGII  VILKFLEFVLQKLDGE+AR+A YFDVIAGT
Sbjct: 1  MANSELDSGKGEYRTILSIDGGGIRGIIPGVILKFLEFVLQKLDGENARLADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNNH 79
          ST GLVA+ML AP K+NH
Sbjct: 61 STGGLVASMLAAPDKDNH 78

[Close]
BLAST of MELO3C024060 vs. NCBI nr
Match: gi|659116050|ref|XP_008457874.1| (PREDICTED: LOW QUALITY PROTEIN: patatin-like protein 2 [Cucumis melo])

HSP 1 Score: 115.2 bits (287), Expect = 5.4e-23
Identity = 62/77 (80.52%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MA SELDSGKG+ R ILSIDG GIRGII  VIL FLE  LQKLDGEDARIA YFDVIAGT
Sbjct: 1  MAVSELDSGKGKLRTILSIDGGGIRGIIPGVILAFLESELQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKNN 78
          ST GLV +MLTAP KNN
Sbjct: 61 STGGLVVSMLTAPNKNN 77

[Close]
BLAST of MELO3C024060 vs. NCBI nr
Match: gi|778670102|ref|XP_011649367.1| (PREDICTED: patatin-like protein 3 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-22
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 1 

Query: 1  MANSELDSGKGEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGT 60
          MA SELDSGKGE R ILSIDG GIRGII  VIL FLE  LQKLDGEDARIA YFDVIAGT
Sbjct: 1  MAVSELDSGKGELRTILSIDGGGIRGIIPGVILAFLESELQKLDGEDARIADYFDVIAGT 60

Query: 61 STSGLVATMLTAPKKN 77
          ST GLV +MLTAP+ N
Sbjct: 61 STGGLVVSMLTAPENN 76

[Close]
BLAST of MELO3C024060 vs. NCBI nr
Match: gi|449460684|ref|XP_004148075.1| (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-22
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 11 GEYRKILSIDGSGIRGIILRVILKFLEFVLQKLDGEDARIAYYFDVIAGTSTSGLVATML 70
          G+YR ILSIDG GIRGII  VIL+FLE VLQKLDGEDARIA YFDVIAGTST GLVATML
Sbjct: 20 GKYRTILSIDGGGIRGIIPGVILQFLEIVLQKLDGEDARIADYFDVIAGTSTGGLVATML 79

Query: 71 TAPKKNNH 79
          TAP KNNH
Sbjct: 80 TAPDKNNH 87

The following BLAST results are available for this feature:
BLAST of MELO3C024060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLP2_ARATH4.4e-1772.31Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1[more]
PLP2_ORYSI5.8e-1770.97Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1[more]
PLP2_ORYSJ5.8e-1770.97Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1[more]
PLP1_ARATH1.4e-1568.25Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2[more]
PLP5_ARATH1.4e-1568.85Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2[more]
BLAST of MELO3C024060 vs. TrEMBL
Match NameE-valueIdentityDescription
O23784_CUCSA6.9e-1770.42Patatin (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
D7SVZ4_VITVI1.2e-1667.65Patatin OS=Vitis vinifera GN=VIT_07s0031g00850 PE=3 SV=1[more]
V7CRT1_PHAVU1.5e-1669.01Patatin OS=Phaseolus vulgaris GN=PHAVU_001G020100g PE=3 SV=1[more]
W9S7S9_9ROSA1.5e-1668.57Patatin OS=Morus notabilis GN=L484_003958 PE=3 SV=1[more]
A0A061FB01_THECC3.4e-1671.64Patatin OS=Theobroma cacao GN=TCM_033888 PE=3 SV=1[more]
BLAST of MELO3C024060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G26560.12.5e-1872.31 phospholipase A 2A[more]
AT4G37070.28.1e-1768.25 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei... [more]
AT4G37050.13.4e-1564.52 PATATIN-like protein 4[more]
AT5G43590.12.1e-1259.38 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei... [more]
AT4G37060.26.0e-1245.65 PATATIN-like protein 5[more]
BLAST of MELO3C024060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778674215|ref|XP_011650160.1|4.3e-2887.34PREDICTED: patatin-like protein 2 [Cucumis sativus][more]
gi|659116052|ref|XP_008457875.1|4.7e-2784.62PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo][more]
gi|659116050|ref|XP_008457874.1|5.4e-2380.52PREDICTED: LOW QUALITY PROTEIN: patatin-like protein 2 [Cucumis melo][more]
gi|778670102|ref|XP_011649367.1|2.7e-2280.26PREDICTED: patatin-like protein 3 [Cucumis sativus][more]
gi|449460684|ref|XP_004148075.1|3.5e-2285.29PREDICTED: patatin-like protein 2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR016035Acyl_Trfase/lysoPLipase
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49016melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024060T1MELO3C024060T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49016MU49016transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002641Patatin/Phospholipase A2-relatedPFAMPF01734Patatincoord: 17..72
score: 2.
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseunknownSSF52151FabD/lysophospholipase-likecoord: 13..73
score: 2.14
NoneNo IPR availableunknownCoilCoilcoord: 78..79
scor
NoneNo IPR availableGENE3DG3DSA:3.40.1090.10coord: 10..77
score: 5.8
NoneNo IPR availablePANTHERPTHR32176FAMILY NOT NAMEDcoord: 11..77
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024060Cucumber (Chinese Long) v3cucmeB540
MELO3C024060Watermelon (97103) v2mewmbB230
MELO3C024060Wax gourdmewgoB258
MELO3C024060Cucumber (Gy14) v1cgymeB085
MELO3C024060Cucurbita maxima (Rimu)cmameB019
MELO3C024060Cucurbita maxima (Rimu)cmameB396
MELO3C024060Cucurbita moschata (Rifu)cmomeB008
MELO3C024060Cucurbita moschata (Rifu)cmomeB387
MELO3C024060Wild cucumber (PI 183967)cpimeB528
MELO3C024060Cucumber (Chinese Long) v2cumeB525
MELO3C024060Watermelon (Charleston Gray)mewcgB181
MELO3C024060Watermelon (97103) v1mewmB204
MELO3C024060Cucurbita pepo (Zucchini)cpemeB505
MELO3C024060Cucurbita pepo (Zucchini)cpemeB714
MELO3C024060Bottle gourd (USVL1VR-Ls)lsimeB189
MELO3C024060Cucumber (Gy14) v2cgybmeB460
MELO3C024060Silver-seed gourdcarmeB0276