MELO3C023967T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C023967T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDihydropyrimidine dehydrogenase [NADP(+)]
Locationchr4 : 24173734 .. 24173943 (+)
Sequence length210
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCAATGAGATTCCCTCATCTTGTTGTTGTTGCTGTTGTTTTGGTTCTTGCTATGGTGAGCATAGAAATGAAGAAAGTTGATAGCATTGAGGATGAGTTAGCTCCAATGCCTGCTATGGCTGCTGGCTTAGCATTTCCTTCTTCTGTTGCTTTTGGTTTCAATTTTGTTGTCCCTCTTTTGCTTTGTGTTTTTGGTGTCTAA

mRNA sequence

ATGGCTTCTTCAATGAGATTCCCTCATCTTGTTGTTGTTGCTGTTGTTTTGGTTCTTGCTATGGTGAGCATAGAAATGAAGAAAGTTGATAGCATTGAGGATGAGTTAGCTCCAATGCCTGCTATGGCTGCTGGCTTAGCATTTCCTTCTTCTGTTGCTTTTGGTTTCAATTTTGTTGTCCCTCTTTTGCTTTGTGTTTTTGGTGTCTAA

Coding sequence (CDS)

ATGGCTTCTTCAATGAGATTCCCTCATCTTGTTGTTGTTGCTGTTGTTTTGGTTCTTGCTATGGTGAGCATAGAAATGAAGAAAGTTGATAGCATTGAGGATGAGTTAGCTCCAATGCCTGCTATGGCTGCTGGCTTAGCATTTCCTTCTTCTGTTGCTTTTGGTTTCAATTTTGTTGTCCCTCTTTTGCTTTGTGTTTTTGGTGTCTAA

Protein sequence

MASSMRFPHLVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGLAFPSSVAFGFNFVVPLLLCVFGV*
Homology
[Close]
BLAST of MELO3C023967T1 vs. TrEMBL
Match: A0A0A0LCE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G697920 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-27
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 1 

Query: 1  MASSMRFPHLVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGLAFPSSVAFGFNFVV 60
          MASSMRFPH VVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAG AFPSSVA GFNFVV
Sbjct: 1  MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60

Query: 61 PLLLCVFGV 70
          PLLLCVFGV
Sbjct: 61 PLLLCVFGV 69

[Close]
BLAST of MELO3C023967T1 vs. NCBI nr
Match: gi|700203466|gb|KGN58599.1| (hypothetical protein Csa_3G697920 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 4.1e-27
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 1 

Query: 1  MASSMRFPHLVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGLAFPSSVAFGFNFVV 60
          MASSMRFPH VVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAG AFPSSVA GFNFVV
Sbjct: 1  MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60

Query: 61 PLLLCVFGV 70
          PLLLCVFGV
Sbjct: 61 PLLLCVFGV 69

The following BLAST results are available for this feature:
BLAST of MELO3C023967T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCE5_CUCSA2.9e-2795.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G697920 PE=4 SV=1[more]
BLAST of MELO3C023967T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203466|gb|KGN58599.1|4.1e-2795.65hypothetical protein Csa_3G697920 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C023967MELO3C023967gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C023967T1MELO3C023967T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C023967T1.cds1MELO3C023967T1.cds1CDS