MELO3C023238T2 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C023238T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative gamma-secretase subunit PEN-2
Locationchr11 : 459922 .. 466498 (-)
Sequence length1236
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAAGGGAGAAGGAACAGTTTAGCTTTAAGGATTCTGTTTCTCAAAGTCATTCGAACTCCTCTTGCAATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTGTGAGTTTTAACTTCTACTTTAAATTATTTCATAAATTTACACTTATACCTGATCTTTAAACCACGATAAACTTGAAATTTTCATACTTATTGCTGTTCGAAGAAAAATATGATTCGGATCCAGATCCTGTTGTTGGGTTTATCATACCTCAGTATTCATGAGCATCAACGATTATTCTTTGTTGTTGTTCTGTTTTTTTCGTTATATTTTAACTCCATTCTGCTTCACTAGTTATGTTTTAATGTGTGGAAGGCCAAAACTCAAATTATTTTGTACAGAAATACATGATGCTATTGTAATGTTGATATTTGTGTTAAAAAAACTGACGCCCATCGGTTAATCCTTGTTCATTTGTTGTTTTTTTCGTAGGCTTGGTATCTAGGTACTAGGCGTGTTTATTTGTGCAAATATCCTACCTTTCTAGTTATTCCTTCTTTTTGTTGTTTGCTTCATCGTGGCGACTACATTATTCTTTTGAGTTTGATAGCTTTTATAATAATACGTTAAGCGATGATACCTTGGTACTCCTCACAATTTGATGAATAAAATGGATAAAAGATTCGTAATCATGTTCAAATTCATTAAATTGAGCCTTAAGACTTTGTTGTTCTTTTCCTCAGGCTTGGTCTGTAGATACTAGGAGTTCTAACCTGATTATTTGTGCAAATACCCTGACTGTTTTATTCTACAAAGCATATACATATATATATTGGGTGCATCAAATGGGGATCGGAGGAACTTGAACCTTTGACCCCAAGTAAGGTAGCACACTGTAATTACTACTAACCTAGGCTCACTTTAATCAAAGTACTAATGCTTTTGAAGGAAGATAAAAATTATTGGCTCTTACGCTTCAAGTAGACAACATTTGCCAATAAGCTTTCGGTTGTGTGTTGAAGTTCTAATTCAATTGAGCTTTCCTATGCATATCCCATTACCTAGGACACCCAAGTATGCAGCAATCTGAAGTTTTGGCCTTAGATTATTTGTCATGGTGGTCTTTCAACTTCATTTGGCATATCCTCTTTTTGGGAATTATGCATATGAACTTTGTTATGCATCTATCTTATCCACCTAGAGCTGTGTGTACACGTATATATGTACAAATTTAATCATAAACCAACTAGGCAAATTAGGATGGCTATGCATACAAGAAGGGTGGGTCTTGTGTGTTTCCATGCATATGGATGAGAAACCCTCAAAAGGGGACAATCCATGGTTGTTTACTATACATTGAATGCATTATCTCTGTCTTCACATATCTCCTTTGTCGTACGAGCACTGGTTGTTTGTAGTGGAGATACTCTCCAAAACCCTAGGTTCAAGCCCATGGAAAATAAGAGTGGCTTGTTTTTGTGAGTGTGTGTTGTATGTAATTTAGCTAATAAGGGTGGCCTACCTTGGAGCGTATGCCTATATATCCATGGATTTAATTCAAAATTGACTAGGGGAGAAAAGTTTGGTTGTGTGTGTAGCAAGGTTGGTTTTTTTATACGTGTATTAGGGGTCATTAAACTTAAAGTTATTATGTGCTTGTTCTTACTTTCAGTTTAAATGATCCAATTCAACTTTCAATTTTTTATTTTTATTTTTATGTCTGTACATCCATGCTACACAGAACCTGCTAGTGATAATTATTAAGGAGAATTGTTTTATAGTGTGATTTATAGTTCACTGTAACAATGACTATTATAATTTTAATACAACAATGAGTTTGTTTGAGATCAATACTCTATATGCTTGAAAGCTTTTCAGACGGTCACTCTGATGCTGGAGTTTTCAAGATCAATAACTTTGGAGGATACTCCTTTTTCAAGACCATTTATCATTGGTAACACAGATAGAATTCTATATTTATTTTCAACAAATCGTAGAAGTTCCACATGTCTTAGAAAGATGAGTTGTTTCTTTGGGTTTGTTTACTATGAAAAGTTTGAGATGAAGTCCAGGATTTTGTATCATCTCTCTCTGAATGGGTGTCCTAGGTAATTGCAATAGTTGAAACTTTTAGGATGAGATCGCAGCCATAGGACGACGATCCACTGAACTTTAGCATGAGGAGATGGTACCGAGGACTCCCTCGTTCAAATTCTAATAATAGGTGTTACAACTTCCGAAGGAAGTCGGTCAACATATTTTCAGTCATTACTTATCGGTCTTTAATCAAGAGTACCGAAGAATTAATGAGGGTATAACTAGGCCTAGGAGTGAAATTGAGAACTTGGGAGTTTCCTGTTTTCCTAGCTTTTGTAGATGGTGTTCCTTACATAAAGATATTTACGATTGATTCTCATCTTTTATTCAAATAACTTGGTAGTCTTTTCATTTTTTGTGATCTCCTTGATTTTTTCTGGGAGAGGGTCAGATATCTTGTCGTTCTACAAAGTTCCCATAACTTTAGGCTATCATAATTTTTCTCTAGAAATTTTGGGTATGTATCTCTGTTTATAGTTATTCCTAGAACCACGTTATGGTAGAGTATTCATTTCTATTTAATAGACATTTACTTGAACTGTTTGACTGTTTTTCACATTAACTACTTTTAGGCTCAGTACAATTACCTAACGATTTGAAATTATCGTTTCTTTAGATATTGTTTAATGATTGGAAATTGTTGTTTTTGTTTAACAATTTGAAATTGTTGTTTCTTTAGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCTCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAAGTTTGAATCGGGTCTCCCTTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGCCGTGCTCTTTTCTGGTTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGTATGATTGTATACTGTTACACTTCTTGTTATGGATATATTAGGATAACTAGTATGGTTGGTAAAAGGGTATTTTAGTAAATAGTTAGGTTTTTTTTATAGAACTTTTAGTTGTAAACAAGAGGGAGTGTGGTTGAGAGAATTTTTTTGTGGGATTTTCTTTCCAGAGGGCTATTAGGGAGAGAGTAGCTCTCTTGAAAGGCTAGATTATCTTGTTACTTTTCCTACTTTTCCTATTGATATTATAACAAATTTTCATATATTTCTATGATAGTGTTCTTTGTTGGTTTAGTTGTTCTTGAGTATTCTTGTTAAGGAGTATCTTATAAAATACCTCTACGATGGGACAATTAGGAGAATATGTGTATATATAGTTCTTAAGAATATTATTGTATTCCCAATTTGAGACATGTGCCATAGTTTGATTCATGCTATCAGATATCATTGAAACAAGTTTGTTTTCAAATGCTAGTTTTGGATAATTGCCTCCATCAGATTAAGCTGGGATTCACTTAATTAACTTCGGTTAGTAGAAATACTAATCTCTTGACATTTTTGTGGTGTCATCAATATCCAAATGGGAAAGCTAATCCCTAAAATAGAATAAGATGGAACCAAAAAACTTGACAGAAATAGGGAAGGATGGTGGATGGGTAGGGTTGGTGGGGGATTTGATTCTTGAATGATGTTTGCTTGGTTAGGTTTTCTTTATTACTATTCTTCTTTTCAATCTGGTTTTTCAATCTCAGCACATAGGATTTAGGTCGAGTTTTGAAAGTAAAGGATCTGTTACCTCCATAGAGCACCAAACTAATTTTTTTTTTTTACTTCTTAATCAATCATTATTTGAACAACAAAATCATTGTGTTACTGTGAGGTTAGTTTTGTTATTGACTTTTTCAATTAAAAGAAAATAGTGTTAGACGTTTGCCACATAATGATAATGATGATTTCTAATTTTAATCACATTAGATATGAATGGATATTAACAGTTGGCACATAGGGTTTTGCCTAGTTCAAAATCGATAGTCATTGCTGAATTTAGAAAAGAAAAATGTTCAATGTTGATAATAAATAAAATGATTTGGTTAATTTCTGAATCTTTTCTCTTGTGGATTAAGTTATTGGATATGGAAAAAAAGTGCTTTTTTATAAATGTGGAAAGATGAGGATTGCTGAATCAGTCCGTACAAAACCAACTTCTATCATTAAAATGATTCTGATTCTGAGTGATTTTGTCAAGGGAGCAGTAGGTTATATATATATATATATATATATCTTTTATTTTGTTAAAGGAAAACAATTATATCGGAGAAAACACTATACGTTGAAATTGTTATTTTTATCTCTCTATATTAAACTTATTGCATAGGGAGAAATCTCTATATCATTTTCAGGATGCTAAGGATATTGACCAAGATTTGAAATTTGATTGGCTCATTATTTATCAACTAATTCCCTTGTGATTTGAATGCATTTAATCAAATTCTATTGTTTCTGATTATTTATTTATTTTTGGTTTGCGTAAAATCTAAGATTTAAAAAGAAAAGTAAAAGATAAGAAGAGTTATCAAATGAATAAGACATACATACATACATATATATATATATATATATATCACAGATTTGATTGAATATAATTTGTGGGTACTTTGGATAATTACTTATTTTTATCTTGTTGTGTAACAAAAACTTCTCAACAAAACCAAAAAGTTGTTGTTGTTATTATTATTTATTATTATTTATTATTATTAATTAAAGGAAATAATTGAAAAGAACAAAACAAAAAAAGAATTCCTTTTGATGGCATATGACAAACTGTGTAACTGCACAGCCAGAAATGTATTAAGAGGGAATTTGGATTGTTTCTCAAAATCTCTAATGAACCAACAAATCAATTGCCTTTCCCCTGCACAGGTTGGTGAGATCACAATAACAAATAAAAATTTAACTGTCCACAATTAAGACATACCCCATTTTGTTATTTCTGATGTAATAAGTTGTTCTGTTTTGGCACTAACTTCACTAAATTAAGCTTCCAAATTTCATTATGCTGATTAAGCTATAGGTGGGGCTTCTCTTTGGGTTTTGTGCACTTTATTGCCAGCTTCAAATGGAAACATATACACACGTATATATGGTTGAAATGATAAGTTTAGCATGTGGTTCGATAGAAAGTTAGAGTTTAGTTTCGGTCATGGTCTTAAAAATACGATTTTAGTTTATATGATTTGATAAAGCCTTCATAAATCCTTTTATAATAGACTATTCATGAAAATTTTATCAAATCATATAGATTAAATTATAACTTTCTCTGAATTATAAGTATGATATTCATAATTTAACCTATATTTATCTTTAGAAAATAGGTTACGTTGATACTAAAATGCTACCAAAAATTCTCACATCATGACCTTCATGGGTTTTAAATGATAAATATAATTTGTAATTTTGGAGAAGAGATTACCAAGAACAAGGTGTTTTGGGATGACGAGTTGCACATGTGTTATATTTGTCGTAAATACTTTGATACTAATTAATTAGTTTAGAGCAGCAGAGGGGGCAAGCTTTTAATTCACGAGGAAAGAAGATGAAATTATTACTTTGTGTCAAACTATGATATGTATTTATAAGAACAGATAAGCCTAGGATTTCCCTAATCTCTTTTTATGAACTTTTTTCAAGAAGGCAAGGGCACAATGAGGTCAACTTGGAGGGAGAGTGTGACTCGAGCCAGCTCTTCGAGGGTGTAGATCAACCTCAACCTCAGAGAAGGCGGACCTTAGTCTCGAAGGTCGAGGCCGAGAGGTGGGCAATTGGATTGAATGACCAAGTTGCTTTCCATGGGTTCTCTTGGATTTTGTAAGGGTTTTTCGGACCCGTCTCTTGAAAATATTTTGAATCTTTCTTTTGAACACATTTCGAATTTGCGGAGAATTTGATTATCAATGTTATTTTTCTCTAGGTTCAAAAAATTACGGAAAACACGTGTTAAATTATAAATTAATACCTCAAATTTC

mRNA sequence

AGAAAAAGGGAGAAGGAACAGTTTAGCTTTAAGGATTCTGTTTCTCAAAGTCATTCGAACTCCTCTTGCAATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCTCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAAGTTTGAATCGGGTCTCCCTTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGCCGTGCTCTTTTCTGGTTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGCAAGGGCACAATGAGGTCAACTTGGAGGGAGAGTGTGACTCGAGCCAGCTCTTCGAGGGTGTAGATCAACCTCAACCTCAGAGAAGGCGGACCTTAGTCTCGAAGGTCGAGGCCGAGAGGTGGGCAATTGGATTGAATGACCAAGTTGCTTTCCATGGGTTCTCTTGGATTTTGTAAGGGTTTTTCGGACCCGTCTCTTGAAAATATTTTGAATCTTTCTTTTGAACACATTTCGAATTTGCGGAGAATTTGATTATCAATGTTATTTTTCTCTAGGTTCAAAAAATTACGGAAAACACGTGTTAAATTATAAATTAATACCTCAAATTTC

Coding sequence (CDS)

ATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAG

Protein sequence

METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS*
Homology
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BLAST of MELO3C023238T2 vs. Swiss-Prot
Match: PEN2_ARATH (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana GN=At5g09310 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-47
Identity = 94/130 (72.31%), Postives = 108/130 (83.08%), Query Frame = 1 

Query: 4   SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVN 63
           + NPN N N NP +TI S   V WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VN
Sbjct: 16  NRNPNPNPNPNPLSTIISSAQV-WPTIDGPLGLTEEASVDYARRFYKFGFALLPWLWFVN 75

Query: 64  CFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 123
           CFYFWPVLR SR+FP+IR Y+V SAIGF V  A++S+WALTFSIGGE+LFGP++DKLVMY
Sbjct: 76  CFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSIGGEQLFGPLYDKLVMY 135

Query: 124 NLADKLGLTG 132
           N+AD+LGL+G
Sbjct: 136 NVADRLGLSG 144

[Close]
BLAST of MELO3C023238T2 vs. Swiss-Prot
Match: PEN2_BOVIN (Gamma-secretase subunit PEN-2 OS=Bos taurus GN=PSENEN PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 35  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIG 94
           +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+G
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFIVPAYTEQS--QIKGYVWRSAVG 65

Query: 95  FGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 122
           F + + ++S+W   F I     + P W  L  Y
Sbjct: 66  FFLWVIVLSTWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of MELO3C023238T2 vs. Swiss-Prot
Match: PEN2_HUMAN (Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=PSENEN PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 35  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIG 94
           +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+G
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQS--QIKGYVWRSAVG 65

Query: 95  FGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 122
           F   + +++SW   F I     + P W  L  Y
Sbjct: 66  FLFWVIVLTSWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of MELO3C023238T2 vs. Swiss-Prot
Match: PEN2_MOUSE (Gamma-secretase subunit PEN-2 OS=Mus musculus GN=Psenen PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-07
Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 35  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIG 94
           +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+G
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLAPAYTEQS--QIKGYVWRSAVG 65

Query: 95  FGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 122
           F   + I+++W   F I     + P W  L  Y
Sbjct: 66  FLFWVIILATWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of MELO3C023238T2 vs. Swiss-Prot
Match: PEN2_RAT (Gamma-secretase subunit PEN-2 OS=Rattus norvegicus GN=Psenen PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-07
Identity = 32/93 (34.41%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 35  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIG 94
           +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+G
Sbjct: 6   VSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFKEAFFAPAYTEQS--QIKGYVWRSAVG 65

Query: 95  FGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 122
           F   + ++++W   F I     + P W  L  Y
Sbjct: 66  FLFWVIVLTTWITIFQI-----YRPRWGALGDY 91

[Close]
BLAST of MELO3C023238T2 vs. TrEMBL
Match: A0A0A0LK38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302290 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-68
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METLQNPNANTNSNPNTISSPIRVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVM 120
           VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVM
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVM 120

Query: 121 YNLADKLGLTGWS 134
           YNLADK+GLTGWS
Sbjct: 121 YNLADKVGLTGWS 133

[Close]
BLAST of MELO3C023238T2 vs. TrEMBL
Match: A0A0B2PPM2_GLYSO (Putative gamma-secretase subunit PEN-2 OS=Glycine soja GN=glysoja_011887 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-53
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 1 

Query: 6   NPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFY 65
           NPN N N N N++ S +PV WPTIDG LGLSEEESV YARRFYKFGFALLP LWAVNCFY
Sbjct: 10  NPNPNPNRN-NSVASSVPV-WPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFY 69

Query: 66  FWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLA 125
           FWP LR S SFPRIRPY+VGSAIGF V   ++SSWALTF+IGGERLFGPVWD+LVMYNLA
Sbjct: 70  FWPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLA 129

Query: 126 DKLGLTGWS 134
           D+LGLTGWS
Sbjct: 130 DRLGLTGWS 136

[Close]
BLAST of MELO3C023238T2 vs. TrEMBL
Match: I1KBJ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G153700 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-53
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 1 

Query: 6   NPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFY 65
           NPN N N N N++ S +PV WPTIDG LGLSEEESV YARRFYKFGFALLP LWAVNCFY
Sbjct: 10  NPNPNPNRN-NSVASSVPV-WPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFY 69

Query: 66  FWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLA 125
           FWP LR S SFPRIRPY+VGSAIGF V   ++SSWALTF+IGGERLFGPVWD+LVMYNLA
Sbjct: 70  FWPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLA 129

Query: 126 DKLGLTGWS 134
           D+LGLTGWS
Sbjct: 130 DRLGLTGWS 136

[Close]
BLAST of MELO3C023238T2 vs. TrEMBL
Match: I1JY18_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G212600 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.9e-53
Identity = 103/132 (78.03%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 6   NPNANTNSNP---NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVN 65
           NPN N N NP   N++ S +P LWPTIDG LGLSEEESV YARRFY FGFALLP LWAVN
Sbjct: 19  NPNPNPNPNPHRNNSVASSMP-LWPTIDGPLGLSEEESVGYARRFYTFGFALLPLLWAVN 78

Query: 66  CFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 125
           CFYFWPVLR S SFPRIRPY+VGSAIGF V   ++SSW+LTF+IGGERLFGPVWD+LVMY
Sbjct: 79  CFYFWPVLRHSHSFPRIRPYVVGSAIGFAVCATLLSSWSLTFAIGGERLFGPVWDQLVMY 138

Query: 126 NLADKLGLTGWS 134
           NLAD+LGLTGWS
Sbjct: 139 NLADRLGLTGWS 149

[Close]
BLAST of MELO3C023238T2 vs. TrEMBL
Match: A0A151SSX1_CAJCA (Putative gamma-secretase subunit PEN-2 OS=Cajanus cajan GN=KK1_004232 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.9e-53
Identity = 102/134 (76.12%), Postives = 114/134 (85.07%), Query Frame = 1 

Query: 1   METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           ME S + N N N   N++ S +P LWPTIDG LGLSEEESVSYARRFY FGFALLP LWA
Sbjct: 1   MEASESNNPNPNPIRNSLASSVP-LWPTIDGPLGLSEEESVSYARRFYNFGFALLPLLWA 60

Query: 61  VNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLV 120
           VNCFYFWPVLR S SFPRIRPY++GSA+GF V   ++SSWALTF+IGGERLFGPVWD+LV
Sbjct: 61  VNCFYFWPVLRHSHSFPRIRPYVLGSAVGFAVFATLLSSWALTFAIGGERLFGPVWDQLV 120

Query: 121 MYNLADKLGLTGWS 134
           MYNLAD+LGLTGWS
Sbjct: 121 MYNLADRLGLTGWS 133

[Close]
BLAST of MELO3C023238T2 vs. TAIR10
Match: AT5G09310.1 (AT5G09310.1 Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379))

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-49
Identity = 94/130 (72.31%), Postives = 108/130 (83.08%), Query Frame = 1 

Query: 4   SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVN 63
           + NPN N N NP +TI S   V WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VN
Sbjct: 16  NRNPNPNPNPNPLSTIISSAQV-WPTIDGPLGLTEEASVDYARRFYKFGFALLPWLWFVN 75

Query: 64  CFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 123
           CFYFWPVLR SR+FP+IR Y+V SAIGF V  A++S+WALTFSIGGE+LFGP++DKLVMY
Sbjct: 76  CFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSIGGEQLFGPLYDKLVMY 135

Query: 124 NLADKLGLTG 132
           N+AD+LGL+G
Sbjct: 136 NVADRLGLSG 144

[Close]
BLAST of MELO3C023238T2 vs. NCBI nr
Match: gi|778670219|ref|XP_011649406.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-68
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METLQNPNANTNSNPNTISSPIRVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVM 120
           VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVM
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVM 120

Query: 121 YNLADKLGLTGWS 134
           YNLADK+GLTGWS
Sbjct: 121 YNLADKVGLTGWS 133

[Close]
BLAST of MELO3C023238T2 vs. NCBI nr
Match: gi|659121942|ref|XP_008460893.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 4.6e-67
Identity = 132/161 (81.99%), Postives = 132/161 (81.99%), Query Frame = 1 

Query: 1   METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPY----------------------------IVGSAIGFGVS 120
           VNCFYFWPVLRSRSFPRIRP                             IVGSAIGFGVS
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120

Query: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 134
           MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 161

[Close]
BLAST of MELO3C023238T2 vs. NCBI nr
Match: gi|828315352|ref|XP_012571901.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cicer arietinum])

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 1 

Query: 4   SHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNC 63
           ++NPN N NSNP  + S +P LWPTIDG LGLSEEESV YARRFYKFGFALLP LWAVNC
Sbjct: 8   TNNPNLNLNSNP--LASSVP-LWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNC 67

Query: 64  FYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYN 123
           FYFWPV+R SRSFP IRPY+VGSAIGF +S A++ SWALTFSIGGERLFGPVWD+LVMYN
Sbjct: 68  FYFWPVIRHSRSFPTIRPYVVGSAIGFTISAALLCSWALTFSIGGERLFGPVWDQLVMYN 127

Query: 124 LADKLGLTGWS 134
           LAD+ GLTGWS
Sbjct: 128 LADRFGLTGWS 135

[Close]
BLAST of MELO3C023238T2 vs. NCBI nr
Match: gi|955324463|ref|XP_014631956.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Glycine max])

HSP 1 Score: 215.3 bits (547), Expect = 6.5e-53
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 1 

Query: 6   NPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFY 65
           NPN N N N N++ S +PV WPTIDG LGLSEEESV YARRFYKFGFALLP LWAVNCFY
Sbjct: 10  NPNPNPNRN-NSVASSVPV-WPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFY 69

Query: 66  FWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLA 125
           FWP LR S SFPRIRPY+VGSAIGF V   ++SSWALTF+IGGERLFGPVWD+LVMYNLA
Sbjct: 70  FWPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLA 129

Query: 126 DKLGLTGWS 134
           D+LGLTGWS
Sbjct: 130 DRLGLTGWS 136

[Close]
BLAST of MELO3C023238T2 vs. NCBI nr
Match: gi|571451607|ref|XP_006578788.1| (PREDICTED: probable gamma-secretase subunit PEN-2 isoform X1 [Glycine max])

HSP 1 Score: 214.9 bits (546), Expect = 8.4e-53
Identity = 103/132 (78.03%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 6   NPNANTNSNP---NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVN 65
           NPN N N NP   N++ S +P LWPTIDG LGLSEEESV YARRFY FGFALLP LWAVN
Sbjct: 19  NPNPNPNPNPHRNNSVASSMP-LWPTIDGPLGLSEEESVGYARRFYTFGFALLPLLWAVN 78

Query: 66  CFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY 125
           CFYFWPVLR S SFPRIRPY+VGSAIGF V   ++SSW+LTF+IGGERLFGPVWD+LVMY
Sbjct: 79  CFYFWPVLRHSHSFPRIRPYVVGSAIGFAVCATLLSSWSLTFAIGGERLFGPVWDQLVMY 138

Query: 126 NLADKLGLTGWS 134
           NLAD+LGLTGWS
Sbjct: 139 NLADRLGLTGWS 149

The following BLAST results are available for this feature:
BLAST of MELO3C023238T2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PEN2_ARATH1.1e-4772.31Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana GN=At5g09310 PE=2... [more]
PEN2_BOVIN1.1e-0735.48Gamma-secretase subunit PEN-2 OS=Bos taurus GN=PSENEN PE=3 SV=1[more]
PEN2_HUMAN2.4e-0735.48Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=PSENEN PE=1 SV=1[more]
PEN2_MOUSE4.1e-0735.48Gamma-secretase subunit PEN-2 OS=Mus musculus GN=Psenen PE=1 SV=1[more]
PEN2_RAT5.3e-0734.41Gamma-secretase subunit PEN-2 OS=Rattus norvegicus GN=Psenen PE=3 SV=1[more]
BLAST of MELO3C023238T2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK38_CUCSA1.3e-6895.49Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302290 PE=4 SV=1[more]
A0A0B2PPM2_GLYSO4.5e-5379.84Putative gamma-secretase subunit PEN-2 OS=Glycine soja GN=glysoja_011887 PE=4 SV... [more]
I1KBJ6_SOYBN4.5e-5379.84Uncharacterized protein OS=Glycine max GN=GLYMA_06G153700 PE=4 SV=1[more]
I1JY18_SOYBN5.9e-5378.03Uncharacterized protein OS=Glycine max GN=GLYMA_04G212600 PE=4 SV=1[more]
A0A151SSX1_CAJCA5.9e-5376.12Putative gamma-secretase subunit PEN-2 OS=Cajanus cajan GN=KK1_004232 PE=4 SV=1[more]
BLAST of MELO3C023238T2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09310.16.0e-4972.31 Gamma-secretase aspartyl protease complex, presenilin enhancer-2 sub... [more]
BLAST of MELO3C023238T2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778670219|ref|XP_011649406.1|1.9e-6895.49PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis sativus][more]
gi|659121942|ref|XP_008460893.1|4.6e-6781.99PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo][more]
gi|828315352|ref|XP_012571901.1|1.0e-5379.39PREDICTED: probable gamma-secretase subunit PEN-2 [Cicer arietinum][more]
gi|955324463|ref|XP_014631956.1|6.5e-5379.84PREDICTED: probable gamma-secretase subunit PEN-2 [Glycine max][more]
gi|571451607|ref|XP_006578788.1|8.4e-5378.03PREDICTED: probable gamma-secretase subunit PEN-2 isoform X1 [Glycine max][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019379Gamma_Secretase_Asp_P_PEN2
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005798 Golgi-associated vesicle
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C023238MELO3C023238gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C023238T2MELO3C023238T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C023238T2.cds2MELO3C023238T2.cds2CDS
MELO3C023238T2.cds1MELO3C023238T2.cds1CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPFAMPF10251PEN-2coord: 37..123
score: 8.9
NoneNo IPR availablePANTHERPTHR16318GAMMA-SECRETASE SUBUNIT PEN-2coord: 1..132
score: 1.4