MELO3C021868.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACGAGCAGTACATGGAGAACATCCACTATATGTACAATGTCCCTATTGTACCTGCTCTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCGTGACACTGACACTGACACAAAGCGATCATAGTTACGTTAGTCCAGTAATGATGATTCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGTATATTACAATTCAGAGGCAGGTCGATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGAATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTCGAGCAATCAGATGAGCAACAGCAACAAAAGAATCAAGAGGAAATATAACAACAAAGAGTTCAGAGTCGACGACGACAGCCAGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTTTTTTTCTTTGAATGAAAATTGTTAAATTATTGTATTAAACATTTTGATTCATATTTAATTATTTTACAATCAAAATCACTTACTACAA TAACGAGCAGTACATGGAGAACATCCACTATATGTACAATGTCCCTATTGTACCTGCTCTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCGTGACACTGACACTGACACAAAGCGATCATAGTTACGTTAGTCCAGTAATGATGATTCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGTATATTACAATTCAGAGGCAGGTCGATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGAATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTCGAGCAATCAGATGAGCAACAGCAACAAAAGAATCAAGAGGAAATATAACAACAAAGAGTTCAGAGTCGACGACGACAGCCAGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTTTTTTTCTTTGAATGAAAATTGTTAAATTATTGTATTAAACATTTTGATTCATATTTAATTATTTTACAATCAAAATCACTTACTACAA ATGGAGAACATCCACTATATGTACAATGTCCCTATTGTACCTGCTCTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCGTGACACTGACACTGACACAAAGCGATCATAGTTACGTTAGTCCAGTAATGATGATTCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGTATATTACAATTCAGAGGCAGGTCGATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATACATGAATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTCGAGCAATCAGATGAGCAACAGCAACAAAAGAATCAAGAGGAAATATAA MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYYDLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
BLAST of MELO3C021868.2.1 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 7.2e-25 Identity = 110/138 (79.71%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. NCBI nr
Match: XP_016900498.1 (PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 7.2e-25 Identity = 110/138 (79.71%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. NCBI nr
Match: XP_008461670.1 (PREDICTED: CASP-like protein 4C1 isoform X1 [Cucumis melo]) HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. NCBI nr
Match: XP_008461671.1 (PREDICTED: CASP-like protein 4C1 isoform X2 [Cucumis melo]) HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. TrEMBL
Match: tr|A0A1S3BLK4|A0A1S3BLK4_CUCME (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25 Identity = 110/138 (79.71%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. TrEMBL
Match: tr|A0A1S4DWZ9|A0A1S4DWZ9_CUCME (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25 Identity = 110/138 (79.71%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. TrEMBL
Match: tr|A0A1S3CF98|A0A1S3CF98_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.7e-10 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of MELO3C021868.2.1 vs. TrEMBL
Match: tr|A0A1S3CF42|A0A1S3CF42_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.7e-10 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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