MELO3C021833T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C021833T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine--tRNA ligase
Locationchr11 : 6738045 .. 6738218 (-)
Sequence length174
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGCGGATGATAGAGCATATGGAGTCCATCTCGAGCCTTACTATCACGGAGAGTAGTAAGTGCATCATGATAGTGACAGAGAAGGTGTCGCTCATGAGAAACTTCATCAAGATGTCTGATCCAATGAAGGCTGCTTACTGTAAGGTCCTCTTCTGCGGTGACCCTTAA

mRNA sequence

ATGGCGATGCGGATGATAGAGCATATGGAGTCCATCTCGAGCCTTACTATCACGGAGAGTAGTAAGTGCATCATGATAGTGACAGAGAAGGTGTCGCTCATGAGAAACTTCATCAAGATGTCTGATCCAATGAAGGCTGCTTACTGTAAGGTCCTCTTCTGCGGTGACCCTTAA

Coding sequence (CDS)

ATGGCGATGCGGATGATAGAGCATATGGAGTCCATCTCGAGCCTTACTATCACGGAGAGTAGTAAGTGCATCATGATAGTGACAGAGAAGGTGTCGCTCATGAGAAACTTCATCAAGATGTCTGATCCAATGAAGGCTGCTTACTGTAAGGTCCTCTTCTGCGGTGACCCTTAA

Protein sequence

MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP*
Homology
[Close]
BLAST of MELO3C021833T1 vs. TrEMBL
Match: Q6E437_CUCME (ACT11D09.5 OS=Cucumis melo GN=ACT11D0.5 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.8e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 

Query: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY 49
          MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY 48

[Close]
BLAST of MELO3C021833T1 vs. NCBI nr
Match: gi|46095228|gb|AAS80151.1| (ACT11D09.5 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 

Query: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY 49
          MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY 48

The following BLAST results are available for this feature:
BLAST of MELO3C021833T1 vs. TrEMBL
Match NameE-valueIdentityDescription
Q6E437_CUCME3.8e-17100.00ACT11D09.5 OS=Cucumis melo GN=ACT11D0.5 PE=4 SV=1[more]
BLAST of MELO3C021833T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|46095228|gb|AAS80151.1|5.5e-17100.00ACT11D09.5 [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C021833MELO3C021833gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C021833T1MELO3C021833T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C021833T1.cds1MELO3C021833T1.cds1CDS