MELO3C021117T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C021117T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionputative pentacyclic triterpene synthase 3
Locationchr1 : 26580789 .. 26580971 (-)
Sequence length183
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

mRNA sequence

ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

Coding sequence (CDS)

ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

Protein sequence

MVLFLPESLYISARLHTKATKEKEVEEMDGYPSNEDDDDGDGFDKEMDGYPICIVNIPSI*
Homology
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BLAST of MELO3C021117T1 vs. NCBI nr
Match: gi|659133373|ref|XP_008466698.1| (PREDICTED: probable importin-7 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-09
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1 

Query: 4   FLPESLYISARLHTKATKEKEVEE---MDGYPSNEDDDDGDGFDKEM 48
           F  +SLY+SA LHT+A KE+EVEE   MDGYPS+EDDDDGDG DKEM
Sbjct: 899 FQAKSLYVSAHLHTEAAKEEEVEEDDEMDGYPSDEDDDDGDGSDKEM 945

The following BLAST results are available for this feature:
BLAST of MELO3C021117T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133373|ref|XP_008466698.1|1.5e-0972.34PREDICTED: probable importin-7 homolog isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C021117MELO3C021117gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C021117T1MELO3C021117T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C021117T1.cds1MELO3C021117T1.cds1CDS