MELO3C021117 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021117
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionputative pentacyclic triterpene synthase 3
Locationchr1 : 26580789 .. 26580971 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

mRNA sequence

ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

Coding sequence (CDS)

ATGGTTTTGTTTTTGCCTGAATCCTTGTATATTTCTGCTCGTTTGCACACAAAAGCTACAAAAGAGAAGGAAGTTGAAGAAATGGATGGTTACCCAAGCAATGAAGATGATGATGATGGAGATGGTTTTGATAAGGAAATGGATGGTTACCCAATCTGTATTGTCAATATACCTTCCATTTAA

Protein sequence

MVLFLPESLYISARLHTKATKEKEVEEMDGYPSNEDDDDGDGFDKEMDGYPICIVNIPSI*
Homology
[Close]
BLAST of MELO3C021117 vs. NCBI nr
Match: gi|659133373|ref|XP_008466698.1| (PREDICTED: probable importin-7 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-09
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1 

Query: 4   FLPESLYISARLHTKATKEKEVEE---MDGYPSNEDDDDGDGFDKEM 48
           F  +SLY+SA LHT+A KE+EVEE   MDGYPS+EDDDDGDG DKEM
Sbjct: 899 FQAKSLYVSAHLHTEAAKEEEVEEDDEMDGYPSDEDDDDGDGSDKEM 945

The following BLAST results are available for this feature:
BLAST of MELO3C021117 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133373|ref|XP_008466698.1|1.5e-0972.34PREDICTED: probable importin-7 homolog isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021117T1MELO3C021117T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021117Cucumber (Chinese Long) v3cucmeB539
MELO3C021117Watermelon (97103) v2mewmbB225
MELO3C021117Wax gourdmewgoB256
MELO3C021117Cucumber (Gy14) v1cgymeB637
MELO3C021117Cucurbita maxima (Rimu)cmameB321
MELO3C021117Cucurbita maxima (Rimu)cmameB826
MELO3C021117Cucurbita moschata (Rifu)cmomeB314
MELO3C021117Cucurbita moschata (Rifu)cmomeB810
MELO3C021117Wild cucumber (PI 183967)cpimeB527
MELO3C021117Cucumber (Chinese Long) v2cumeB523
MELO3C021117Watermelon (Charleston Gray)mewcgB177
MELO3C021117Watermelon (97103) v1mewmB200
MELO3C021117Cucurbita pepo (Zucchini)cpemeB119
MELO3C021117Cucurbita pepo (Zucchini)cpemeB294
MELO3C021117Bottle gourd (USVL1VR-Ls)lsimeB187
MELO3C021117Cucumber (Gy14) v2cgybmeB459
MELO3C021117Silver-seed gourdcarmeB0011
MELO3C021117Silver-seed gourdcarmeB0083