MELO3C020993T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTTTGGGTTGACTAATGCCCCTGCAGCCTTCATGAACTTGATGAATCAGGTGTTTCATCCACACTTAGATCAATTTGTTATTGTGTTCATAGATGACATATTGGTTTATTCTGGGAGTAAAGAAAAGCATGCTGAACACCTCAGAATAGGGTTACAGACACTGCGACACCGAGAATTGTATGCTAAATTCAGTAAGTGCGAATTCTGGCTGGATTGGATAGTATTTTTGGTTCATGTGGTTTCAGCAGAAGGCATTTGTGTCGATCCTCGGAAAACTAAAGCAGTAGATAAGTGGGAAAGACCTACCTTCATCACTAAGATCCGAAGTTTTCTTGGTTTAGCGGGGTATTATTGCCGATTTGTAGAAGGGTTTTCAAAATTGGCACTTCCCTTGACCAACCTAACAAGGAAGAATGTGAAGTTTGAATGGACAGATGCTTGTGAATAG ATGCCCTTTGGGTTGACTAATGCCCCTGCAGCCTTCATGAACTTGATGAATCAGGTGTTTCATCCACACTTAGATCAATTTGTTATTGTGTTCATAGATGACATATTGGTTTATTCTGGGAGTAAAGAAAAGCATGCTGAACACCTCAGAATAGGGTTACAGACACTGCGACACCGAGAATTGTATGCTAAATTCAGTAAGTGCGAATTCTGGCTGGATTGGATAGTATTTTTGGTTCATGTGGTTTCAGCAGAAGGCATTTGTGTCGATCCTCGGAAAACTAAAGCAGTAGATAAGTGGGAAAGACCTACCTTCATCACTAAGATCCGAAGTTTTCTTGGTTTAGCGGGGTATTATTGCCGATTTGTAGAAGGGTTTTCAAAATTGGCACTTCCCTTGACCAACCTAACAAGGAAGAATGTGAAGTTTGAATGGACAGATGCTTGTGAATAG ATGCCCTTTGGGTTGACTAATGCCCCTGCAGCCTTCATGAACTTGATGAATCAGGTGTTTCATCCACACTTAGATCAATTTGTTATTGTGTTCATAGATGACATATTGGTTTATTCTGGGAGTAAAGAAAAGCATGCTGAACACCTCAGAATAGGGTTACAGACACTGCGACACCGAGAATTGTATGCTAAATTCAGTAAGTGCGAATTCTGGCTGGATTGGATAGTATTTTTGGTTCATGTGGTTTCAGCAGAAGGCATTTGTGTCGATCCTCGGAAAACTAAAGCAGTAGATAAGTGGGAAAGACCTACCTTCATCACTAAGATCCGAAGTTTTCTTGGTTTAGCGGGGTATTATTGCCGATTTGTAGAAGGGTTTTCAAAATTGGCACTTCCCTTGACCAACCTAACAAGGAAGAATGTGAAGTTTGAATGGACAGATGCTTGTGAATAG MPFGLTNAPAAFMNLMNQVFHPHLDQFVIVFIDDILVYSGSKEKHAEHLRIGLQTLRHRELYAKFSKCEFWLDWIVFLVHVVSAEGICVDPRKTKAVDKWERPTFITKIRSFLGLAGYYCRFVEGFSKLALPLTNLTRKNVKFEWTDACE*
BLAST of MELO3C020993T1 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.2e-27 Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = 1
BLAST of MELO3C020993T1 vs. Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.4e-25 Identity = 52/138 (37.68%), Postives = 85/138 (61.59%), Query Frame = 1
BLAST of MELO3C020993T1 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.4e-24 Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 1
BLAST of MELO3C020993T1 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.2e-20 Identity = 47/146 (32.19%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of MELO3C020993T1 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.2e-20 Identity = 47/146 (32.19%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TrEMBL
Match: A0A061E6T4_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009549 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 9.9e-57 Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TrEMBL
Match: A0A061E507_THECC (Retrotransposon protein OS=Theobroma cacao GN=TCM_009505 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56 Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TrEMBL
Match: A0A061FWW2_THECC (RNA-directed DNA polymerase (Reverse transcriptase) OS=Theobroma cacao GN=TCM_012877 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.9e-56 Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TrEMBL
Match: A0A061GPE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038736 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.9e-56 Identity = 107/150 (71.33%), Postives = 125/150 (83.33%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TrEMBL
Match: A0A061DME7_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_003025 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 8.4e-56 Identity = 106/150 (70.67%), Postives = 124/150 (82.67%), Query Frame = 1
BLAST of MELO3C020993T1 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 1
BLAST of MELO3C020993T1 vs. NCBI nr
Match: gi|590693137|ref|XP_007044250.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao]) HSP 1 Score: 227.6 bits (579), Expect = 1.4e-56 Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. NCBI nr
Match: gi|590693080|ref|XP_007044234.1| (Retrotransposon protein [Theobroma cacao]) HSP 1 Score: 225.7 bits (574), Expect = 5.4e-56 Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. NCBI nr
Match: gi|590665874|ref|XP_007036856.1| (RNA-directed DNA polymerase (Reverse transcriptase) [Theobroma cacao]) HSP 1 Score: 225.3 bits (573), Expect = 7.0e-56 Identity = 107/150 (71.33%), Postives = 126/150 (84.00%), Query Frame = 1
BLAST of MELO3C020993T1 vs. NCBI nr
Match: gi|590580431|ref|XP_007014066.1| (Uncharacterized protein TCM_038736 [Theobroma cacao]) HSP 1 Score: 225.3 bits (573), Expect = 7.0e-56 Identity = 107/150 (71.33%), Postives = 125/150 (83.33%), Query Frame = 1
BLAST of MELO3C020993T1 vs. NCBI nr
Match: gi|590714158|ref|XP_007049837.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao]) HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55 Identity = 106/150 (70.67%), Postives = 124/150 (82.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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