MELO3C020903.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTTATGACACCTCCAGAATGATTGTTTCTAGAGTGAATGTTGATGTCGATGAGAACGTCTACAAAGTTGCTTCCAAGATTGTTGGAGTCAGGGTTCAAAATGTTGTTGACCCTGAAATAGTTGCACTTCTTGATGACTGTAATTTATCGTGA GCTTATGACACCTCCAGAATGATTGTTTCTAGAGTGAATGTTGATGTCGATGAGAACGTCTACAAAGTTGCTTCCAAGATTGTTGGAGTCAGGGTTCAAAATGTTGTTGACCCTGAAATAGTTGCACTTCTTGATGACTGTAATTTATCGTGA ATGATTGTTTCTAGAGTGAATGTTGATGTCGATGAGAACGTCTACAAAGTTGCTTCCAAGATTGTTGGAGTCAGGGTTCAAAATGTTGTTGACCCTGAAATAGTTGCACTTCTTGATGACTGTAATTTATCGTGA MIVSRVNVDVDENVYKVASKIVGVRVQNVVDPEIVALLDDCNLS
BLAST of MELO3C020903.2.1 vs. NCBI nr
Match: XP_008448616.1 (PREDICTED: protein LTV1 homolog [Cucumis melo]) HSP 1 Score: 72.0 bits (175), Expect = 5.6e-10 Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. NCBI nr
Match: XP_004146107.1 (PREDICTED: protein LTV1 homolog isoform X2 [Cucumis sativus] >XP_011650323.1 PREDICTED: protein LTV1 homolog isoform X1 [Cucumis sativus] >KGN55707.1 hypothetical protein Csa_3G006680 [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 9.6e-10 Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. NCBI nr
Match: XP_022940362.1 (protein LTV1 homolog [Cucurbita moschata]) HSP 1 Score: 54.7 bits (130), Expect = 9.3e-05 Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. NCBI nr
Match: XP_022134639.1 (protein LTV1 homolog [Momordica charantia]) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-04 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. NCBI nr
Match: XP_023525399.1 (protein LTV1 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04 Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. TrEMBL
Match: tr|A0A1S3BKZ8|A0A1S3BKZ8_CUCME (protein LTV1 homolog OS=Cucumis melo OX=3656 GN=LOC103490738 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.7e-10 Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0
BLAST of MELO3C020903.2.1 vs. TrEMBL
Match: tr|A0A0A0L517|A0A0A0L517_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006680 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.4e-10 Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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