MELO3C020202T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTAATCGATATCATGTCAAATATCTCACAGTATTTAACATTAAGATCACTTCTCTTTTTGTTGACTATACTATTGGCGTGTTGCTTTAGCCTATTTGATGACAAATTTTTGTCTTGTGCTACTTCATGGTTTTGTATTTTATCTAAGTGTGTTGAAAAGAAGTTAGTGCATTATTTCAATAATTGATTGCTCGTTAAGGATTCCAAGAATGTACTGGTATTTCTTTTTCTGCAATTGAGCCGGCTTCTTCTTAACATTTTATTTAATTTTTTAAACTCGATCAATGATCAGTTTAAGGAGAATTTTAGGAAACAGTCAGAAATTTGGACTTGGTTATTCCAGAGGTTCTGTTGGTTTTTTGAGATAAGATGTCTCTTTCTGTATCATGTTTTCTTAAAAAAACTGTGAATAGTTTTGGCTCATACCTTAGTTGAGTTTCTACATCTTTGTTCCATTAAATTTGGTTCTACCATTTTTACTTTATTTTATTTATTTATTATTCTTTTAAATTTTCTAAGTAAACAACATATTCTTGTTTGTTCCAGTGATCTAAATTGACCAAAATTGAATTTACCTCTTTTATTTTATTTTATTTTTTGGCAAGGTAAATGTGTACCTAATCTTCATTACTGAGTTTCACTTGACCGTGAGAAGAAAGACAAATTTGCTCACTTACGTATGATTATTTAATGCTCTTTTTGTCTTGTTAGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGTTGTTAAACTAAGAGCTAGCCGGTAGCCTGTATCTGATCATGAATTTTATGTCTGCAACCAACTCTACATGATAATACAATTTATTGTATTAAAATATTGATATAAGATTAACTTGACCGTAATCCATTAGTTTAAACTTTTGCATCTATGGGGTTATGGTATCCAAATAGGAGGCTAATGTAGCTTAAATAGCCTCAAGGAGCAATCCTTCAAGAATCAAACTTGTGAGTCTTTTCTTAGAATGAGCTTCTGCAGGGGGAAATTCATATTTATAAAGTTTATTGTAAGTGGGGGGGGGGATAAAAGGGAATTAAACTAGAATAGCCCTATTCATTTTACATCAAATCAAGATAAAGTTGATATGGCGAACAACCTAGTTTTTCTTATTGTGGCCCATTATTTTTATCATCACTTTTTACCTAGTAGTTTATGCCCAACATCTGATGGTACCAGAAAATTACAGTGAAATAATATTCCCAGTGACAAGGACTTGGACAGTTTAATTGTCTTGTGGTCCTCAGTCAATTCTTTTGAGCAAGCCTTCATTTCTTTCCTTGTTATCTTTGCTCTAGTTGTCCCTCAACGATTGCTATTGGTTTCCCTTGCCAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGGTTTGTCTCTAAAGTGAGCCAGTAGACTGCTGTCTTTATTTCATTCGCTAGTATCTCATAAACACATATAACAAGCCAAAATATTCAAATGATTTCACTCTTCAATGCAGGAGAAATTTCTCCTTATTTTGTATGGATGGCTGTCTAAGTCAGTGACGGAATATATTTCATTTTTCTATTTCTACTTTTTGAACTTAAGTTTAATCTAGAGGCACATTCTCTTGCATTTCCTTGCAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATACAATCTCACACAATTTACTTTCGTTATTTATTTTGGTCTTGAAGTTTGCTTGCTTCTATGAAAAATAATAATGGTAACTTTTGACTTTGCCTATCAAGATAATTCATAGCTTTGTAATTTTTTAAAATTTCATCTTAGCATACTATTGTCCTAAATCTTGTATCTCCATTTCCTGCTTCTTTGTATTCTAATGATATCTTTTCTGGTGAAGTTGCTGAAGATCCCTTTTTGGGATAAGAAAAATGGGTGTGGCTTCATGTTCTTGAATAAGAACAAGGATCCTGTGTTATTCCTAATCCTACCGTTCATTGTTGATTCAAAGCAAGCATTTCACAATATTTATGATATGAATCTTAATTGTTTGCATATTTTCTCTAGCTGCTATCTCATTTAAAATGAATGATTTTTTCCCCATTCGAACTTTAAAGGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA MEFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSRKRVFHCIYFVGSRQKRGLMIA*
BLAST of MELO3C020202T1 vs. Swiss-Prot
Match: SYVM2_ARATH (Valine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2247 PE=3 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 4.9e-83 Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1
BLAST of MELO3C020202T1 vs. Swiss-Prot
Match: SYV_CAUCR (Valine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=valS PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.3e-48 Identity = 93/161 (57.76%), Postives = 122/161 (75.78%), Query Frame = 1
BLAST of MELO3C020202T1 vs. Swiss-Prot
Match: SYV_LARHH (Valine--tRNA ligase OS=Laribacter hongkongensis (strain HLHK9) GN=valS PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 5.1e-48 Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 1
BLAST of MELO3C020202T1 vs. Swiss-Prot
Match: SYV_NITEU (Valine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=valS PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.8e-46 Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 1
BLAST of MELO3C020202T1 vs. Swiss-Prot
Match: SYV_CHRVO (Valine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=valS PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.8e-46 Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TrEMBL
Match: A0A0A0LCI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G285540 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 7.6e-91 Identity = 161/165 (97.58%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TrEMBL
Match: A0A067KDU4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13438 PE=3 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 5.0e-82 Identity = 146/164 (89.02%), Postives = 155/164 (94.51%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TrEMBL
Match: B9SYX1_RICCO (Valyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_0013150 PE=3 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81 Identity = 143/164 (87.20%), Postives = 157/164 (95.73%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TrEMBL
Match: V4KUN3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10012577mg PE=3 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 2.5e-81 Identity = 144/164 (87.80%), Postives = 155/164 (94.51%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TrEMBL
Match: A0A072U849_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g027620 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.2e-81 Identity = 141/163 (86.50%), Postives = 157/163 (96.32%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TAIR10
Match: AT5G16715.1 (AT5G16715.1 ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases) HSP 1 Score: 308.5 bits (789), Expect = 2.8e-84 Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1
BLAST of MELO3C020202T1 vs. TAIR10
Match: AT1G14610.1 (AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)) HSP 1 Score: 169.5 bits (428), Expect = 2.0e-42 Identity = 77/154 (50.00%), Postives = 107/154 (69.48%), Query Frame = 1
BLAST of MELO3C020202T1 vs. NCBI nr
Match: gi|659114312|ref|XP_008457006.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of MELO3C020202T1 vs. NCBI nr
Match: gi|659114314|ref|XP_008457007.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of MELO3C020202T1 vs. NCBI nr
Match: gi|659114316|ref|XP_008457008.1| (PREDICTED: valine--tRNA ligase isoform X3 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of MELO3C020202T1 vs. NCBI nr
Match: gi|659114318|ref|XP_008457009.1| (PREDICTED: valine--tRNA ligase isoform X4 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of MELO3C020202T1 vs. NCBI nr
Match: gi|659114322|ref|XP_008457012.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X6 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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