MELO3C020202 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020202
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Valine--tRNA ligase
Location	chr6 : 15814758 .. 15817312 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTAATCGATATCATGTCAAATATCTCACAGTATTTAACATTAAGATCACTTCTCTTTTTGTTGACTATACTATTGGCGTGTTGCTTTAGCCTATTTGATGACAAATTTTTGTCTTGTGCTACTTCATGGTTTTGTATTTTATCTAAGTGTGTTGAAAAGAAGTTAGTGCATTATTTCAATAATTGATTGCTCGTTAAGGATTCCAAGAATGTACTGGTATTTCTTTTTCTGCAATTGAGCCGGCTTCTTCTTAACATTTTATTTAATTTTTTAAACTCGATCAATGATCAGTTTAAGGAGAATTTTAGGAAACAGTCAGAAATTTGGACTTGGTTATTCCAGAGGTTCTGTTGGTTTTTTGAGATAAGATGTCTCTTTCTGTATCATGTTTTCTTAAAAAAACTGTGAATAGTTTTGGCTCATACCTTAGTTGAGTTTCTACATCTTTGTTCCATTAAATTTGGTTCTACCATTTTTACTTTATTTTATTTATTTATTATTCTTTTAAATTTTCTAAGTAAACAACATATTCTTGTTTGTTCCAGTGATCTAAATTGACCAAAATTGAATTTACCTCTTTTATTTTATTTTATTTTTTGGCAAGGTAAATGTGTACCTAATCTTCATTACTGAGTTTCACTTGACCGTGAGAAGAAAGACAAATTTGCTCACTTACGTATGATTATTTAATGCTCTTTTTGTCTTGTTAGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGTTGTTAAACTAAGAGCTAGCCGGTAGCCTGTATCTGATCATGAATTTTATGTCTGCAACCAACTCTACATGATAATACAATTTATTGTATTAAAATATTGATATAAGATTAACTTGACCGTAATCCATTAGTTTAAACTTTTGCATCTATGGGGTTATGGTATCCAAATAGGAGGCTAATGTAGCTTAAATAGCCTCAAGGAGCAATCCTTCAAGAATCAAACTTGTGAGTCTTTTCTTAGAATGAGCTTCTGCAGGGGGAAATTCATATTTATAAAGTTTATTGTAAGTGGGGGGGGGGATAAAAGGGAATTAAACTAGAATAGCCCTATTCATTTTACATCAAATCAAGATAAAGTTGATATGGCGAACAACCTAGTTTTTCTTATTGTGGCCCATTATTTTTATCATCACTTTTTACCTAGTAGTTTATGCCCAACATCTGATGGTACCAGAAAATTACAGTGAAATAATATTCCCAGTGACAAGGACTTGGACAGTTTAATTGTCTTGTGGTCCTCAGTCAATTCTTTTGAGCAAGCCTTCATTTCTTTCCTTGTTATCTTTGCTCTAGTTGTCCCTCAACGATTGCTATTGGTTTCCCTTGCCAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGGTTTGTCTCTAAAGTGAGCCAGTAGACTGCTGTCTTTATTTCATTCGCTAGTATCTCATAAACACATATAACAAGCCAAAATATTCAAATGATTTCACTCTTCAATGCAGGAGAAATTTCTCCTTATTTTGTATGGATGGCTGTCTAAGTCAGTGACGGAATATATTTCATTTTTCTATTTCTACTTTTTGAACTTAAGTTTAATCTAGAGGCACATTCTCTTGCATTTCCTTGCAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATACAATCTCACACAATTTACTTTCGTTATTTATTTTGGTCTTGAAGTTTGCTTGCTTCTATGAAAAATAATAATGGTAACTTTTGACTTTGCCTATCAAGATAATTCATAGCTTTGTAATTTTTTAAAATTTCATCTTAGCATACTATTGTCCTAAATCTTGTATCTCCATTTCCTGCTTCTTTGTATTCTAATGATATCTTTTCTGGTGAAGTTGCTGAAGATCCCTTTTTGGGATAAGAAAAATGGGTGTGGCTTCATGTTCTTGAATAAGAACAAGGATCCTGTGTTATTCCTAATCCTACCGTTCATTGTTGATTCAAAGCAAGCATTTCACAATATTTATGATATGAATCTTAATTGTTTGCATATTTTCTCTAGCTGCTATCTCATTTAAAATGAATGATTTTTTCCCCATTCGAACTTTAAAGGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA

mRNA sequence

ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA

Coding sequence (CDS)

ATGGAATTTTCAGTTGCTGCATCAGCGAATGGTGTTTTTACTTCTCCAGAGATAGCAAAGACGTTTGACTTTGCTTCGGAAGAGCGAATATACAAATGGTGGGAATCTCAAGGGTATTTTAGGCCACATTATGATCAAGATACTGTTCCGTTTGTGATTTCAATGCCACCTCCCAATGTCACAGGATCATTGCACATGGGACATGCGATGTTTGTGACTCTTGAGGATATTATGGTTAGATACAACCGTATGAAGGGAAGACCAACACTCTGGCTTCCTGGGACTGATCATGCAGGTATTGCCACACAGTTGGTTGTTGAAAGAATGCTTGCGTCTGAAGGAATAAAAAGGGTTGAATTGGGTAGAGATGAATTTACAAAGCGAGTTTGGGAGTGGAAAGAGAAGTATGGTGGAACTATCACTAATCAAATTAAGAGACTTGGAGCTTCCTGTGATTGGACTAAAGAGCACTTCACACTTGATGACCAGCTGAGTCGTAAGAGAGTTTTCCATTGCATTTATTTTGTAGGCAGTAGACAGAAAAGAGGGTTAATGATTGCATGA

Protein sequence

MEFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSRKRVFHCIYFVGSRQKRGLMIA*

Homology

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BLAST of MELO3C020202 vs. Swiss-Prot
Match: SYVM2_ARATH (Valine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2247 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.9e-83
Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1


Query: 3   FSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTG 62
           FS AAS N VFTSPE +KTFDF+SEE+IYKWWESQGYF+P++DQ   PFVI MPPPNVTG
Sbjct: 54  FSAAASGNNVFTSPETSKTFDFSSEEKIYKWWESQGYFKPNFDQGGSPFVIPMPPPNVTG 113

Query: 63  SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGR 122
           SLHMGHAMFVTLEDIMVRYNRM GRPTLWLPGTDHAGIATQLVVE+MLASEGIKRV+LGR
Sbjct: 114 SLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRVDLGR 173

Query: 123 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           DEFTKRVWEWKEKYGGTITNQIKRLGASCDW++E FTLD+QLSR
Sbjct: 174 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDEQLSR 217

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BLAST of MELO3C020202 vs. Swiss-Prot
Match: SYV_CAUCR (Valine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=valS PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-48
Identity = 93/161 (57.76%), Postives = 122/161 (75.78%), Query Frame = 1


Query: 18  IAKTFDFAS-EERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLED 77
           + KTFD  S E R+Y  WE+ G F+P  D +  PFVI +PPPNVTGSLH+GHA+  TL+D
Sbjct: 2   LEKTFDPQSVEPRLYAAWEASGAFKPAEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQD 61

Query: 78  IMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEG-IKRVELGRDEFTKRVWEWKEK 137
           ++ R++RM+G+  LWLPGTDHAGIATQ+VVER LA+ G I R ++GR+ F  +VWEWK +
Sbjct: 62  VLTRFHRMRGKAALWLPGTDHAGIATQMVVERQLAAAGNIGRRDMGREAFVDKVWEWKAE 121

Query: 138 YGGTITNQIKRLGASCDWTKEHFTLDDQLSR--KRVFHCIY 175
            GG ITNQ++RLGASCDW++E FTLD+ LS   ++VF  +Y
Sbjct: 122 SGGAITNQLRRLGASCDWSRERFTLDEGLSAAVRKVFVQLY 162

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BLAST of MELO3C020202 vs. Swiss-Prot
Match: SYV_LARHH (Valine--tRNA ligase OS=Laribacter hongkongensis (strain HLHK9) GN=valS PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-48
Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 1


Query: 17  EIAKTFDFAS-EERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLE 76
           E+AK+F+  + E R Y  WE+ GYF+P  D D   F I +PPPNVTG+LHMGHA   T+ 
Sbjct: 2   ELAKSFEPGNIENRWYDRWEAAGYFKPSMDTDRPSFCIQLPPPNVTGTLHMGHAFNQTIM 61

Query: 77  DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEK 136
           D + RY RMKG  TLW+PG DHAGIATQ+VVER LA +G+ R +LGRD F  +VWEWKEK
Sbjct: 62  DGLTRYYRMKGDNTLWVPGADHAGIATQIVVERQLAEQGVSRHDLGRDTFIGKVWEWKEK 121

Query: 137 YGGTITNQIKRLGASCDWTKEHFTLDDQLS 166
            GGTIT+Q++R+G S DW KE+FT+DD++S
Sbjct: 122 SGGTITSQMRRVGCSVDWDKEYFTMDDKMS 151

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BLAST of MELO3C020202 vs. Swiss-Prot
Match: SYV_NITEU (Valine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=valS PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.8e-46
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 1


Query: 17  EIAKTFDFAS-EERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLE 76
           E+AK+FD    E R Y  WE+ GYF P   +   P+ I +PPPNVTG+LHMGHA   TL 
Sbjct: 2   ELAKSFDPKEIETRWYSTWETAGYFSPTDHKGADPYCIMLPPPNVTGTLHMGHAFQHTLM 61

Query: 77  DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEK 136
           D ++RY+RM G  TLW PGTDHAGIATQ+VVER L  EG  R ++GR+ F +RVW+WKE+
Sbjct: 62  DALIRYHRMLGDNTLWQPGTDHAGIATQIVVERQLDQEGKDRRQMGREAFLERVWQWKEE 121

Query: 137 YGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
            G TIT Q++R+GASCDW++E FT+D+ LSR
Sbjct: 122 SGSTITRQMRRMGASCDWSRERFTMDETLSR 152

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BLAST of MELO3C020202 vs. Swiss-Prot
Match: SYV_CHRVO (Valine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=valS PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.8e-46
Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 1


Query: 17  EIAKTFDFAS-EERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVTLE 76
           ++AK+++    E R Y+ WE  GYF+P  D     F I +PPPNVTG+LHMGHA   T+ 
Sbjct: 3   QLAKSYEPGDLERRWYQHWEQAGYFKPSMDTSKPSFAIQLPPPNVTGTLHMGHAFNQTIM 62

Query: 77  DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEK 136
           D + R+ RMKG  TLW+PGTDHAGIATQ+VVER LA +G+ R ++GR+ FT ++WEWKEK
Sbjct: 63  DGLTRFYRMKGHNTLWVPGTDHAGIATQIVVERQLADQGLNRHDMGREAFTSKIWEWKEK 122

Query: 137 YGGTITNQIKRLGASCDWTKEHFTLDD 163
            GGTIT+Q++R+G S DW +E+FT+DD
Sbjct: 123 SGGTITSQMRRVGCSVDWDREYFTMDD 149

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BLAST of MELO3C020202 vs. TrEMBL
Match: A0A0A0LCI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G285540 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.6e-91
Identity = 161/165 (97.58%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPH+DQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHHDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

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BLAST of MELO3C020202 vs. TrEMBL
Match: A0A067KDU4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13438 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.0e-82
Identity = 146/164 (89.02%), Postives = 155/164 (94.51%), Query Frame = 1


Query: 3   FSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTG 62
           F+VAAS NGVFTSPEIAKTFDF+SEERIY WWESQGYF+P+ +Q + PFVISMPPPNVTG
Sbjct: 44  FAVAASENGVFTSPEIAKTFDFSSEERIYNWWESQGYFKPNLEQGSDPFVISMPPPNVTG 103

Query: 63  SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGR 122
           SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKR ELGR
Sbjct: 104 SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRTELGR 163

Query: 123 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           +EF KRVWEWK KYGGTITNQIKRLGASCDW +EHFTLD+QLSR
Sbjct: 164 EEFLKRVWEWKAKYGGTITNQIKRLGASCDWAREHFTLDEQLSR 207

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BLAST of MELO3C020202 vs. TrEMBL
Match: B9SYX1_RICCO (Valyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_0013150 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81
Identity = 143/164 (87.20%), Postives = 157/164 (95.73%), Query Frame = 1


Query: 3   FSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTG 62
           F+VAAS NGVFTSPEIAK+FDF+SEERIY WWESQGYF+P++++ + PFVI MPPPNVTG
Sbjct: 48  FAVAASENGVFTSPEIAKSFDFSSEERIYNWWESQGYFKPNFERGSDPFVIPMPPPNVTG 107

Query: 63  SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGR 122
           SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVE+MLASEGIKR ELGR
Sbjct: 108 SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRTELGR 167

Query: 123 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           +EF +RVWEWKEKYGGTITNQIKRLGASCDWT+EHFTLD+QLSR
Sbjct: 168 EEFVQRVWEWKEKYGGTITNQIKRLGASCDWTREHFTLDEQLSR 211

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BLAST of MELO3C020202 vs. TrEMBL
Match: V4KUN3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10012577mg PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.5e-81
Identity = 144/164 (87.80%), Postives = 155/164 (94.51%), Query Frame = 1


Query: 3   FSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTG 62
           FSV+AS N VFTSPE +KTFDFASEE+IYKWWESQGYF+P ++Q   PFVI MPPPNVTG
Sbjct: 55  FSVSASGNSVFTSPETSKTFDFASEEKIYKWWESQGYFKPSFEQGGSPFVIPMPPPNVTG 114

Query: 63  SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGR 122
           SLHMGHAMFVTLEDIMVRYNRM+GRPTLWLPGTDHAGIATQLVVE+MLASEGIKRVELGR
Sbjct: 115 SLHMGHAMFVTLEDIMVRYNRMRGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRVELGR 174

Query: 123 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           DEFTKRVWEWKEKYGGTITNQIKRLGASCDW++E FTLD+QLSR
Sbjct: 175 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDEQLSR 218

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BLAST of MELO3C020202 vs. TrEMBL
Match: A0A072U849_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g027620 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.2e-81
Identity = 141/163 (86.50%), Postives = 157/163 (96.32%), Query Frame = 1


Query: 4   SVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTGS 63
           + A+  NGVFTSPEIAKTFDFA+EERIY WWESQGYF+P++D+ + PFVISMPPPNVTGS
Sbjct: 58  AAASENNGVFTSPEIAKTFDFAAEERIYNWWESQGYFKPNFDRGSDPFVISMPPPNVTGS 117

Query: 64  LHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRD 123
           LHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVE+GRD
Sbjct: 118 LHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVEIGRD 177

Query: 124 EFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           EFT++VW+WKEKYGGTITNQIKRLGASCDW++EHFTLD+QLS+
Sbjct: 178 EFTRKVWQWKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSQ 220

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BLAST of MELO3C020202 vs. TAIR10
Match: AT5G16715.1 (AT5G16715.1 ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases)

HSP 1 Score: 308.5 bits (789), Expect = 2.8e-84
Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1


Query: 3   FSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVTG 62
           FS AAS N VFTSPE +KTFDF+SEE+IYKWWESQGYF+P++DQ   PFVI MPPPNVTG
Sbjct: 54  FSAAASGNNVFTSPETSKTFDFSSEEKIYKWWESQGYFKPNFDQGGSPFVIPMPPPNVTG 113

Query: 63  SLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGR 122
           SLHMGHAMFVTLEDIMVRYNRM GRPTLWLPGTDHAGIATQLVVE+MLASEGIKRV+LGR
Sbjct: 114 SLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRVDLGR 173

Query: 123 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           DEFTKRVWEWKEKYGGTITNQIKRLGASCDW++E FTLD+QLSR
Sbjct: 174 DEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDEQLSR 217

[Close]

BLAST of MELO3C020202 vs. TAIR10
Match: AT1G14610.1 (AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS))

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-42
Identity = 77/154 (50.00%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 15  SPEIAKTFDFASEERI-YKWWESQGYFRPHYDQDTVPFVISMPPPNVTGSLHMGHAMFVT 74
           S ++AK +  A+ E+  Y WWE    F+        PFVI +PPPNVTG+LH+GHA+   
Sbjct: 133 SSQMAKQYSPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSA 192

Query: 75  LEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVE-RMLASEGIKRVELGRDEFTKRVWEW 134
           +ED ++R+ RM G   LW+PG DHAGIATQ+VVE +++   G+ R ++GR+EF K VW+W
Sbjct: 193 IEDTIIRWKRMSGYNALWVPGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKW 252

Query: 135 KEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           K +YGGTI  Q++RLGAS DW++E FT+D+Q S+
Sbjct: 253 KNQYGGTILTQLRRLGASLDWSRECFTMDEQRSK 286

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BLAST of MELO3C020202 vs. NCBI nr
Match: gi|659114312|ref|XP_008457006.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

[Close]

BLAST of MELO3C020202 vs. NCBI nr
Match: gi|659114314|ref|XP_008457007.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

[Close]

BLAST of MELO3C020202 vs. NCBI nr
Match: gi|659114316|ref|XP_008457008.1| (PREDICTED: valine--tRNA ligase isoform X3 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

[Close]

BLAST of MELO3C020202 vs. NCBI nr
Match: gi|659114318|ref|XP_008457009.1| (PREDICTED: valine--tRNA ligase isoform X4 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

[Close]

BLAST of MELO3C020202 vs. NCBI nr
Match: gi|659114322|ref|XP_008457012.1| (PREDICTED: valine--tRNA ligase, mitochondrial isoform X6 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.9e-91
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 2   EFSVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 61
           + +VAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT
Sbjct: 47  QLAVAASANGVFTSPEIAKTFDFASEERIYKWWESQGYFRPHYDQDTVPFVISMPPPNVT 106

Query: 62  GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 121
           GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG
Sbjct: 107 GSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELG 166

Query: 122 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 167
           RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR
Sbjct: 167 RDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTKEHFTLDDQLSR 211

The following BLAST results are available for this feature:

BLAST of MELO3C020202 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYVM2_ARATH	4.9e-83	87.20	Valine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EM...	[more]
SYV_CAUCR	2.3e-48	57.76	Valine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=valS...	[more]
SYV_LARHH	5.1e-48	59.33	Valine--tRNA ligase OS=Laribacter hongkongensis (strain HLHK9) GN=valS PE=3 SV=1	[more]
SYV_NITEU	4.8e-46	57.62	Valine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN...	[more]
SYV_CHRVO	4.8e-46	55.78	Valine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 ...	[more]

BLAST of MELO3C020202 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCI4_CUCSA	7.6e-91	97.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G285540 PE=4 SV=1	[more]
A0A067KDU4_JATCU	5.0e-82	89.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13438 PE=3 SV=1	[more]
B9SYX1_RICCO	1.4e-81	87.20	Valyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_0013150 PE=3 SV=1	[more]
V4KUN3_EUTSA	2.5e-81	87.80	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10012577mg PE=3 SV=1	[more]
A0A072U849_MEDTR	4.2e-81	86.50	Uncharacterized protein OS=Medicago truncatula GN=MTR_6g027620 PE=3 SV=1	[more]

BLAST of MELO3C020202 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16715.1	2.8e-84	87.20	ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide bi...	[more]
AT1G14610.1	2.0e-42	50.00	valyl-tRNA synthetase / valine--tRNA ligase (VALRS)	[more]

BLAST of MELO3C020202 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114312\|ref\|XP_008457006.1\|	2.9e-91	98.18	PREDICTED: valine--tRNA ligase, mitochondrial isoform X1 [Cucumis melo]	[more]
gi\|659114314\|ref\|XP_008457007.1\|	2.9e-91	98.18	PREDICTED: valine--tRNA ligase, mitochondrial isoform X2 [Cucumis melo]	[more]
gi\|659114316\|ref\|XP_008457008.1\|	2.9e-91	98.18	PREDICTED: valine--tRNA ligase isoform X3 [Cucumis melo]	[more]
gi\|659114318\|ref\|XP_008457009.1\|	2.9e-91	98.18	PREDICTED: valine--tRNA ligase isoform X4 [Cucumis melo]	[more]
gi\|659114322\|ref\|XP_008457012.1\|	2.9e-91	98.18	PREDICTED: valine--tRNA ligase, mitochondrial isoform X6 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001412	aa-tRNA-synth_I_CS
IPR002300	aa-tRNA-synth_Ia
IPR014729	Rossmann-like_a/b/a_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006438	valyl-tRNA aminoacylation
biological_process	GO:0006418	tRNA aminoacylation for protein translation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004832	valine-tRNA ligase activity
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020202T1	MELO3C020202T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 58..69 scor
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 30..170 score: 1.6
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 26..164 score: 1.4
None	No IPR available	PANTHER	PTHR11946	ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES	coord: 9..166 score: 9.3E
None	No IPR available	PANTHER	PTHR11946:SF76	ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE	coord: 9..166 score: 9.3E
None	No IPR available	unknown	SSF52374	Nucleotidylyl transferase	coord: 25..166 score: 7.82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020202	Csa3G285540	Cucumber (Chinese Long) v2	cumeB246
MELO3C020202	Cla013221	Watermelon (97103) v1	mewmB474
MELO3C020202	ClCG05G011510	Watermelon (Charleston Gray)	mewcgB427
MELO3C020202	Cla97C05G093590	Watermelon (97103) v2	mewmbB434
MELO3C020202	Bhi01G001486	Wax gourd	mewgoB539
MELO3C020202	CSPI03G20930	Wild cucumber (PI 183967)	cpimeB243
MELO3C020202	Cucsa.031250	Cucumber (Gy14) v1	cgymeB003
MELO3C020202	CmoCh14G008350	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020202	Lsi05G003600	Bottle gourd (USVL1VR-Ls)	lsimeB385
MELO3C020202	Cp4.1LG03g06250	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C020202	CsGy3G020470	Cucumber (Gy14) v2	cgybmeB212
MELO3C020202	CsaV3_3G020830	Cucumber (Chinese Long) v3	cucmeB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020202	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020202	Silver-seed gourd	carmeB0485
MELO3C020202	Watermelon (97103) v2	mewmbB444
MELO3C020202	Wax gourd	mewgoB542
MELO3C020202	Cucurbita maxima (Rimu)	cmameB243
MELO3C020202	Cucurbita maxima (Rimu)	cmameB431
MELO3C020202	Cucurbita moschata (Rifu)	cmomeB229
MELO3C020202	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020202	Watermelon (Charleston Gray)	mewcgB434
MELO3C020202	Watermelon (97103) v1	mewmB461
MELO3C020202	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020202	Cucurbita pepo (Zucchini)	cpemeB583